RNA–Protein interactions for RNA: ENST00000354325.2

TRERF1-202, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,138 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-202ENST00000354325 ARAP1Q96P48 1450 aa16.95■□□□□ 0.3
TRERF1-202ENST00000354325 TONSLQ96HA7 1378 aa16.94■□□□□ 0.3
TRERF1-202ENST00000354325 KIF27Q86VH2 1401 aa16.94■□□□□ 0.3
TRERF1-202ENST00000354325 HNRNPUQ00839 825 aaKnown RBP eCLIP16.93■□□□□ 0.3
TRERF1-202ENST00000354325 PRXQ9BXM0 1461 aa16.92■□□□□ 0.3
TRERF1-202ENST00000354325 FAM50AQ14320 339 aaKnown RBP16.91■□□□□ 0.3
TRERF1-202ENST00000354325 PEG3Q9GZU2 1588 aa16.9■□□□□ 0.3
TRERF1-202ENST00000354325 DEKP35659 375 aaKnown RBP16.88■□□□□ 0.29
TRERF1-202ENST00000354325 TOP2BQ02880 1626 aa16.87■□□□□ 0.29
TRERF1-202ENST00000354325 MAP3K1Q13233 1512 aa16.87■□□□□ 0.29
TRERF1-202ENST00000354325 ANP32AP39687 249 aaKnown RBP16.86■□□□□ 0.29
TRERF1-202ENST00000354325 MSH5O43196 834 aa16.84■□□□□ 0.29
TRERF1-202ENST00000354325 NOP58Q9Y2X3 529 aaKnown RBP16.84■□□□□ 0.29
TRERF1-202ENST00000354325 FHAD1B1AJZ9 1412 aa16.83■□□□□ 0.28
TRERF1-202ENST00000354325 MAPKBP1O60336 1514 aa16.82■□□□□ 0.28
TRERF1-202ENST00000354325 SIN3AQ96ST3 1273 aa16.81■□□□□ 0.28
TRERF1-202ENST00000354325 WDR97A6NE52 1622 aa16.8■□□□□ 0.28
TRERF1-202ENST00000354325 ATAD2BQ9ULI0 1458 aa16.75■□□□□ 0.27
TRERF1-202ENST00000354325 BIVM-ERCC5R4GMW8 1640 aa16.75■□□□□ 0.27
TRERF1-202ENST00000354325 ARHGAP35Q9NRY4 1499 aa16.73■□□□□ 0.27
TRERF1-202ENST00000354325 ZBTB47Q9UFB7 747 aaPredicted RBP16.73■□□□□ 0.27
TRERF1-202ENST00000354325 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.73■□□□□ 0.27
TRERF1-202ENST00000354325 TIAM1Q13009 1591 aa16.73■□□□□ 0.27
TRERF1-202ENST00000354325 P3H3Q8IVL6 736 aa16.72■□□□□ 0.27
TRERF1-202ENST00000354325 IRX6P78412 446 aaPredicted RBP16.71■□□□□ 0.27
TRERF1-202ENST00000354325 LRRC9Q6ZRR7 1453 aa16.71■□□□□ 0.27
TRERF1-202ENST00000354325 HIRIP3Q9BW71 556 aaPredicted RBP16.69■□□□□ 0.26
TRERF1-202ENST00000354325 EIF4G2P78344 907 aaKnown RBP eCLIP16.67■□□□□ 0.26
TRERF1-202ENST00000354325 NBR1Q14596 966 aa16.67■□□□□ 0.26
TRERF1-202ENST00000354325 PRKCSHP14314 528 aaPredicted RBP16.65■□□□□ 0.26
TRERF1-202ENST00000354325 ZBED9Q6R2W3 1325 aa16.64■□□□□ 0.25
TRERF1-202ENST00000354325 CCDC136Q96JN2 1154 aa16.64■□□□□ 0.25
TRERF1-202ENST00000354325 IPO9Q96P70 1041 aaKnown RBP16.63■□□□□ 0.25
TRERF1-202ENST00000354325 MRS2Q9HD23 443 aa16.63■□□□□ 0.25
TRERF1-202ENST00000354325 PHLDB1Q86UU1 1377 aa16.61■□□□□ 0.25
TRERF1-202ENST00000354325 B4GALNT3Q6L9W6 998 aa16.61■□□□□ 0.25
TRERF1-202ENST00000354325 UACAQ9BZF9 1416 aa16.61■□□□□ 0.25
TRERF1-202ENST00000354325 USP35Q9P2H5 1018 aa16.6■□□□□ 0.25
TRERF1-202ENST00000354325 FAM9BQ8IZU0 186 aa16.59■□□□□ 0.25
TRERF1-202ENST00000354325 UNC13AQ9UPW8 1703 aa16.58■□□□□ 0.24
TRERF1-202ENST00000354325 PPM1GO15355 546 aaPredicted RBP16.57■□□□□ 0.24
TRERF1-202ENST00000354325 ARID3CA6NKF2 412 aa16.57■□□□□ 0.24
TRERF1-202ENST00000354325 CARMIL1Q5VZK9 1371 aa16.57■□□□□ 0.24
TRERF1-202ENST00000354325 CCDC18Q5T9S5 1454 aa16.57■□□□□ 0.24
TRERF1-202ENST00000354325 FBLN2P98095 1184 aa16.55■□□□□ 0.24
TRERF1-202ENST00000354325 CNTLNQ9NXG0 1405 aa16.55■□□□□ 0.24
TRERF1-202ENST00000354325 HSPA5P11021 654 aaKnown RBP16.54■□□□□ 0.24
TRERF1-202ENST00000354325 FMN1Q68DA7 1419 aa16.54■□□□□ 0.24
TRERF1-202ENST00000354325 MTUS2Q5JR59 1369 aa16.52■□□□□ 0.24
TRERF1-202ENST00000354325 FYCO1Q9BQS8 1478 aa16.51■□□□□ 0.23
TRERF1-202ENST00000354325 DAXXQ9UER7 740 aaPredicted RBP16.51■□□□□ 0.23
TRERF1-202ENST00000354325 HFM1A2PYH4 1435 aa16.51■□□□□ 0.23
TRERF1-202ENST00000354325 CUX1P39880 1505 aa16.5■□□□□ 0.23
TRERF1-202ENST00000354325 PRKRIP1Q9H875 184 aaPredicted RBP16.5■□□□□ 0.23
TRERF1-202ENST00000354325 DDRGK1Q96HY6 314 aa16.49■□□□□ 0.23
TRERF1-202ENST00000354325 FGD6Q6ZV73 1430 aa16.48■□□□□ 0.23
TRERF1-202ENST00000354325 IGF1RP08069 1367 aa16.48■□□□□ 0.23
TRERF1-202ENST00000354325 CFAP43Q8NDM7 1665 aa16.48■□□□□ 0.23
TRERF1-202ENST00000354325 NUDCQ9Y266 331 aa16.48■□□□□ 0.23
TRERF1-202ENST00000354325 AQRO60306 1485 aaKnown RBP eCLIP16.47■□□□□ 0.23
TRERF1-202ENST00000354325 BICRAQ9NZM4 1560 aa16.47■□□□□ 0.23
TRERF1-202ENST00000354325 TCERG1O14776 1098 aaKnown RBP16.46■□□□□ 0.23
TRERF1-202ENST00000354325 CASKIN1Q8WXD9 1431 aa16.46■□□□□ 0.23
TRERF1-202ENST00000354325 EFCAB5A4FU69 1503 aa16.46■□□□□ 0.22
TRERF1-202ENST00000354325 SMG6Q86US8 1419 aaKnown RBP16.46■□□□□ 0.22
TRERF1-202ENST00000354325 WASHC2AQ641Q2 1341 aa16.45■□□□□ 0.22
TRERF1-202ENST00000354325 NCOA2Q15596 1464 aa16.42■□□□□ 0.22
TRERF1-202ENST00000354325 CCDC7Q96M83 1385 aa16.42■□□□□ 0.22
TRERF1-202ENST00000354325 NEFMP07197 916 aa16.41■□□□□ 0.22
TRERF1-202ENST00000354325 PAK3O75914 559 aaPredicted RBP16.41■□□□□ 0.22
TRERF1-202ENST00000354325 FGD5Q6ZNL6 1462 aa16.4■□□□□ 0.22
TRERF1-202ENST00000354325 HMGXB3Q12766 1538 aa16.4■□□□□ 0.22
TRERF1-202ENST00000354325 MS4A1P11836 297 aa16.38■□□□□ 0.21
TRERF1-202ENST00000354325 PCF11O94913 1555 aaKnown RBP16.38■□□□□ 0.21
TRERF1-202ENST00000354325 CFTRP13569 1480 aa16.38■□□□□ 0.21
TRERF1-202ENST00000354325 NCAPD3P42695 1498 aa16.37■□□□□ 0.21
TRERF1-202ENST00000354325 NPM2Q86SE8 214 aaKnown RBP16.37■□□□□ 0.21
TRERF1-202ENST00000354325 PTPN23Q9H3S7 1636 aa16.36■□□□□ 0.21
TRERF1-202ENST00000354325 NCOA1Q15788 1441 aa16.35■□□□□ 0.21
TRERF1-202ENST00000354325 TMC1Q8TDI8 760 aa16.34■□□□□ 0.21
TRERF1-202ENST00000354325 MYOM3Q5VTT5 1437 aa16.34■□□□□ 0.21
TRERF1-202ENST00000354325 NAIPQ13075 1403 aa16.34■□□□□ 0.21
TRERF1-202ENST00000354325 ANO8Q9HCE9 1232 aaPredicted RBP16.34■□□□□ 0.21
TRERF1-202ENST00000354325 FHOD3Q2V2M9 1422 aa16.33■□□□□ 0.2
TRERF1-202ENST00000354325 ARID4BQ4LE39 1312 aaPredicted RBP16.33■□□□□ 0.2
TRERF1-202ENST00000354325 CNGB1Q14028 1251 aaPredicted RBP16.32■□□□□ 0.2
TRERF1-202ENST00000354325 ROCK2O75116 1388 aaKnown RBP16.31■□□□□ 0.2
TRERF1-202ENST00000354325 C11orf95C9JLR9 678 aaPredicted RBP16.3■□□□□ 0.2
TRERF1-202ENST00000354325 RNF123Q5XPI4 1314 aa16.3■□□□□ 0.2
TRERF1-202ENST00000354325 AKNAQ7Z591 1439 aa16.29■□□□□ 0.2
TRERF1-202ENST00000354325 L3MBTL2Q969R5 705 aa16.28■□□□□ 0.2
TRERF1-202ENST00000354325 POLR3GLQ9BT43 218 aa16.28■□□□□ 0.2
TRERF1-202ENST00000354325 PDE3BQ13370 1112 aa16.28■□□□□ 0.2
TRERF1-202ENST00000354325 MPHOSPH9Q99550 1183 aa16.27■□□□□ 0.2
TRERF1-202ENST00000354325 RRP7BPQ9NSQ0 103 aa16.27■□□□□ 0.2
TRERF1-202ENST00000354325 SALL2Q9Y467 1007 aaPredicted RBP16.26■□□□□ 0.19
TRERF1-202ENST00000354325 LAS1LQ9Y4W2 734 aaKnown RBP16.26■□□□□ 0.19
TRERF1-202ENST00000354325 PDE4AP27815 886 aa16.26■□□□□ 0.19
TRERF1-202ENST00000354325 KTN1Q86UP2 1357 aaKnown RBP16.25■□□□□ 0.19
TRERF1-202ENST00000354325 GLIPR1L2Q4G1C9 344 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms