RNA–Protein interactions for RNA: ENST00000353909.7

MBD1-205, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-205ENST00000353909 CTTNBP2Q8WZ74 1663 aa23.38■■□□□ 1.33
MBD1-205ENST00000353909 TIAM1Q13009 1591 aa23.38■■□□□ 1.33
MBD1-205ENST00000353909 RRBP1Q9P2E9 1410 aaKnown RBP23.36■■□□□ 1.33
MBD1-205ENST00000353909 PCF11O94913 1555 aaKnown RBP23.35■■□□□ 1.33
MBD1-205ENST00000353909 MRC2Q9UBG0 1479 aa23.35■■□□□ 1.33
MBD1-205ENST00000353909 AQRO60306 1485 aaKnown RBP eCLIP23.35■■□□□ 1.336e-7■■■□□ 18.9
MBD1-205ENST00000353909 FHAD1B1AJZ9 1412 aa23.33■■□□□ 1.33
MBD1-205ENST00000353909 CCNB3Q8WWL7 1395 aa23.3■■□□□ 1.32
MBD1-205ENST00000353909 LRRC9Q6ZRR7 1453 aa23.29■■□□□ 1.32
MBD1-205ENST00000353909 EFCAB5A4FU69 1503 aa23.29■■□□□ 1.32
MBD1-205ENST00000353909 MAP3K1Q13233 1512 aa23.29■■□□□ 1.32
MBD1-205ENST00000353909 ITGAEP38570 1179 aa23.29■■□□□ 1.32
MBD1-205ENST00000353909 ZNF608Q9ULD9 1512 aaPredicted RBP23.24■■□□□ 1.31
MBD1-205ENST00000353909 PHLDB1Q86UU1 1377 aa23.24■■□□□ 1.31
MBD1-205ENST00000353909 PBRM1Q86U86 1689 aa23.23■■□□□ 1.31
MBD1-205ENST00000353909 CASKIN1Q8WXD9 1431 aa23.21■■□□□ 1.31
MBD1-205ENST00000353909 CFAP43Q8NDM7 1665 aa23.21■■□□□ 1.31
MBD1-205ENST00000353909 FYCO1Q9BQS8 1478 aa23.21■■□□□ 1.31
MBD1-205ENST00000353909 SAMD9Q5K651 1589 aa23.18■■□□□ 1.3
MBD1-205ENST00000353909 WDR62O43379 1518 aa23.18■■□□□ 1.3
MBD1-205ENST00000353909 SNAPC4Q5SXM2 1469 aa23.17■■□□□ 1.3
MBD1-205ENST00000353909 FMN1Q68DA7 1419 aa23.16■■□□□ 1.3
MBD1-205ENST00000353909 DHX57Q6P158 1386 aaKnown RBP23.16■■□□□ 1.3
MBD1-205ENST00000353909 ADAMTS12P58397 1594 aa23.14■■□□□ 1.3
MBD1-205ENST00000353909 ERCC6Q03468 1493 aa23.14■■□□□ 1.29
MBD1-205ENST00000353909 GRIN2BQ13224 1484 aa23.14■■□□□ 1.29
MBD1-205ENST00000353909 IFT140Q96RY7 1462 aa23.13■■□□□ 1.29
MBD1-205ENST00000353909 FAM50AQ14320 339 aaKnown RBP23.11■■□□□ 1.29
MBD1-205ENST00000353909 LRRIQ1Q96JM4 1722 aa23.09■■□□□ 1.29
MBD1-205ENST00000353909 DIEXFQ68CQ4 756 aaKnown RBP23.04■■□□□ 1.28
MBD1-205ENST00000353909 IQGAP2Q13576 1575 aa23.04■■□□□ 1.28
MBD1-205ENST00000353909 RAB3GAP2Q9H2M9 1393 aa23.02■■□□□ 1.28
MBD1-205ENST00000353909 THOC2Q8NI27 1593 aaKnown RBP23.02■■□□□ 1.28
MBD1-205ENST00000353909 EIF4G3O43432 1585 aaKnown RBP23.01■■□□□ 1.27
MBD1-205ENST00000353909 ZNF316A6NFI3 1004 aaPredicted RBP23.01■■□□□ 1.27
MBD1-205ENST00000353909 MTUS2Q5JR59 1369 aa23.01■■□□□ 1.27
MBD1-205ENST00000353909 CLSPNQ9HAW4 1339 aa22.97■■□□□ 1.27
MBD1-205ENST00000353909 ARID3CA6NKF2 412 aa22.95■■□□□ 1.27
MBD1-205ENST00000353909 SETD5Q9C0A6 1442 aa22.93■■□□□ 1.26
MBD1-205ENST00000353909 FGD6Q6ZV73 1430 aa22.92■■□□□ 1.26
MBD1-205ENST00000353909 MAGI3Q5TCQ9 1506 aa22.92■■□□□ 1.26
MBD1-205ENST00000353909 GRIN2AQ12879 1464 aa22.92■■□□□ 1.26
MBD1-205ENST00000353909 NCOA2Q15596 1464 aa22.9■■□□□ 1.26
MBD1-205ENST00000353909 UGGT2Q9NYU1 1516 aa22.89■■□□□ 1.25
MBD1-205ENST00000353909 FBLN2P98095 1184 aa22.88■■□□□ 1.25
MBD1-205ENST00000353909 KIAA0586Q9BVV6 1533 aa22.88■■□□□ 1.25
MBD1-205ENST00000353909 CDK13Q14004 1512 aaKnown RBP22.86■■□□□ 1.25
MBD1-205ENST00000353909 DISP1Q96F81 1524 aa22.86■■□□□ 1.25
MBD1-205ENST00000353909 CHMP7Q8WUX9 453 aaPredicted RBP22.86■■□□□ 1.25
MBD1-205ENST00000353909 MAPKBP1O60336 1514 aa22.85■■□□□ 1.25
MBD1-205ENST00000353909 EPRSP07814 1512 aaKnown RBP22.84■■□□□ 1.25
MBD1-205ENST00000353909 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.84■■□□□ 1.25
MBD1-205ENST00000353909 PTPRKQ15262 1439 aa22.84■■□□□ 1.25
MBD1-205ENST00000353909 EHBP1L1Q8N3D4 1523 aa22.83■■□□□ 1.25
MBD1-205ENST00000353909 HECW1Q76N89 1606 aa22.83■■□□□ 1.24
MBD1-205ENST00000353909 MYOM3Q5VTT5 1437 aa22.82■■□□□ 1.24
MBD1-205ENST00000353909 SUPT6HQ7KZ85 1726 aaKnown RBP22.82■■□□□ 1.24
MBD1-205ENST00000353909 MAGI1Q96QZ7 1491 aaPredicted RBP22.81■■□□□ 1.24
MBD1-205ENST00000353909 CCDC18Q5T9S5 1454 aa22.81■■□□□ 1.24
MBD1-205ENST00000353909 KIAA0556O60303 1618 aa22.8■■□□□ 1.24
MBD1-205ENST00000353909 CEP170Q5SW79 1584 aa22.79■■□□□ 1.24
MBD1-205ENST00000353909 SYNJ2O15056 1496 aa22.79■■□□□ 1.24
MBD1-205ENST00000353909 ARHGEF11O15085 1522 aa22.76■■□□□ 1.23
MBD1-205ENST00000353909 SIN3AQ96ST3 1273 aa22.75■■□□□ 1.23
MBD1-205ENST00000353909 PTPN23Q9H3S7 1636 aa22.72■■□□□ 1.23
MBD1-205ENST00000353909 NUP153P49790 1475 aaKnown RBP22.71■■□□□ 1.23
MBD1-205ENST00000353909 NEUROD1Q13562 356 aa22.69■■□□□ 1.22
MBD1-205ENST00000353909 JPH4Q96JJ6 628 aa22.67■■□□□ 1.22
MBD1-205ENST00000353909 NUP160Q12769 1436 aa22.67■■□□□ 1.22
MBD1-205ENST00000353909 MIER1Q8N108 512 aa22.67■■□□□ 1.22
MBD1-205ENST00000353909 CHIC2Q9UKJ5 165 aa22.67■■□□□ 1.22
MBD1-205ENST00000353909 HFM1A2PYH4 1435 aa22.66■■□□□ 1.22
MBD1-205ENST00000353909 RAPGEF6Q8TEU7 1601 aa22.65■■□□□ 1.22
MBD1-205ENST00000353909 PLB1Q6P1J6 1458 aa22.65■■□□□ 1.22
MBD1-205ENST00000353909 NAIPQ13075 1403 aa22.65■■□□□ 1.22
MBD1-205ENST00000353909 RRP7BPQ9NSQ0 103 aa22.63■■□□□ 1.21
MBD1-205ENST00000353909 TCOF1Q13428 1488 aaKnown RBP22.61■■□□□ 1.21
MBD1-205ENST00000353909 ZNF644Q9H582 1327 aaPredicted RBP22.57■■□□□ 1.2
MBD1-205ENST00000353909 PRG4Q92954 1404 aaPredicted RBP22.57■■□□□ 1.2
MBD1-205ENST00000353909 MIA2Q96PC5 1412 aa22.55■■□□□ 1.2
MBD1-205ENST00000353909 CARMIL2Q6F5E8 1435 aa22.55■■□□□ 1.2
MBD1-205ENST00000353909 UACAQ9BZF9 1416 aa22.54■■□□□ 1.2
MBD1-205ENST00000353909 SCAF1Q9H7N4 1312 aaKnown RBP22.53■■□□□ 1.2
MBD1-205ENST00000353909 CDK11AQ9UQ88 783 aaPredicted RBP22.52■■□□□ 1.2
MBD1-205ENST00000353909 KDM6BO15054 1643 aa22.5■■□□□ 1.19
MBD1-205ENST00000353909 YTHDC1Q96MU7 727 aaKnown RBP22.49■■□□□ 1.19
MBD1-205ENST00000353909 TROQ12816 1431 aaPredicted RBP22.48■■□□□ 1.19
MBD1-205ENST00000353909 ACIN1Q9UKV3 1341 aaKnown RBP22.47■■□□□ 1.19
MBD1-205ENST00000353909 KIF14Q15058 1648 aa22.45■■□□□ 1.18
MBD1-205ENST00000353909 GCC2Q8IWJ2 1684 aa22.43■■□□□ 1.18
MBD1-205ENST00000353909 DAPK1P53355 1430 aa22.43■■□□□ 1.18
MBD1-205ENST00000353909 PPP1R15AO75807 674 aaPredicted RBP22.43■■□□□ 1.18
MBD1-205ENST00000353909 TRIM52Q96A61 297 aa22.43■■□□□ 1.18
MBD1-205ENST00000353909 ABCC5O15440 1437 aa22.43■■□□□ 1.18
MBD1-205ENST00000353909 CHD1O14646 1710 aa22.42■■□□□ 1.18
MBD1-205ENST00000353909 DENND4BO75064 1496 aaPredicted RBP22.41■■□□□ 1.18
MBD1-205ENST00000353909 ABCA8O94911 1581 aa22.41■■□□□ 1.18
MBD1-205ENST00000353909 CFDP1Q9UEE9 299 aaPredicted RBP22.4■■□□□ 1.18
MBD1-205ENST00000353909 TIMELESSQ9UNS1 1208 aa22.4■■□□□ 1.18
MBD1-205ENST00000353909 ZNF777Q9ULD5 760 aaPredicted RBP22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms