RNA–Protein interactions for RNA: ENST00000353662.4

ACAP3-201, Transcript of ArfGAP with coiled-coil, ankyrin repeat and PH domains 3, humanhuman

TSL 1 (best) BASIC

Gene ACAP3, Length 2,280 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAP3-201ENST00000353662 CTTNBP2Q8WZ74 1663 aa30.3■■■□□ 2.44
ACAP3-201ENST00000353662 CCER1Q8TC90 406 aaPredicted RBP30.3■■■□□ 2.44
ACAP3-201ENST00000353662 HNRNPUL2Q1KMD3 747 aaKnown RBP30.27■■■□□ 2.44
ACAP3-201ENST00000353662 PBRM1Q86U86 1689 aa30.25■■■□□ 2.43
ACAP3-201ENST00000353662 FHOD3Q2V2M9 1422 aa30.25■■■□□ 2.43
ACAP3-201ENST00000353662 IFT140Q96RY7 1462 aa30.22■■■□□ 2.43
ACAP3-201ENST00000353662 ZNF608Q9ULD9 1512 aaPredicted RBP30.22■■■□□ 2.43
ACAP3-201ENST00000353662 EFCAB5A4FU69 1503 aa30.18■■■□□ 2.42
ACAP3-201ENST00000353662 FHAD1B1AJZ9 1412 aa30.17■■■□□ 2.42
ACAP3-201ENST00000353662 GRIN2BQ13224 1484 aa30.15■■■□□ 2.42
ACAP3-201ENST00000353662 ATP1B4Q9UN42 357 aaPredicted RBP30.15■■■□□ 2.42
ACAP3-201ENST00000353662 PCF11O94913 1555 aaKnown RBP30.13■■■□□ 2.41
ACAP3-201ENST00000353662 THOC2Q8NI27 1593 aaKnown RBP30.13■■■□□ 2.41
ACAP3-201ENST00000353662 TIAM1Q13009 1591 aa30.12■■■□□ 2.41
ACAP3-201ENST00000353662 ADAMTS12P58397 1594 aa30.11■■■□□ 2.41
ACAP3-201ENST00000353662 MAP3K1Q13233 1512 aa30.05■■■□□ 2.4
ACAP3-201ENST00000353662 SAMD9Q5K651 1589 aa30.02■■■□□ 2.4
ACAP3-201ENST00000353662 EIF4G3O43432 1585 aaKnown RBP30.01■■■□□ 2.39
ACAP3-201ENST00000353662 LRRC9Q6ZRR7 1453 aa30■■■□□ 2.39
ACAP3-201ENST00000353662 FYCO1Q9BQS8 1478 aa29.99■■■□□ 2.39
ACAP3-201ENST00000353662 CASKIN1Q8WXD9 1431 aa29.99■■■□□ 2.39
ACAP3-201ENST00000353662 SNAPC4Q5SXM2 1469 aa29.98■■■□□ 2.39
ACAP3-201ENST00000353662 RRBP1Q9P2E9 1410 aaKnown RBP29.98■■■□□ 2.39
ACAP3-201ENST00000353662 FMN1Q68DA7 1419 aa29.98■■■□□ 2.39
ACAP3-201ENST00000353662 CFAP43Q8NDM7 1665 aa29.96■■■□□ 2.39
ACAP3-201ENST00000353662 CCNB3Q8WWL7 1395 aa29.92■■■□□ 2.38
ACAP3-201ENST00000353662 IQGAP2Q13576 1575 aa29.92■■■□□ 2.38
ACAP3-201ENST00000353662 PHLDB1Q86UU1 1377 aa29.85■■■□□ 2.37
ACAP3-201ENST00000353662 ITGAEP38570 1179 aa29.83■■■□□ 2.37
ACAP3-201ENST00000353662 GRIN2AQ12879 1464 aa29.82■■■□□ 2.36
ACAP3-201ENST00000353662 MAGI1Q96QZ7 1491 aaPredicted RBP29.78■■■□□ 2.36
ACAP3-201ENST00000353662 CHMP7Q8WUX9 453 aaPredicted RBP29.78■■■□□ 2.36
ACAP3-201ENST00000353662 FBLN2P98095 1184 aa29.77■■■□□ 2.36
ACAP3-201ENST00000353662 LRRIQ1Q96JM4 1722 aa29.75■■■□□ 2.35
ACAP3-201ENST00000353662 KIAA0586Q9BVV6 1533 aa29.75■■■□□ 2.35
ACAP3-201ENST00000353662 UGGT2Q9NYU1 1516 aa29.73■■■□□ 2.35
ACAP3-201ENST00000353662 SYNJ2O15056 1496 aa29.72■■■□□ 2.35
ACAP3-201ENST00000353662 MTUS2Q5JR59 1369 aa29.71■■■□□ 2.35
ACAP3-201ENST00000353662 FAM50AQ14320 339 aaKnown RBP29.71■■■□□ 2.35
ACAP3-201ENST00000353662 CEP170Q5SW79 1584 aa29.64■■■□□ 2.34
ACAP3-201ENST00000353662 DISP1Q96F81 1524 aa29.63■■■□□ 2.33
ACAP3-201ENST00000353662 ARID3CA6NKF2 412 aa29.61■■■□□ 2.33
ACAP3-201ENST00000353662 KIAA0556O60303 1618 aa29.61■■■□□ 2.33
ACAP3-201ENST00000353662 HECW1Q76N89 1606 aa29.6■■■□□ 2.33
ACAP3-201ENST00000353662 DHX57Q6P158 1386 aaKnown RBP29.58■■■□□ 2.33
ACAP3-201ENST00000353662 CCDC18Q5T9S5 1454 aa29.57■■■□□ 2.32
ACAP3-201ENST00000353662 MAGI3Q5TCQ9 1506 aa29.54■■■□□ 2.32
ACAP3-201ENST00000353662 EPRSP07814 1512 aaKnown RBP29.54■■■□□ 2.32
ACAP3-201ENST00000353662 NCOA2Q15596 1464 aa29.54■■■□□ 2.32
ACAP3-201ENST00000353662 EHBP1L1Q8N3D4 1523 aa29.53■■■□□ 2.32
ACAP3-201ENST00000353662 CDK13Q14004 1512 aaKnown RBP29.53■■■□□ 2.32
ACAP3-201ENST00000353662 NUP160Q12769 1436 aa29.52■■■□□ 2.32
ACAP3-201ENST00000353662 FGD6Q6ZV73 1430 aa29.52■■■□□ 2.32
ACAP3-201ENST00000353662 SUPT6HQ7KZ85 1726 aaKnown RBP29.49■■■□□ 2.31
ACAP3-201ENST00000353662 RAB3GAP2Q9H2M9 1393 aa29.49■■■□□ 2.31
ACAP3-201ENST00000353662 JPH4Q96JJ6 628 aa29.46■■■□□ 2.31
ACAP3-201ENST00000353662 MYOM3Q5VTT5 1437 aa29.44■■■□□ 2.3
ACAP3-201ENST00000353662 SETD5Q9C0A6 1442 aa29.43■■■□□ 2.3
ACAP3-201ENST00000353662 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.43■■■□□ 2.32e-6■■■□□ 17.8
ACAP3-201ENST00000353662 RAPGEF6Q8TEU7 1601 aa29.39■■■□□ 2.3
ACAP3-201ENST00000353662 CLSPNQ9HAW4 1339 aa29.39■■■□□ 2.3
ACAP3-201ENST00000353662 NUP153P49790 1475 aaKnown RBP29.39■■■□□ 2.29
ACAP3-201ENST00000353662 ARHGEF11O15085 1522 aa29.38■■■□□ 2.29
ACAP3-201ENST00000353662 CARMIL2Q6F5E8 1435 aa29.37■■■□□ 2.29
ACAP3-201ENST00000353662 PLB1Q6P1J6 1458 aa29.33■■■□□ 2.29
ACAP3-201ENST00000353662 PTPRKQ15262 1439 aa29.3■■■□□ 2.28
ACAP3-201ENST00000353662 PTPN23Q9H3S7 1636 aa29.3■■■□□ 2.28
ACAP3-201ENST00000353662 CHD1O14646 1710 aa29.27■■■□□ 2.28
ACAP3-201ENST00000353662 ZNF316A6NFI3 1004 aaPredicted RBP29.22■■■□□ 2.27
ACAP3-201ENST00000353662 CDK11AQ9UQ88 783 aaPredicted RBP29.22■■■□□ 2.27
ACAP3-201ENST00000353662 PRG4Q92954 1404 aaPredicted RBP29.21■■■□□ 2.27
ACAP3-201ENST00000353662 SCAF1Q9H7N4 1312 aaKnown RBP29.2■■■□□ 2.27
ACAP3-201ENST00000353662 MAPKBP1O60336 1514 aa29.2■■■□□ 2.27
ACAP3-201ENST00000353662 TCOF1Q13428 1488 aaKnown RBP29.19■■■□□ 2.26
ACAP3-201ENST00000353662 DIEXFQ68CQ4 756 aaKnown RBP29.15■■■□□ 2.26
ACAP3-201ENST00000353662 MIA2Q96PC5 1412 aa29.14■■■□□ 2.26
ACAP3-201ENST00000353662 CHIC2Q9UKJ5 165 aa29.14■■■□□ 2.26
ACAP3-201ENST00000353662 HFM1A2PYH4 1435 aa29.14■■■□□ 2.26
ACAP3-201ENST00000353662 TROQ12816 1431 aaPredicted RBP29.12■■■□□ 2.25
ACAP3-201ENST00000353662 ABCA8O94911 1581 aa29.12■■■□□ 2.25
ACAP3-201ENST00000353662 NAIPQ13075 1403 aa29.09■■■□□ 2.25
ACAP3-201ENST00000353662 RRP7BPQ9NSQ0 103 aa29.09■■■□□ 2.25
ACAP3-201ENST00000353662 PTPRGP23470 1445 aa29.08■■■□□ 2.25
ACAP3-201ENST00000353662 ZNF644Q9H582 1327 aaPredicted RBP29.05■■■□□ 2.24
ACAP3-201ENST00000353662 SIN3AQ96ST3 1273 aa29.04■■■□□ 2.24
ACAP3-201ENST00000353662 ATP10BO94823 1461 aa29.03■■■□□ 2.24
ACAP3-201ENST00000353662 KIF14Q15058 1648 aa29.03■■■□□ 2.24
ACAP3-201ENST00000353662 NEUROD1Q13562 356 aa29.01■■■□□ 2.24
ACAP3-201ENST00000353662 PLEKHD1A6NEE1 506 aa29■■■□□ 2.23
ACAP3-201ENST00000353662 SHROOM2Q13796 1616 aa28.99■■■□□ 2.23
ACAP3-201ENST00000353662 ERCC6L2Q5T890 1561 aa28.96■■■□□ 2.23
ACAP3-201ENST00000353662 CFDP1Q9UEE9 299 aaPredicted RBP28.96■■■□□ 2.23
ACAP3-201ENST00000353662 ADCY10Q96PN6 1610 aa28.96■■■□□ 2.23
ACAP3-201ENST00000353662 UACAQ9BZF9 1416 aa28.95■■■□□ 2.23
ACAP3-201ENST00000353662 DAPK1P53355 1430 aa28.95■■■□□ 2.22
ACAP3-201ENST00000353662 GPATCH8Q9UKJ3 1502 aaKnown RBP28.94■■■□□ 2.22
ACAP3-201ENST00000353662 ZNF777Q9ULD5 760 aaPredicted RBP28.93■■■□□ 2.22
ACAP3-201ENST00000353662 PELP1Q8IZL8 1130 aaKnown RBP28.92■■■□□ 2.22
ACAP3-201ENST00000353662 ABCC5O15440 1437 aa28.92■■■□□ 2.22
ACAP3-201ENST00000353662 GCC2Q8IWJ2 1684 aa28.91■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms