RNA–Protein interactions for RNA: ENST00000353284.7

PTPRS-202, Transcript of protein tyrosine phosphatase, receptor type S, humanhuman

TSL 5 BASIC

Gene PTPRS, Length 4,518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRS-202ENST00000353284 RRP7BPQ9NSQ0 103 aa16.26■□□□□ 0.19
PTPRS-202ENST00000353284 CCDC88BA6NC98 1476 aa16.23■□□□□ 0.19
PTPRS-202ENST00000353284 PRKCSHP14314 528 aaPredicted RBP16.22■□□□□ 0.19
PTPRS-202ENST00000353284 MROH2BQ7Z745 1585 aa16.21■□□□□ 0.19
PTPRS-202ENST00000353284 ABCC8Q09428 1581 aa16.21■□□□□ 0.18
PTPRS-202ENST00000353284 TSHZ2Q9NRE2 1034 aa16.2■□□□□ 0.18
PTPRS-202ENST00000353284 RBM19Q9Y4C8 960 aaKnown RBP16.2■□□□□ 0.18
PTPRS-202ENST00000353284 CCNB3Q8WWL7 1395 aa16.19■□□□□ 0.18
PTPRS-202ENST00000353284 VPS8Q8N3P4 1428 aa16.18■□□□□ 0.18
PTPRS-202ENST00000353284 KANK4Q5T7N3 995 aaPredicted RBP16.17■□□□□ 0.18
PTPRS-202ENST00000353284 BAZ1AQ9NRL2 1556 aaPredicted RBP16.17■□□□□ 0.18
PTPRS-202ENST00000353284 KDM2AQ9Y2K7 1162 aa16.16■□□□□ 0.18
PTPRS-202ENST00000353284 PPP4R2Q9NY27 417 aa16.13■□□□□ 0.17
PTPRS-202ENST00000353284 B4GALNT3Q6L9W6 998 aa16.13■□□□□ 0.17
PTPRS-202ENST00000353284 KIF27Q86VH2 1401 aa16.12■□□□□ 0.17
PTPRS-202ENST00000353284 BAZ1BQ9UIG0 1483 aaKnown RBP16.11■□□□□ 0.17
PTPRS-202ENST00000353284 CCER2I3L3R5 266 aa16.07■□□□□ 0.16
PTPRS-202ENST00000353284 KCNH8Q96L42 1107 aa16.07■□□□□ 0.16
PTPRS-202ENST00000353284 ARXQ96QS3 562 aa16.04■□□□□ 0.16
PTPRS-202ENST00000353284 CHMP7Q8WUX9 453 aaPredicted RBP16.04■□□□□ 0.16
PTPRS-202ENST00000353284 RTN4Q9NQC3 1192 aaKnown RBP16.03■□□□□ 0.16
PTPRS-202ENST00000353284 NOP58Q9Y2X3 529 aaKnown RBP16.03■□□□□ 0.16
PTPRS-202ENST00000353284 TIMELESSQ9UNS1 1208 aa16.03■□□□□ 0.16
PTPRS-202ENST00000353284 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.02■□□□□ 0.161e-6■□□□□ 9.8
PTPRS-202ENST00000353284 NPM1P06748 294 aaKnown RBP eCLIP16.02■□□□□ 0.15
PTPRS-202ENST00000353284 UPF2Q9HAU5 1272 aaKnown RBP16.02■□□□□ 0.15
PTPRS-202ENST00000353284 RAB3GAP2Q9H2M9 1393 aa16.01■□□□□ 0.15
PTPRS-202ENST00000353284 SETD5Q9C0A6 1442 aa16.01■□□□□ 0.15
PTPRS-202ENST00000353284 WDR43Q15061 677 aaKnown RBP eCLIP16■□□□□ 0.15
PTPRS-202ENST00000353284 GOLGA6L2Q8N9W4 650 aaPredicted RBP16■□□□□ 0.15
PTPRS-202ENST00000353284 WIZO95785 1651 aa15.99■□□□□ 0.15
PTPRS-202ENST00000353284 TSPY4P0CV99 314 aa15.99■□□□□ 0.15
PTPRS-202ENST00000353284 TSPY10P0CW01 314 aa15.99■□□□□ 0.15
PTPRS-202ENST00000353284 LAS1LQ9Y4W2 734 aaKnown RBP15.98■□□□□ 0.15
PTPRS-202ENST00000353284 RUSC2Q8N2Y8 1516 aa15.97■□□□□ 0.15
PTPRS-202ENST00000353284 DHX57Q6P158 1386 aaKnown RBP15.96■□□□□ 0.15
PTPRS-202ENST00000353284 DEKP35659 375 aaKnown RBP15.96■□□□□ 0.14
PTPRS-202ENST00000353284 HSP90AA1P07900 732 aaKnown RBP15.95■□□□□ 0.14
PTPRS-202ENST00000353284 PPP1R15AO75807 674 aaPredicted RBP15.94■□□□□ 0.14
PTPRS-202ENST00000353284 HSPA5P11021 654 aaKnown RBP15.94■□□□□ 0.14
PTPRS-202ENST00000353284 ERCC6Q03468 1493 aa15.94■□□□□ 0.14
PTPRS-202ENST00000353284 NEFMP07197 916 aa15.93■□□□□ 0.14
PTPRS-202ENST00000353284 RGL3Q3MIN7 710 aa15.92■□□□□ 0.14
PTPRS-202ENST00000353284 DDRGK1Q96HY6 314 aa15.92■□□□□ 0.14
PTPRS-202ENST00000353284 CARD11Q9BXL7 1154 aa15.91■□□□□ 0.14
PTPRS-202ENST00000353284 CHGAP10645 457 aaKnown RBP15.91■□□□□ 0.14
PTPRS-202ENST00000353284 CDK11BP21127 795 aaKnown RBP15.9■□□□□ 0.14
PTPRS-202ENST00000353284 TNNT2P45379 298 aaPredicted RBP15.9■□□□□ 0.14
PTPRS-202ENST00000353284 FHAD1B1AJZ9 1412 aa15.9■□□□□ 0.14
PTPRS-202ENST00000353284 CARMIL1Q5VZK9 1371 aa15.9■□□□□ 0.14
PTPRS-202ENST00000353284 AMER1Q5JTC6 1135 aaPredicted RBP15.9■□□□□ 0.14
PTPRS-202ENST00000353284 PODXL2Q9NZ53 605 aa15.89■□□□□ 0.13
PTPRS-202ENST00000353284 PPM1GO15355 546 aaPredicted RBP15.88■□□□□ 0.13
PTPRS-202ENST00000353284 RAPGEF2Q9Y4G8 1499 aa15.88■□□□□ 0.13
PTPRS-202ENST00000353284 CUX2O14529 1486 aa15.86■□□□□ 0.13
PTPRS-202ENST00000353284 ANP32BQ92688 251 aaKnown RBP15.86■□□□□ 0.13
PTPRS-202ENST00000353284 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.86■□□□□ 0.13
PTPRS-202ENST00000353284 FOXD1Q16676 465 aa15.85■□□□□ 0.13
PTPRS-202ENST00000353284 CFDP1Q9UEE9 299 aaPredicted RBP15.85■□□□□ 0.13
PTPRS-202ENST00000353284 RGS3P49796 1198 aa15.83■□□□□ 0.12
PTPRS-202ENST00000353284 ERICH6BQ5W0A0 696 aa15.83■□□□□ 0.12
PTPRS-202ENST00000353284 TOP2AP11388 1531 aaKnown RBP15.82■□□□□ 0.12
PTPRS-202ENST00000353284 ARHGAP35Q9NRY4 1499 aa15.8■□□□□ 0.12
PTPRS-202ENST00000353284 BECN1Q14457 450 aa15.79■□□□□ 0.12
PTPRS-202ENST00000353284 ESF1Q9H501 851 aaKnown RBP15.78■□□□□ 0.12
PTPRS-202ENST00000353284 CC2D1BQ5T0F9 858 aaKnown RBP15.77■□□□□ 0.11
PTPRS-202ENST00000353284 KNSTRNQ9Y448 316 aa15.76■□□□□ 0.11
PTPRS-202ENST00000353284 PLEKHD1A6NEE1 506 aa15.76■□□□□ 0.11
PTPRS-202ENST00000353284 A0A0U1RQG5 324 aaPredicted RBP15.74■□□□□ 0.11
PTPRS-202ENST00000353284 L3MBTL2Q969R5 705 aa15.73■□□□□ 0.11
PTPRS-202ENST00000353284 DCAF11Q8TEB1 546 aa15.72■□□□□ 0.11
PTPRS-202ENST00000353284 MPHOSPH9Q99550 1183 aa15.72■□□□□ 0.11
PTPRS-202ENST00000353284 NEUROD2Q15784 382 aa15.72■□□□□ 0.11
PTPRS-202ENST00000353284 SMARCA2P51531 1590 aa15.71■□□□□ 0.11
PTPRS-202ENST00000353284 IPO9Q96P70 1041 aaKnown RBP15.68■□□□□ 0.1
PTPRS-202ENST00000353284 NUDCQ9Y266 331 aa15.68■□□□□ 0.1
PTPRS-202ENST00000353284 RCAN3Q9UKA8 241 aa15.67■□□□□ 0.1
PTPRS-202ENST00000353284 NAP1L5Q96NT1 182 aaPredicted RBP15.67■□□□□ 0.1
PTPRS-202ENST00000353284 FRAT1Q92837 279 aaPredicted RBP15.67■□□□□ 0.1
PTPRS-202ENST00000353284 PDS5BQ9NTI5 1447 aa15.67■□□□□ 0.1
PTPRS-202ENST00000353284 PKD2Q13563 968 aa15.66■□□□□ 0.1
PTPRS-202ENST00000353284 PLPPR3Q6T4P5 718 aa15.66■□□□□ 0.1
PTPRS-202ENST00000353284 SENP3Q9H4L4 574 aaPredicted RBP15.65■□□□□ 0.1
PTPRS-202ENST00000353284 VSIG10Q8N0Z9 540 aa15.65■□□□□ 0.1
PTPRS-202ENST00000353284 TRIM44Q96DX7 344 aaPredicted RBP15.64■□□□□ 0.09
PTPRS-202ENST00000353284 FMN1Q68DA7 1419 aa15.64■□□□□ 0.09
PTPRS-202ENST00000353284 FHOD3Q2V2M9 1422 aa15.64■□□□□ 0.09
PTPRS-202ENST00000353284 NCLP19338 710 aaKnown RBP15.64■□□□□ 0.09
PTPRS-202ENST00000353284 CDCA8Q53HL2 280 aa15.64■□□□□ 0.09
PTPRS-202ENST00000353284 PKNOX2Q96KN3 472 aa15.64■□□□□ 0.09
PTPRS-202ENST00000353284 TCERG1O14776 1098 aaKnown RBP15.63■□□□□ 0.09
PTPRS-202ENST00000353284 PRKRIP1Q9H875 184 aaPredicted RBP15.63■□□□□ 0.09
PTPRS-202ENST00000353284 FANCIQ9NVI1 1328 aa15.62■□□□□ 0.09
PTPRS-202ENST00000353284 STAG3Q9UJ98 1225 aa15.6■□□□□ 0.09
PTPRS-202ENST00000353284 FTSJ3Q8IY81 847 aaKnown RBP15.59■□□□□ 0.09
PTPRS-202ENST00000353284 EIF4G1Q04637 1599 aaKnown RBP15.58■□□□□ 0.09
PTPRS-202ENST00000353284 TMF1P82094 1093 aa15.58■□□□□ 0.08
PTPRS-202ENST00000353284 SMARCA4P51532 1647 aa15.58■□□□□ 0.08
PTPRS-202ENST00000353284 MYH16Q9H6N6 1097 aa15.57■□□□□ 0.08
PTPRS-202ENST00000353284 CFAP53Q96M91 514 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms