RNA–Protein interactions for RNA: ENST00000352957.8

MRPL39-202, Transcript of mitochondrial ribosomal protein L39, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MRPL39, Length 1,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL39-202ENST00000352957 JPH4Q96JJ6 628 aa35.32■■■■□ 3.24
MRPL39-202ENST00000352957 KIAA0586Q9BVV6 1533 aa35.32■■■■□ 3.24
MRPL39-202ENST00000352957 PRG4Q92954 1404 aaPredicted RBP35.31■■■■□ 3.24
MRPL39-202ENST00000352957 RAPGEF2Q9Y4G8 1499 aa35.24■■■■□ 3.23
MRPL39-202ENST00000352957 IQGAP2Q13576 1575 aa35.13■■■■□ 3.21
MRPL39-202ENST00000352957 PRXQ9BXM0 1461 aa35.07■■■■□ 3.2
MRPL39-202ENST00000352957 CTTNBP2Q8WZ74 1663 aa35.02■■■■□ 3.2
MRPL39-202ENST00000352957 CHIC1Q5VXU3 224 aa34.99■■■■□ 3.19
MRPL39-202ENST00000352957 TRHP20396 242 aaPredicted RBP34.96■■■■□ 3.19
MRPL39-202ENST00000352957 EEA1Q15075 1411 aa34.96■■■■□ 3.19
MRPL39-202ENST00000352957 CSRNP3Q8WYN3 585 aa34.95■■■■□ 3.19
MRPL39-202ENST00000352957 CARMIL2Q6F5E8 1435 aa34.93■■■■□ 3.18
MRPL39-202ENST00000352957 UGGT2Q9NYU1 1516 aa34.91■■■■□ 3.18
MRPL39-202ENST00000352957 DISP1Q96F81 1524 aa34.89■■■■□ 3.18
MRPL39-202ENST00000352957 ADCY10Q96PN6 1610 aa34.86■■■■□ 3.17
MRPL39-202ENST00000352957 TNIKQ9UKE5 1360 aa34.84■■■■□ 3.17
MRPL39-202ENST00000352957 PTPRGP23470 1445 aa34.83■■■■□ 3.17
MRPL39-202ENST00000352957 FAM9AQ8IZU1 332 aaPredicted RBP34.83■■■■□ 3.17
MRPL39-202ENST00000352957 KIAA0556O60303 1618 aa34.81■■■■□ 3.16
MRPL39-202ENST00000352957 TTBK1Q5TCY1 1321 aaPredicted RBP34.81■■■■□ 3.16
MRPL39-202ENST00000352957 KIF21BO75037 1637 aa34.68■■■■□ 3.14
MRPL39-202ENST00000352957 NPM1P06748 294 aaKnown RBP eCLIP34.68■■■■□ 3.14
MRPL39-202ENST00000352957 GOLGA3Q08378 1498 aa34.67■■■■□ 3.14
MRPL39-202ENST00000352957 MAPKBP1O60336 1514 aa34.63■■■■□ 3.13
MRPL39-202ENST00000352957 KIF13AQ9H1H9 1805 aa34.62■■■■□ 3.13
MRPL39-202ENST00000352957 UACAQ9BZF9 1416 aa34.61■■■■□ 3.13
MRPL39-202ENST00000352957 UHRF1BP1LA0JNW5 1464 aa34.59■■■■□ 3.13
MRPL39-202ENST00000352957 ABCC2Q92887 1545 aa34.58■■■■□ 3.13
MRPL39-202ENST00000352957 SAMD9Q5K651 1589 aa34.51■■■■□ 3.12
MRPL39-202ENST00000352957 ABCC10Q5T3U5 1492 aa34.49■■■■□ 3.11
MRPL39-202ENST00000352957 DIP2BQ9P265 1576 aa34.48■■■■□ 3.11
MRPL39-202ENST00000352957 PLB1Q6P1J6 1458 aa34.46■■■■□ 3.11
MRPL39-202ENST00000352957 P3H3Q8IVL6 736 aa34.45■■■■□ 3.11
MRPL39-202ENST00000352957 KDM5BQ9UGL1 1544 aa34.44■■■■□ 3.1
MRPL39-202ENST00000352957 ABCA8O94911 1581 aa34.44■■■■□ 3.1
MRPL39-202ENST00000352957 ZCCHC11Q5TAX3 1644 aaKnown RBP34.44■■■■□ 3.1
MRPL39-202ENST00000352957 EHMT2Q96KQ7 1210 aa34.43■■■■□ 3.1
MRPL39-202ENST00000352957 RANGAP1P46060 587 aaPredicted RBP34.4■■■■□ 3.1
MRPL39-202ENST00000352957 FAM69CQ0P6D2 419 aa34.4■■■■□ 3.1
MRPL39-202ENST00000352957 ASXL2Q76L83 1435 aa34.38■■■■□ 3.09
MRPL39-202ENST00000352957 UBTFP17480 764 aaKnown RBP34.33■■■■□ 3.09
MRPL39-202ENST00000352957 EFCAB5A4FU69 1503 aa34.28■■■■□ 3.08
MRPL39-202ENST00000352957 FHOD3Q2V2M9 1422 aa34.27■■■■□ 3.08
MRPL39-202ENST00000352957 TSPOAP1O95153 1857 aa34.26■■■■□ 3.07
MRPL39-202ENST00000352957 RAPGEF6Q8TEU7 1601 aa34.23■■■■□ 3.07
MRPL39-202ENST00000352957 GLI2P10070 1586 aa34.21■■■■□ 3.07
MRPL39-202ENST00000352957 EPRSP07814 1512 aaKnown RBP34.19■■■■□ 3.06
MRPL39-202ENST00000352957 WDR7Q9Y4E6 1490 aa34.18■■■■□ 3.06
MRPL39-202ENST00000352957 ARID3CA6NKF2 412 aa34.13■■■■□ 3.05
MRPL39-202ENST00000352957 ATP10BO94823 1461 aa34.13■■■■□ 3.05
MRPL39-202ENST00000352957 PPRC1Q5VV67 1664 aaKnown RBP34.1■■■■□ 3.05
MRPL39-202ENST00000352957 MAP3K4Q9Y6R4 1608 aa34.1■■■■□ 3.05
MRPL39-202ENST00000352957 ARHGAP35Q9NRY4 1499 aa34.09■■■■□ 3.05
MRPL39-202ENST00000352957 NUP153P49790 1475 aaKnown RBP34.07■■■■□ 3.05
MRPL39-202ENST00000352957 KCNH8Q96L42 1107 aa33.99■■■■□ 3.03
MRPL39-202ENST00000352957 KDM6BO15054 1643 aa33.98■■■■□ 3.03
MRPL39-202ENST00000352957 CFAP43Q8NDM7 1665 aa33.96■■■■□ 3.03
MRPL39-202ENST00000352957 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.94■■■■□ 3.02
MRPL39-202ENST00000352957 HNRNPUL2Q1KMD3 747 aaKnown RBP33.94■■■■□ 3.02
MRPL39-202ENST00000352957 FMN1Q68DA7 1419 aa33.94■■■■□ 3.02
MRPL39-202ENST00000352957 TEX14Q8IWB6 1497 aa33.88■■■■□ 3.01
MRPL39-202ENST00000352957 CD109Q6YHK3 1445 aa33.87■■■■□ 3.01
MRPL39-202ENST00000352957 HECW1Q76N89 1606 aa33.86■■■■□ 3.01
MRPL39-202ENST00000352957 CDK13Q14004 1512 aaKnown RBP33.84■■■■□ 3.01
MRPL39-202ENST00000352957 ABCA9Q8IUA7 1624 aa33.83■■■■□ 3.01
MRPL39-202ENST00000352957 MAGI3Q5TCQ9 1506 aa33.82■■■■□ 3
MRPL39-202ENST00000352957 CLIP1P30622 1438 aa33.79■■■■□ 3
MRPL39-202ENST00000352957 ATP1B4Q9UN42 357 aaPredicted RBP33.79■■■■□ 3
MRPL39-202ENST00000352957 LRRIQ1Q96JM4 1722 aa33.76■■■■□ 3
MRPL39-202ENST00000352957 PLEKHD1A6NEE1 506 aa33.76■■■□□ 2.99
MRPL39-202ENST00000352957 COL17A1Q9UMD9 1497 aaPredicted RBP33.74■■■□□ 2.99
MRPL39-202ENST00000352957 PCF11O94913 1555 aaKnown RBP33.73■■■□□ 2.99
MRPL39-202ENST00000352957 AEBP2Q6ZN18 517 aaPredicted RBP33.71■■■□□ 2.99
MRPL39-202ENST00000352957 CASKIN1Q8WXD9 1431 aa33.66■■■□□ 2.98
MRPL39-202ENST00000352957 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.64■■■□□ 2.98
MRPL39-202ENST00000352957 TTC37Q6PGP7 1564 aa33.62■■■□□ 2.97
MRPL39-202ENST00000352957 CEP162Q5TB80 1403 aa33.6■■■□□ 2.97
MRPL39-202ENST00000352957 FYCO1Q9BQS8 1478 aa33.59■■■□□ 2.97
MRPL39-202ENST00000352957 LOC105371045A0A1W2PR82 267 aa33.58■■■□□ 2.97
MRPL39-202ENST00000352957 CDK11AQ9UQ88 783 aaPredicted RBP33.56■■■□□ 2.96
MRPL39-202ENST00000352957 CCDC18Q5T9S5 1454 aa33.56■■■□□ 2.96
MRPL39-202ENST00000352957 ARAP3Q8WWN8 1544 aa33.53■■■□□ 2.96
MRPL39-202ENST00000352957 NEO1Q92859 1461 aa33.53■■■□□ 2.96
MRPL39-202ENST00000352957 KIF14Q15058 1648 aa33.52■■■□□ 2.96
MRPL39-202ENST00000352957 TROQ12816 1431 aaPredicted RBP33.51■■■□□ 2.95
MRPL39-202ENST00000352957 PHLDB1Q86UU1 1377 aa33.49■■■□□ 2.95
MRPL39-202ENST00000352957 CFAP74Q9C0B2 1584 aa33.46■■■□□ 2.95
MRPL39-202ENST00000352957 MYO5CQ9NQX4 1742 aa33.45■■■□□ 2.95
MRPL39-202ENST00000352957 FANCAO15360 1455 aa33.44■■■□□ 2.94
MRPL39-202ENST00000352957 PLCH2O75038 1416 aa33.39■■■□□ 2.94
MRPL39-202ENST00000352957 AKNAQ7Z591 1439 aa33.38■■■□□ 2.93
MRPL39-202ENST00000352957 FRMPD1Q5SYB0 1578 aa33.37■■■□□ 2.93
MRPL39-202ENST00000352957 RAPGEF3O95398 923 aa33.35■■■□□ 2.93
MRPL39-202ENST00000352957 RICTORQ6R327 1708 aa33.32■■■□□ 2.92
MRPL39-202ENST00000352957 DENND4BO75064 1496 aaPredicted RBP33.3■■■□□ 2.92
MRPL39-202ENST00000352957 CDC42BPBQ9Y5S2 1711 aa33.28■■■□□ 2.92
MRPL39-202ENST00000352957 KDM4FA0A1W2PPD8 638 aa33.26■■■□□ 2.91
MRPL39-202ENST00000352957 ARHGAP5Q13017 1502 aa33.26■■■□□ 2.91
MRPL39-202ENST00000352957 ADGRL1O94910 1474 aa33.25■■■□□ 2.91
MRPL39-202ENST00000352957 PREX2Q70Z35 1606 aa33.25■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms