RNA–Protein interactions for RNA: ENST00000351097.9

USP25-203, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best) BASIC

Gene USP25, Length 2,158 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-203ENST00000351097 CTTNBP2Q8WZ74 1663 aa35.86■■■■□ 3.33
USP25-203ENST00000351097 PBRM1Q86U86 1689 aa35.84■■■■□ 3.33
USP25-203ENST00000351097 THOC2Q8NI27 1593 aaKnown RBP35.82■■■■□ 3.33
USP25-203ENST00000351097 ZNF608Q9ULD9 1512 aaPredicted RBP35.78■■■■□ 3.32
USP25-203ENST00000351097 GRIN2BQ13224 1484 aa35.75■■■■□ 3.31
USP25-203ENST00000351097 EFCAB5A4FU69 1503 aa35.74■■■■□ 3.31
USP25-203ENST00000351097 FHAD1B1AJZ9 1412 aa35.73■■■■□ 3.31
USP25-203ENST00000351097 KANK4Q5T7N3 995 aaPredicted RBP35.72■■■■□ 3.31
USP25-203ENST00000351097 ADAMTS12P58397 1594 aa35.7■■■■□ 3.31
USP25-203ENST00000351097 P3H3Q8IVL6 736 aa35.68■■■■□ 3.3
USP25-203ENST00000351097 FHOD3Q2V2M9 1422 aa35.66■■■■□ 3.3
USP25-203ENST00000351097 EIF4G3O43432 1585 aaKnown RBP35.6■■■■□ 3.29
USP25-203ENST00000351097 MAP3K1Q13233 1512 aa35.59■■■■□ 3.29
USP25-203ENST00000351097 PCF11O94913 1555 aaKnown RBP35.56■■■■□ 3.28
USP25-203ENST00000351097 SAMD9Q5K651 1589 aa35.56■■■■□ 3.28
USP25-203ENST00000351097 TIAM1Q13009 1591 aa35.56■■■■□ 3.28
USP25-203ENST00000351097 SNAPC4Q5SXM2 1469 aa35.5■■■■□ 3.27
USP25-203ENST00000351097 CASKIN1Q8WXD9 1431 aa35.47■■■■□ 3.27
USP25-203ENST00000351097 FYCO1Q9BQS8 1478 aa35.47■■■■□ 3.27
USP25-203ENST00000351097 FMN1Q68DA7 1419 aa35.46■■■■□ 3.27
USP25-203ENST00000351097 HNRNPUL2Q1KMD3 747 aaKnown RBP35.44■■■■□ 3.26
USP25-203ENST00000351097 IQGAP2Q13576 1575 aa35.42■■■■□ 3.26
USP25-203ENST00000351097 LRRC9Q6ZRR7 1453 aa35.41■■■■□ 3.26
USP25-203ENST00000351097 CFAP43Q8NDM7 1665 aa35.41■■■■□ 3.26
USP25-203ENST00000351097 RRBP1Q9P2E9 1410 aaKnown RBP35.38■■■■□ 3.25
USP25-203ENST00000351097 MAGI1Q96QZ7 1491 aaPredicted RBP35.36■■■■□ 3.25
USP25-203ENST00000351097 ATP1B4Q9UN42 357 aaPredicted RBP35.36■■■■□ 3.25
USP25-203ENST00000351097 GRIN2AQ12879 1464 aa35.34■■■■□ 3.25
USP25-203ENST00000351097 DIEXFQ68CQ4 756 aaKnown RBP35.3■■■■□ 3.24
USP25-203ENST00000351097 KIAA0586Q9BVV6 1533 aa35.27■■■■□ 3.24
USP25-203ENST00000351097 SYNJ2O15056 1496 aa35.26■■■■□ 3.24
USP25-203ENST00000351097 UGGT2Q9NYU1 1516 aa35.25■■■■□ 3.23
USP25-203ENST00000351097 CCNB3Q8WWL7 1395 aa35.25■■■■□ 3.23
USP25-203ENST00000351097 CHMP7Q8WUX9 453 aaPredicted RBP35.2■■■■□ 3.22
USP25-203ENST00000351097 SCAF1Q9H7N4 1312 aaKnown RBP35.18■■■■□ 3.22
USP25-203ENST00000351097 PHLDB1Q86UU1 1377 aa35.17■■■■□ 3.22
USP25-203ENST00000351097 LRRIQ1Q96JM4 1722 aa35.14■■■■□ 3.22
USP25-203ENST00000351097 CEP170Q5SW79 1584 aa35.12■■■■□ 3.21
USP25-203ENST00000351097 ZNF316A6NFI3 1004 aaPredicted RBP35.12■■■■□ 3.21
USP25-203ENST00000351097 DISP1Q96F81 1524 aa35.1■■■■□ 3.21
USP25-203ENST00000351097 FBLN2P98095 1184 aa35.08■■■■□ 3.21
USP25-203ENST00000351097 KIAA0556O60303 1618 aa35.07■■■■□ 3.2
USP25-203ENST00000351097 NUP160Q12769 1436 aa35.05■■■■□ 3.2
USP25-203ENST00000351097 MTUS2Q5JR59 1369 aa35.02■■■■□ 3.2
USP25-203ENST00000351097 HECW1Q76N89 1606 aa35.01■■■■□ 3.2
USP25-203ENST00000351097 CCDC18Q5T9S5 1454 aa34.99■■■■□ 3.19
USP25-203ENST00000351097 ACIN1Q9UKV3 1341 aaKnown RBP34.97■■■■□ 3.19
USP25-203ENST00000351097 ITGAEP38570 1179 aa34.93■■■■□ 3.18
USP25-203ENST00000351097 EPRSP07814 1512 aaKnown RBP34.93■■■■□ 3.18
USP25-203ENST00000351097 EHBP1L1Q8N3D4 1523 aa34.92■■■■□ 3.18
USP25-203ENST00000351097 MAGI3Q5TCQ9 1506 aa34.9■■■■□ 3.18
USP25-203ENST00000351097 FAM50AQ14320 339 aaKnown RBP34.87■■■■□ 3.17
USP25-203ENST00000351097 NCOA2Q15596 1464 aa34.87■■■■□ 3.17
USP25-203ENST00000351097 CENPBP07199 599 aaPredicted RBP34.86■■■■□ 3.17
USP25-203ENST00000351097 NEUROD1Q13562 356 aa34.86■■■■□ 3.17
USP25-203ENST00000351097 JPH4Q96JJ6 628 aa34.86■■■■□ 3.17
USP25-203ENST00000351097 CLSPNQ9HAW4 1339 aa34.84■■■■□ 3.17
USP25-203ENST00000351097 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.84■■■■□ 3.17
USP25-203ENST00000351097 FGD6Q6ZV73 1430 aa34.84■■■■□ 3.17
USP25-203ENST00000351097 CDK13Q14004 1512 aaKnown RBP34.84■■■■□ 3.17
USP25-203ENST00000351097 SUPT6HQ7KZ85 1726 aaKnown RBP34.84■■■■□ 3.17
USP25-203ENST00000351097 ARHGEF11O15085 1522 aa34.79■■■■□ 3.16
USP25-203ENST00000351097 CARMIL2Q6F5E8 1435 aa34.78■■■■□ 3.16
USP25-203ENST00000351097 RAPGEF6Q8TEU7 1601 aa34.78■■■■□ 3.16
USP25-203ENST00000351097 DHX57Q6P158 1386 aaKnown RBP34.78■■■■□ 3.16
USP25-203ENST00000351097 NUP153P49790 1475 aaKnown RBP34.77■■■■□ 3.16
USP25-203ENST00000351097 MYOM3Q5VTT5 1437 aa34.76■■■■□ 3.15
USP25-203ENST00000351097 ARID3CA6NKF2 412 aa34.74■■■■□ 3.15
USP25-203ENST00000351097 CHD1O14646 1710 aa34.7■■■■□ 3.15
USP25-203ENST00000351097 RAB3GAP2Q9H2M9 1393 aa34.69■■■■□ 3.14
USP25-203ENST00000351097 PLB1Q6P1J6 1458 aa34.67■■■■□ 3.14
USP25-203ENST00000351097 SETD5Q9C0A6 1442 aa34.66■■■■□ 3.14
USP25-203ENST00000351097 PTPN23Q9H3S7 1636 aa34.57■■■■□ 3.13
USP25-203ENST00000351097 PRG4Q92954 1404 aaPredicted RBP34.57■■■■□ 3.12
USP25-203ENST00000351097 PTPRKQ15262 1439 aa34.53■■■■□ 3.12
USP25-203ENST00000351097 CDK11AQ9UQ88 783 aaPredicted RBP34.53■■■■□ 3.12
USP25-203ENST00000351097 TCOF1Q13428 1488 aaKnown RBP34.52■■■■□ 3.12
USP25-203ENST00000351097 PELP1Q8IZL8 1130 aaKnown RBP34.52■■■■□ 3.12
USP25-203ENST00000351097 ABCA8O94911 1581 aa34.52■■■■□ 3.12
USP25-203ENST00000351097 MIER1Q8N108 512 aa34.51■■■■□ 3.12
USP25-203ENST00000351097 GTF3C3Q9Y5Q9 886 aa34.49■■■■□ 3.11
USP25-203ENST00000351097 MIA2Q96PC5 1412 aa34.49■■■■□ 3.11
USP25-203ENST00000351097 SHROOM2Q13796 1616 aa34.46■■■■□ 3.11
USP25-203ENST00000351097 TROQ12816 1431 aaPredicted RBP34.45■■■■□ 3.11
USP25-203ENST00000351097 PTPRGP23470 1445 aa34.41■■■■□ 3.1
USP25-203ENST00000351097 HFM1A2PYH4 1435 aa34.4■■■■□ 3.1
USP25-203ENST00000351097 MAPKBP1O60336 1514 aa34.38■■■■□ 3.09
USP25-203ENST00000351097 ATP10BO94823 1461 aa34.35■■■■□ 3.09
USP25-203ENST00000351097 YTHDC1Q96MU7 727 aaKnown RBP34.33■■■■□ 3.09
USP25-203ENST00000351097 ADCY10Q96PN6 1610 aa34.32■■■■□ 3.08
USP25-203ENST00000351097 NAIPQ13075 1403 aa34.32■■■■□ 3.08
USP25-203ENST00000351097 CLASP1Q7Z460 1538 aa34.3■■■■□ 3.08
USP25-203ENST00000351097 KIF14Q15058 1648 aa34.29■■■■□ 3.08
USP25-203ENST00000351097 ERCC6L2Q5T890 1561 aa34.28■■■■□ 3.08
USP25-203ENST00000351097 PLEKHD1A6NEE1 506 aa34.25■■■■□ 3.07
USP25-203ENST00000351097 GPATCH8Q9UKJ3 1502 aaKnown RBP34.22■■■■□ 3.07
USP25-203ENST00000351097 UACAQ9BZF9 1416 aa34.22■■■■□ 3.07
USP25-203ENST00000351097 CHIC2Q9UKJ5 165 aa34.21■■■■□ 3.07
USP25-203ENST00000351097 ZNF644Q9H582 1327 aaPredicted RBP34.21■■■■□ 3.07
USP25-203ENST00000351097 AKNAQ7Z591 1439 aa34.2■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms