RNA–Protein interactions for RNA: ENST00000350435.11

UBE2D3-205, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-205ENST00000350435 NPM1P06748 294 aaKnown RBP eCLIP17.66■□□□□ 0.42
UBE2D3-205ENST00000350435 MAPKBP1O60336 1514 aa17.65■□□□□ 0.42
UBE2D3-205ENST00000350435 SHROOM2Q13796 1616 aa17.6■□□□□ 0.41
UBE2D3-205ENST00000350435 CCDC88BA6NC98 1476 aa17.59■□□□□ 0.41
UBE2D3-205ENST00000350435 FGD5Q6ZNL6 1462 aa17.57■□□□□ 0.4
UBE2D3-205ENST00000350435 GRIN2AQ12879 1464 aa17.53■□□□□ 0.4
UBE2D3-205ENST00000350435 TOP2BQ02880 1626 aa17.5■□□□□ 0.39
UBE2D3-205ENST00000350435 NUP160Q12769 1436 aa17.49■□□□□ 0.39
UBE2D3-205ENST00000350435 PRG4Q92954 1404 aaPredicted RBP17.46■□□□□ 0.39
UBE2D3-205ENST00000350435 ADCY10Q96PN6 1610 aa17.45■□□□□ 0.38
UBE2D3-205ENST00000350435 SPATA31D1Q6ZQQ2 1576 aa17.42■□□□□ 0.38
UBE2D3-205ENST00000350435 PPRC1Q5VV67 1664 aaKnown RBP17.41■□□□□ 0.38
UBE2D3-205ENST00000350435 ABCA5Q8WWZ7 1642 aa17.4■□□□□ 0.38
UBE2D3-205ENST00000350435 ADAMTS12P58397 1594 aa17.37■□□□□ 0.37
UBE2D3-205ENST00000350435 CUX1P39880 1505 aa17.35■□□□□ 0.37
UBE2D3-205ENST00000350435 JPH4Q96JJ6 628 aa17.33■□□□□ 0.36
UBE2D3-205ENST00000350435 COL17A1Q9UMD9 1497 aaPredicted RBP17.31■□□□□ 0.36
UBE2D3-205ENST00000350435 CERKQ8TCT0 537 aa17.3■□□□□ 0.36
UBE2D3-205ENST00000350435 ABCA10Q8WWZ4 1543 aa17.3■□□□□ 0.36
UBE2D3-205ENST00000350435 GLI2P10070 1586 aa17.28■□□□□ 0.36
UBE2D3-205ENST00000350435 FHAD1B1AJZ9 1412 aa17.25■□□□□ 0.35
UBE2D3-205ENST00000350435 TEX14Q8IWB6 1497 aa17.22■□□□□ 0.35
UBE2D3-205ENST00000350435 PCF11O94913 1555 aaKnown RBP17.21■□□□□ 0.35
UBE2D3-205ENST00000350435 PLB1Q6P1J6 1458 aa17.18■□□□□ 0.34
UBE2D3-205ENST00000350435 KIF21BO75037 1637 aa17.18■□□□□ 0.34
UBE2D3-205ENST00000350435 MAP3K4Q9Y6R4 1608 aa17.17■□□□□ 0.34
UBE2D3-205ENST00000350435 PTPRMP28827 1452 aa17.17■□□□□ 0.34
UBE2D3-205ENST00000350435 ASXL2Q76L83 1435 aa17.16■□□□□ 0.34
UBE2D3-205ENST00000350435 RUSC2Q8N2Y8 1516 aa17.16■□□□□ 0.34
UBE2D3-205ENST00000350435 CUL7Q14999 1698 aa17.1■□□□□ 0.33
UBE2D3-205ENST00000350435 ABCC2Q92887 1545 aa17.1■□□□□ 0.33
UBE2D3-205ENST00000350435 ADAMTSL3P82987 1691 aa17.07■□□□□ 0.32
UBE2D3-205ENST00000350435 ERICH3Q5RHP9 1530 aa17.07■□□□□ 0.32
UBE2D3-205ENST00000350435 EPRSP07814 1512 aaKnown RBP17.05■□□□□ 0.32
UBE2D3-205ENST00000350435 KIAA0586Q9BVV6 1533 aa17.05■□□□□ 0.32
UBE2D3-205ENST00000350435 PTPRGP23470 1445 aa17.02■□□□□ 0.31
UBE2D3-205ENST00000350435 HSPA2P54652 639 aa17.01■□□□□ 0.31
UBE2D3-205ENST00000350435 TTBK1Q5TCY1 1321 aaPredicted RBP17■□□□□ 0.31
UBE2D3-205ENST00000350435 WRNQ14191 1432 aaPredicted RBP eCLIP16.99■□□□□ 0.31
UBE2D3-205ENST00000350435 MADDQ8WXG6 1647 aa16.95■□□□□ 0.3
UBE2D3-205ENST00000350435 BCORL1Q5H9F3 1711 aa16.93■□□□□ 0.3
UBE2D3-205ENST00000350435 UHRF1BP1LA0JNW5 1464 aa16.91■□□□□ 0.3
UBE2D3-205ENST00000350435 RIMS1Q86UR5 1692 aaKnown RBP16.89■□□□□ 0.29
UBE2D3-205ENST00000350435 TNIKQ9UKE5 1360 aa16.88■□□□□ 0.29
UBE2D3-205ENST00000350435 CFAP43Q8NDM7 1665 aa16.87■□□□□ 0.29
UBE2D3-205ENST00000350435 MAGI3Q5TCQ9 1506 aa16.86■□□□□ 0.29
UBE2D3-205ENST00000350435 ZCCHC11Q5TAX3 1644 aaKnown RBP16.86■□□□□ 0.29
UBE2D3-205ENST00000350435 KDM5BQ9UGL1 1544 aa16.85■□□□□ 0.29
UBE2D3-205ENST00000350435 CARMIL2Q6F5E8 1435 aa16.84■□□□□ 0.29
UBE2D3-205ENST00000350435 CD109Q6YHK3 1445 aa16.84■□□□□ 0.29
UBE2D3-205ENST00000350435 UACAQ9BZF9 1416 aa16.84■□□□□ 0.29
UBE2D3-205ENST00000350435 ARID4BQ4LE39 1312 aaPredicted RBP16.83■□□□□ 0.28
UBE2D3-205ENST00000350435 PLPPR3Q6T4P5 718 aa16.81■□□□□ 0.28
UBE2D3-205ENST00000350435 DMRT2Q9Y5R5 561 aa16.8■□□□□ 0.28
UBE2D3-205ENST00000350435 WDR7Q9Y4E6 1490 aa16.8■□□□□ 0.28
UBE2D3-205ENST00000350435 BIVM-ERCC5R4GMW8 1640 aa16.78■□□□□ 0.28
UBE2D3-205ENST00000350435 ARAP3Q8WWN8 1544 aa16.77■□□□□ 0.28
UBE2D3-205ENST00000350435 YEATS2Q9ULM3 1422 aa16.73■□□□□ 0.27
UBE2D3-205ENST00000350435 IQSEC2Q5JU85 1478 aa16.73■□□□□ 0.27
UBE2D3-205ENST00000350435 STRCQ7RTU9 1775 aa16.72■□□□□ 0.27
UBE2D3-205ENST00000350435 MED1Q15648 1581 aaPredicted RBP16.7■□□□□ 0.26
UBE2D3-205ENST00000350435 KCNH8Q96L42 1107 aa16.69■□□□□ 0.26
UBE2D3-205ENST00000350435 PREX1Q8TCU6 1659 aa16.69■□□□□ 0.26
UBE2D3-205ENST00000350435 LTBP4Q8N2S1 1624 aa16.63■□□□□ 0.25
UBE2D3-205ENST00000350435 RAPGEF3O95398 923 aa16.62■□□□□ 0.25
UBE2D3-205ENST00000350435 PHLDB1Q86UU1 1377 aa16.62■□□□□ 0.25
UBE2D3-205ENST00000350435 IQGAP2Q13576 1575 aa16.61■□□□□ 0.25
UBE2D3-205ENST00000350435 FER1L4A9Z1Z3 1794 aa16.61■□□□□ 0.25
UBE2D3-205ENST00000350435 POGZQ7Z3K3 1410 aa16.61■□□□□ 0.25
UBE2D3-205ENST00000350435 PTPRTO14522 1441 aa16.6■□□□□ 0.25
UBE2D3-205ENST00000350435 UBAP1LF5GYI3 381 aa16.59■□□□□ 0.25
UBE2D3-205ENST00000350435 FOXD1Q16676 465 aa16.59■□□□□ 0.25
UBE2D3-205ENST00000350435 DISP1Q96F81 1524 aa16.58■□□□□ 0.24
UBE2D3-205ENST00000350435 TTC37Q6PGP7 1564 aa16.57■□□□□ 0.24
UBE2D3-205ENST00000350435 ARHGEF40Q8TER5 1519 aa16.57■□□□□ 0.24
UBE2D3-205ENST00000350435 FANCAO15360 1455 aa16.55■□□□□ 0.24
UBE2D3-205ENST00000350435 FRMPD1Q5SYB0 1578 aa16.55■□□□□ 0.24
UBE2D3-205ENST00000350435 UHRF1BP1Q6BDS2 1440 aa16.5■□□□□ 0.23
UBE2D3-205ENST00000350435 IGF1RP08069 1367 aa16.5■□□□□ 0.23
UBE2D3-205ENST00000350435 NEO1Q92859 1461 aa16.49■□□□□ 0.23
UBE2D3-205ENST00000350435 SETD1BQ9UPS6 1966 aaKnown RBP16.49■□□□□ 0.23
UBE2D3-205ENST00000350435 MLECQ14165 292 aa16.48■□□□□ 0.23
UBE2D3-205ENST00000350435 KIAA0556O60303 1618 aa16.47■□□□□ 0.23
UBE2D3-205ENST00000350435 HSPA1LP34931 641 aa16.46■□□□□ 0.23
UBE2D3-205ENST00000350435 AKNAQ7Z591 1439 aa16.45■□□□□ 0.22
UBE2D3-205ENST00000350435 ABCA9Q8IUA7 1624 aa16.45■□□□□ 0.22
UBE2D3-205ENST00000350435 SIGLEC1Q9BZZ2 1709 aa16.45■□□□□ 0.22
UBE2D3-205ENST00000350435 SCAF1Q9H7N4 1312 aaKnown RBP16.44■□□□□ 0.22
UBE2D3-205ENST00000350435 RICTORQ6R327 1708 aa16.42■□□□□ 0.22
UBE2D3-205ENST00000350435 UGGT2Q9NYU1 1516 aa16.42■□□□□ 0.22
UBE2D3-205ENST00000350435 CEBPAP49715 358 aaPredicted RBP16.41■□□□□ 0.22
UBE2D3-205ENST00000350435 CARMIL1Q5VZK9 1371 aa16.39■□□□□ 0.21
UBE2D3-205ENST00000350435 KIF27Q86VH2 1401 aa16.39■□□□□ 0.21
UBE2D3-205ENST00000350435 DENND4BO75064 1496 aaPredicted RBP16.37■□□□□ 0.21
UBE2D3-205ENST00000350435 EFCAB5A4FU69 1503 aa16.37■□□□□ 0.21
UBE2D3-205ENST00000350435 ZFYVE16Q7Z3T8 1539 aa16.37■□□□□ 0.21
UBE2D3-205ENST00000350435 ABCA8O94911 1581 aa16.37■□□□□ 0.21
UBE2D3-205ENST00000350435 ARHGEF12Q9NZN5 1544 aa16.36■□□□□ 0.21
UBE2D3-205ENST00000350435 PIP4K2BP78356 416 aa16.35■□□□□ 0.21
UBE2D3-205ENST00000350435 ZNF335Q9H4Z2 1342 aaPredicted RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms