RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 P3H3Q8IVL6 736 aa20.88■□□□□ 0.93
UBA3-201ENST00000349511 ADAMTS12P58397 1594 aa20.88■□□□□ 0.93
UBA3-201ENST00000349511 FBLN2P98095 1184 aa20.86■□□□□ 0.93
UBA3-201ENST00000349511 ARHGAP35Q9NRY4 1499 aa20.85■□□□□ 0.93
UBA3-201ENST00000349511 ARAP1Q96P48 1450 aa20.84■□□□□ 0.93
UBA3-201ENST00000349511 CTTNBP2Q8WZ74 1663 aa20.83■□□□□ 0.93
UBA3-201ENST00000349511 VPS8Q8N3P4 1428 aa20.83■□□□□ 0.93
UBA3-201ENST00000349511 CHMP7Q8WUX9 453 aaPredicted RBP20.8■□□□□ 0.92
UBA3-201ENST00000349511 MAGI1Q96QZ7 1491 aaPredicted RBP20.76■□□□□ 0.91
UBA3-201ENST00000349511 GRIN2AQ12879 1464 aa20.74■□□□□ 0.91
UBA3-201ENST00000349511 FHOD3Q2V2M9 1422 aa20.72■□□□□ 0.91
UBA3-201ENST00000349511 APLP2Q06481 763 aa20.72■□□□□ 0.91
UBA3-201ENST00000349511 SYNJ2O15056 1496 aa20.71■□□□□ 0.91
UBA3-201ENST00000349511 ATP1B4Q9UN42 357 aaPredicted RBP20.67■□□□□ 0.9
UBA3-201ENST00000349511 IQGAP2Q13576 1575 aa20.66■□□□□ 0.9
UBA3-201ENST00000349511 CEP170Q5SW79 1584 aa20.63■□□□□ 0.89
UBA3-201ENST00000349511 EFCAB5A4FU69 1503 aa20.63■□□□□ 0.89
UBA3-201ENST00000349511 KIAA0586Q9BVV6 1533 aa20.61■□□□□ 0.89
UBA3-201ENST00000349511 ZEB1P37275 1124 aaPredicted RBP20.6■□□□□ 0.89
UBA3-201ENST00000349511 SAMD9Q5K651 1589 aa20.59■□□□□ 0.89
UBA3-201ENST00000349511 KANK4Q5T7N3 995 aaPredicted RBP20.59■□□□□ 0.89
UBA3-201ENST00000349511 CHD1O14646 1710 aa20.55■□□□□ 0.88
UBA3-201ENST00000349511 PCF11O94913 1555 aaKnown RBP20.55■□□□□ 0.88
UBA3-201ENST00000349511 NUP160Q12769 1436 aa20.54■□□□□ 0.88
UBA3-201ENST00000349511 JPH4Q96JJ6 628 aa20.51■□□□□ 0.87
UBA3-201ENST00000349511 UGGT2Q9NYU1 1516 aa20.51■□□□□ 0.87
UBA3-201ENST00000349511 FMN1Q68DA7 1419 aa20.51■□□□□ 0.87
UBA3-201ENST00000349511 DISP1Q96F81 1524 aa20.49■□□□□ 0.87
UBA3-201ENST00000349511 CASKIN1Q8WXD9 1431 aa20.46■□□□□ 0.87
UBA3-201ENST00000349511 ARID3CA6NKF2 412 aa20.45■□□□□ 0.86
UBA3-201ENST00000349511 KIAA0556O60303 1618 aa20.45■□□□□ 0.86
UBA3-201ENST00000349511 FYCO1Q9BQS8 1478 aa20.44■□□□□ 0.86
UBA3-201ENST00000349511 TIAM1Q13009 1591 aa20.44■□□□□ 0.86
UBA3-201ENST00000349511 LRRIQ1Q96JM4 1722 aa20.38■□□□□ 0.85
UBA3-201ENST00000349511 LRRC9Q6ZRR7 1453 aa20.37■□□□□ 0.85
UBA3-201ENST00000349511 CARMIL2Q6F5E8 1435 aa20.36■□□□□ 0.85
UBA3-201ENST00000349511 PRG4Q92954 1404 aaPredicted RBP20.36■□□□□ 0.85
UBA3-201ENST00000349511 CFAP43Q8NDM7 1665 aa20.35■□□□□ 0.85
UBA3-201ENST00000349511 MAP3K1Q13233 1512 aa20.35■□□□□ 0.85
UBA3-201ENST00000349511 HNRNPUL2Q1KMD3 747 aaKnown RBP20.3■□□□□ 0.84
UBA3-201ENST00000349511 PLB1Q6P1J6 1458 aa20.29■□□□□ 0.84
UBA3-201ENST00000349511 CDK13Q14004 1512 aaKnown RBP20.29■□□□□ 0.84
UBA3-201ENST00000349511 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.29■□□□□ 0.84
UBA3-201ENST00000349511 HECW1Q76N89 1606 aa20.29■□□□□ 0.84
UBA3-201ENST00000349511 MTUS2Q5JR59 1369 aa20.28■□□□□ 0.84
UBA3-201ENST00000349511 EPRSP07814 1512 aaKnown RBP20.27■□□□□ 0.83
UBA3-201ENST00000349511 ERCC6L2Q5T890 1561 aa20.26■□□□□ 0.83
UBA3-201ENST00000349511 RAPGEF6Q8TEU7 1601 aa20.25■□□□□ 0.83
UBA3-201ENST00000349511 PHLDB1Q86UU1 1377 aa20.25■□□□□ 0.83
UBA3-201ENST00000349511 CLASP1Q7Z460 1538 aa20.24■□□□□ 0.83
UBA3-201ENST00000349511 NUP153P49790 1475 aaKnown RBP20.23■□□□□ 0.83
UBA3-201ENST00000349511 SHROOM2Q13796 1616 aa20.23■□□□□ 0.83
UBA3-201ENST00000349511 CCDC18Q5T9S5 1454 aa20.22■□□□□ 0.83
UBA3-201ENST00000349511 MAGI3Q5TCQ9 1506 aa20.22■□□□□ 0.83
UBA3-201ENST00000349511 PTPRGP23470 1445 aa20.22■□□□□ 0.83
UBA3-201ENST00000349511 ITGAEP38570 1179 aa20.2■□□□□ 0.82
UBA3-201ENST00000349511 OSCARQ8IYS5 282 aa20.18■□□□□ 0.82
UBA3-201ENST00000349511 CCNB3Q8WWL7 1395 aa20.17■□□□□ 0.82
UBA3-201ENST00000349511 RRBP1Q9P2E9 1410 aaKnown RBP20.17■□□□□ 0.82
UBA3-201ENST00000349511 FAM50AQ14320 339 aaKnown RBP20.15■□□□□ 0.82
UBA3-201ENST00000349511 EHBP1L1Q8N3D4 1523 aa20.14■□□□□ 0.81
UBA3-201ENST00000349511 NCOA2Q15596 1464 aa20.13■□□□□ 0.81
UBA3-201ENST00000349511 ABCA8O94911 1581 aa20.13■□□□□ 0.81
UBA3-201ENST00000349511 SUPT6HQ7KZ85 1726 aaKnown RBP20.11■□□□□ 0.81
UBA3-201ENST00000349511 CCER1Q8TC90 406 aaPredicted RBP20.09■□□□□ 0.81
UBA3-201ENST00000349511 CDK11AQ9UQ88 783 aaPredicted RBP20.09■□□□□ 0.81
UBA3-201ENST00000349511 ATP10BO94823 1461 aa20.08■□□□□ 0.8
UBA3-201ENST00000349511 UACAQ9BZF9 1416 aa20.07■□□□□ 0.8
UBA3-201ENST00000349511 FGD6Q6ZV73 1430 aa20.04■□□□□ 0.8
UBA3-201ENST00000349511 PLEKHD1A6NEE1 506 aa20.03■□□□□ 0.8
UBA3-201ENST00000349511 MYOM3Q5VTT5 1437 aa20.02■□□□□ 0.8
UBA3-201ENST00000349511 ARHGEF11O15085 1522 aa20.02■□□□□ 0.79
UBA3-201ENST00000349511 TROQ12816 1431 aaPredicted RBP20■□□□□ 0.79
UBA3-201ENST00000349511 ABCC2Q92887 1545 aa19.98■□□□□ 0.79
UBA3-201ENST00000349511 KIF14Q15058 1648 aa19.97■□□□□ 0.79
UBA3-201ENST00000349511 PTPN23Q9H3S7 1636 aa19.93■□□□□ 0.78
UBA3-201ENST00000349511 ZNF644Q9H582 1327 aaPredicted RBP19.92■□□□□ 0.78
UBA3-201ENST00000349511 KCNH8Q96L42 1107 aa19.91■□□□□ 0.78
UBA3-201ENST00000349511 ZNF777Q9ULD5 760 aaPredicted RBP19.9■□□□□ 0.78
UBA3-201ENST00000349511 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.88■□□□□ 0.77
UBA3-201ENST00000349511 PTPRKQ15262 1439 aa19.88■□□□□ 0.77
UBA3-201ENST00000349511 CFDP1Q9UEE9 299 aaPredicted RBP19.88■□□□□ 0.77
UBA3-201ENST00000349511 ZCCHC11Q5TAX3 1644 aaKnown RBP19.88■□□□□ 0.77
UBA3-201ENST00000349511 CHIC2Q9UKJ5 165 aa19.87■□□□□ 0.77
UBA3-201ENST00000349511 ADCY10Q96PN6 1610 aa19.87■□□□□ 0.77
UBA3-201ENST00000349511 UHRF1BP1LA0JNW5 1464 aa19.86■□□□□ 0.77
UBA3-201ENST00000349511 GPATCH8Q9UKJ3 1502 aaKnown RBP19.86■□□□□ 0.77
UBA3-201ENST00000349511 MIA2Q96PC5 1412 aa19.86■□□□□ 0.77
UBA3-201ENST00000349511 SCAF1Q9H7N4 1312 aaKnown RBP19.85■□□□□ 0.77
UBA3-201ENST00000349511 KDM5BQ9UGL1 1544 aa19.84■□□□□ 0.77
UBA3-201ENST00000349511 TCOF1Q13428 1488 aaKnown RBP19.83■□□□□ 0.77
UBA3-201ENST00000349511 RAB3GAP2Q9H2M9 1393 aa19.83■□□□□ 0.76
UBA3-201ENST00000349511 ABCC10Q5T3U5 1492 aa19.82■□□□□ 0.76
UBA3-201ENST00000349511 CDC42BPAQ5VT25 1732 aa19.81■□□□□ 0.76
UBA3-201ENST00000349511 SETD5Q9C0A6 1442 aa19.8■□□□□ 0.76
UBA3-201ENST00000349511 ITSN2Q9NZM3 1697 aa19.79■□□□□ 0.76
UBA3-201ENST00000349511 RRP7BPQ9NSQ0 103 aa19.79■□□□□ 0.76
UBA3-201ENST00000349511 CYB5RLQ6IPT4 315 aa19.78■□□□□ 0.76
UBA3-201ENST00000349511 CAMSAP2Q08AD1 1489 aa19.77■□□□□ 0.76
UBA3-201ENST00000349511 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms