RNA–Protein interactions for RNA: ENST00000348549.9

CASP9-202, Transcript of caspase 9, humanhuman

TSL 1 (best) BASIC

Gene CASP9, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP9-202ENST00000348549 ARAP1Q96P48 1450 aa38.39■■■■□ 3.74
CASP9-202ENST00000348549 SYNJ2O15056 1496 aa38.35■■■■□ 3.73
CASP9-202ENST00000348549 GRIN2AQ12879 1464 aa38.33■■■■□ 3.73
CASP9-202ENST00000348549 EFCAB5A4FU69 1503 aa38.31■■■■□ 3.72
CASP9-202ENST00000348549 IQGAP2Q13576 1575 aa38.21■■■■□ 3.71
CASP9-202ENST00000348549 SAMD9Q5K651 1589 aa38.17■■■■□ 3.7
CASP9-202ENST00000348549 CHMP7Q8WUX9 453 aaPredicted RBP38.17■■■■□ 3.7
CASP9-202ENST00000348549 KIAA0586Q9BVV6 1533 aa38.15■■■■□ 3.7
CASP9-202ENST00000348549 CEP170Q5SW79 1584 aa38.08■■■■□ 3.69
CASP9-202ENST00000348549 NUP160Q12769 1436 aa38.08■■■■□ 3.69
CASP9-202ENST00000348549 UGGT2Q9NYU1 1516 aa38.05■■■■□ 3.68
CASP9-202ENST00000348549 TRIM26Q12899 539 aaPredicted RBP38.02■■■■□ 3.68
CASP9-202ENST00000348549 FHOD3Q2V2M9 1422 aa38.01■■■■□ 3.67
CASP9-202ENST00000348549 FBLN2P98095 1184 aa38■■■■□ 3.67
CASP9-202ENST00000348549 CHD1O14646 1710 aa37.97■■■■□ 3.67
CASP9-202ENST00000348549 APLP2Q06481 763 aa37.94■■■■□ 3.66
CASP9-202ENST00000348549 P3H3Q8IVL6 736 aa37.94■■■■□ 3.66
CASP9-202ENST00000348549 FMN1Q68DA7 1419 aa37.92■■■■□ 3.66
CASP9-202ENST00000348549 PPARGC1BQ86YN6 1023 aaKnown RBP37.91■■■■□ 3.66
CASP9-202ENST00000348549 PCGF6Q9BYE7 350 aa37.87■■■■□ 3.65
CASP9-202ENST00000348549 PCF11O94913 1555 aaKnown RBP37.86■■■■□ 3.65
CASP9-202ENST00000348549 MAP3K1Q13233 1512 aa37.85■■■■□ 3.65
CASP9-202ENST00000348549 FYCO1Q9BQS8 1478 aa37.84■■■■□ 3.65
CASP9-202ENST00000348549 CASKIN1Q8WXD9 1431 aa37.83■■■■□ 3.65
CASP9-202ENST00000348549 DISP1Q96F81 1524 aa37.82■■■■□ 3.64
CASP9-202ENST00000348549 KIAA0556O60303 1618 aa37.82■■■■□ 3.64
CASP9-202ENST00000348549 TIAM1Q13009 1591 aa37.74■■■■□ 3.63
CASP9-202ENST00000348549 JPH4Q96JJ6 628 aa37.71■■■■□ 3.63
CASP9-202ENST00000348549 CFAP43Q8NDM7 1665 aa37.7■■■■□ 3.63
CASP9-202ENST00000348549 CARMIL2Q6F5E8 1435 aa37.66■■■■□ 3.62
CASP9-202ENST00000348549 TTBK1Q5TCY1 1321 aaPredicted RBP37.61■■■■□ 3.61
CASP9-202ENST00000348549 SHROOM2Q13796 1616 aa37.61■■■■□ 3.61
CASP9-202ENST00000348549 KANK4Q5T7N3 995 aaPredicted RBP37.59■■■■□ 3.61
CASP9-202ENST00000348549 CLASP1Q7Z460 1538 aa37.56■■■■□ 3.6
CASP9-202ENST00000348549 HECW1Q76N89 1606 aa37.55■■■■□ 3.6
CASP9-202ENST00000348549 LRRIQ1Q96JM4 1722 aa37.54■■■■□ 3.6
CASP9-202ENST00000348549 LRRC9Q6ZRR7 1453 aa37.53■■■■□ 3.6
CASP9-202ENST00000348549 ATP1B4Q9UN42 357 aaPredicted RBP37.51■■■■□ 3.6
CASP9-202ENST00000348549 PRG4Q92954 1404 aaPredicted RBP37.48■■■■□ 3.59
CASP9-202ENST00000348549 CCDC18Q5T9S5 1454 aa37.48■■■■□ 3.59
CASP9-202ENST00000348549 RAPGEF6Q8TEU7 1601 aa37.44■■■■□ 3.58
CASP9-202ENST00000348549 EPRSP07814 1512 aaKnown RBP37.38■■■■□ 3.57
CASP9-202ENST00000348549 NUP153P49790 1475 aaKnown RBP37.32■■■■□ 3.56
CASP9-202ENST00000348549 ABCA8O94911 1581 aa37.3■■■■□ 3.56
CASP9-202ENST00000348549 PLB1Q6P1J6 1458 aa37.28■■■■□ 3.56
CASP9-202ENST00000348549 EHBP1L1Q8N3D4 1523 aa37.27■■■■□ 3.56
CASP9-202ENST00000348549 PTPRGP23470 1445 aa37.26■■■■□ 3.55
CASP9-202ENST00000348549 RRBP1Q9P2E9 1410 aaKnown RBP37.26■■■■□ 3.55
CASP9-202ENST00000348549 MTUS2Q5JR59 1369 aa37.25■■■■□ 3.55
CASP9-202ENST00000348549 CDK13Q14004 1512 aaKnown RBP37.24■■■■□ 3.55
CASP9-202ENST00000348549 ERCC6L2Q5T890 1561 aa37.23■■■■□ 3.55
CASP9-202ENST00000348549 MAGI3Q5TCQ9 1506 aa37.19■■■■□ 3.54
CASP9-202ENST00000348549 SUPT6HQ7KZ85 1726 aaKnown RBP37.17■■■■□ 3.54
CASP9-202ENST00000348549 OSCARQ8IYS5 282 aa37.16■■■■□ 3.54
CASP9-202ENST00000348549 PHLDB1Q86UU1 1377 aa37.14■■■■□ 3.54
CASP9-202ENST00000348549 CCNB3Q8WWL7 1395 aa37.11■■■■□ 3.53
CASP9-202ENST00000348549 ARHGEF11O15085 1522 aa37.08■■■■□ 3.53
CASP9-202ENST00000348549 NCOA2Q15596 1464 aa37.08■■■■□ 3.53
CASP9-202ENST00000348549 UACAQ9BZF9 1416 aa37.07■■■■□ 3.52
CASP9-202ENST00000348549 CDK11AQ9UQ88 783 aaPredicted RBP37.06■■■■□ 3.52
CASP9-202ENST00000348549 ARID3CA6NKF2 412 aa37.02■■■■□ 3.52
CASP9-202ENST00000348549 ATP10BO94823 1461 aa37■■■■□ 3.51
CASP9-202ENST00000348549 ABCC2Q92887 1545 aa36.98■■■■□ 3.51
CASP9-202ENST00000348549 TROQ12816 1431 aaPredicted RBP36.96■■■■□ 3.51
CASP9-202ENST00000348549 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.95■■■■□ 3.55e-12■■■□□ 17.9
CASP9-202ENST00000348549 MYOM3Q5VTT5 1437 aa36.94■■■■□ 3.5
CASP9-202ENST00000348549 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.94■■■■□ 3.5
CASP9-202ENST00000348549 HNRNPUL2Q1KMD3 747 aaKnown RBP36.94■■■■□ 3.5
CASP9-202ENST00000348549 UHRF1BP1LA0JNW5 1464 aa36.94■■■■□ 3.5
CASP9-202ENST00000348549 FGD6Q6ZV73 1430 aa36.93■■■■□ 3.5
CASP9-202ENST00000348549 ADCY10Q96PN6 1610 aa36.92■■■■□ 3.5
CASP9-202ENST00000348549 PLEKHD1A6NEE1 506 aa36.81■■■■□ 3.48
CASP9-202ENST00000348549 MIA2Q96PC5 1412 aa36.79■■■■□ 3.48
CASP9-202ENST00000348549 PTPN23Q9H3S7 1636 aa36.76■■■■□ 3.48
CASP9-202ENST00000348549 KDM5BQ9UGL1 1544 aa36.76■■■■□ 3.48
CASP9-202ENST00000348549 KIF14Q15058 1648 aa36.76■■■■□ 3.48
CASP9-202ENST00000348549 HRCP23327 699 aa36.75■■■■□ 3.47
CASP9-202ENST00000348549 FAM50AQ14320 339 aaKnown RBP36.75■■■■□ 3.47
CASP9-202ENST00000348549 TCOF1Q13428 1488 aaKnown RBP36.75■■■■□ 3.47
CASP9-202ENST00000348549 ZCCHC11Q5TAX3 1644 aaKnown RBP36.72■■■■□ 3.47
CASP9-202ENST00000348549 ITSN2Q9NZM3 1697 aa36.71■■■■□ 3.47
CASP9-202ENST00000348549 ABCC10Q5T3U5 1492 aa36.66■■■■□ 3.46
CASP9-202ENST00000348549 GPATCH8Q9UKJ3 1502 aaKnown RBP36.62■■■■□ 3.45
CASP9-202ENST00000348549 ITGAEP38570 1179 aa36.59■■■■□ 3.45
CASP9-202ENST00000348549 CDC42BPAQ5VT25 1732 aa36.58■■■■□ 3.45
CASP9-202ENST00000348549 ZEB1P37275 1124 aaPredicted RBP36.48■■■■□ 3.43
CASP9-202ENST00000348549 CFDP1Q9UEE9 299 aaPredicted RBP36.48■■■■□ 3.43
CASP9-202ENST00000348549 CCER1Q8TC90 406 aaPredicted RBP36.47■■■■□ 3.43
CASP9-202ENST00000348549 PTPRKQ15262 1439 aa36.46■■■■□ 3.43
CASP9-202ENST00000348549 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.45■■■■□ 3.43
CASP9-202ENST00000348549 PREX2Q70Z35 1606 aa36.44■■■■□ 3.42
CASP9-202ENST00000348549 SETD5Q9C0A6 1442 aa36.44■■■■□ 3.42
CASP9-202ENST00000348549 CAMSAP2Q08AD1 1489 aa36.43■■■■□ 3.42
CASP9-202ENST00000348549 TTC37Q6PGP7 1564 aa36.42■■■■□ 3.42
CASP9-202ENST00000348549 DNMT1P26358 1616 aaKnown RBP36.42■■■■□ 3.42
CASP9-202ENST00000348549 RIMBP3CA6NJZ7 1639 aa36.4■■■■□ 3.42
CASP9-202ENST00000348549 RIMBP3BA6NNM3 1639 aa36.4■■■■□ 3.42
CASP9-202ENST00000348549 RIMBP3Q9UFD9 1639 aa36.4■■■■□ 3.42
CASP9-202ENST00000348549 WDR7Q9Y4E6 1490 aa36.39■■■■□ 3.42
CASP9-202ENST00000348549 CDC42BPBQ9Y5S2 1711 aa36.39■■■■□ 3.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms