RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 PRG4Q92954 1404 aaPredicted RBP27.52■■■□□ 2
RAB5C-201ENST00000346213 JPH4Q96JJ6 628 aa27.49■■□□□ 1.99
RAB5C-201ENST00000346213 KIAA0586Q9BVV6 1533 aa27.49■■□□□ 1.99
RAB5C-201ENST00000346213 RAPGEF2Q9Y4G8 1499 aa27.39■■□□□ 1.98
RAB5C-201ENST00000346213 PRXQ9BXM0 1461 aa27.34■■□□□ 1.97
RAB5C-201ENST00000346213 IQGAP2Q13576 1575 aa27.32■■□□□ 1.96
RAB5C-201ENST00000346213 DISP1Q96F81 1524 aa27.25■■□□□ 1.95
RAB5C-201ENST00000346213 CHIC1Q5VXU3 224 aa27.23■■□□□ 1.95
RAB5C-201ENST00000346213 ADCY10Q96PN6 1610 aa27.22■■□□□ 1.95
RAB5C-201ENST00000346213 TRHP20396 242 aaPredicted RBP27.2■■□□□ 1.94
RAB5C-201ENST00000346213 UGGT2Q9NYU1 1516 aa27.19■■□□□ 1.94
RAB5C-201ENST00000346213 CTTNBP2Q8WZ74 1663 aa27.15■■□□□ 1.94
RAB5C-201ENST00000346213 CSRNP3Q8WYN3 585 aa27.14■■□□□ 1.93
RAB5C-201ENST00000346213 KIAA0556O60303 1618 aa27.11■■□□□ 1.93
RAB5C-201ENST00000346213 TTBK1Q5TCY1 1321 aaPredicted RBP27.11■■□□□ 1.93
RAB5C-201ENST00000346213 FAM9AQ8IZU1 332 aaPredicted RBP27.11■■□□□ 1.93
RAB5C-201ENST00000346213 PTPRGP23470 1445 aa27.1■■□□□ 1.93
RAB5C-201ENST00000346213 TNIKQ9UKE5 1360 aa27.1■■□□□ 1.93
RAB5C-201ENST00000346213 CARMIL2Q6F5E8 1435 aa27.07■■□□□ 1.92
RAB5C-201ENST00000346213 EEA1Q15075 1411 aa27.05■■□□□ 1.92
RAB5C-201ENST00000346213 MAPKBP1O60336 1514 aa26.98■■□□□ 1.91
RAB5C-201ENST00000346213 KIF13AQ9H1H9 1805 aa26.97■■□□□ 1.91
RAB5C-201ENST00000346213 UACAQ9BZF9 1416 aa26.94■■□□□ 1.9
RAB5C-201ENST00000346213 ABCC2Q92887 1545 aa26.93■■□□□ 1.9
RAB5C-201ENST00000346213 UHRF1BP1LA0JNW5 1464 aa26.93■■□□□ 1.9
RAB5C-201ENST00000346213 KIF21BO75037 1637 aa26.92■■□□□ 1.9
RAB5C-201ENST00000346213 PLB1Q6P1J6 1458 aa26.91■■□□□ 1.9
RAB5C-201ENST00000346213 DIP2BQ9P265 1576 aa26.9■■□□□ 1.9
RAB5C-201ENST00000346213 ABCC10Q5T3U5 1492 aa26.9■■□□□ 1.9
RAB5C-201ENST00000346213 SAMD9Q5K651 1589 aa26.87■■□□□ 1.89
RAB5C-201ENST00000346213 GOLGA3Q08378 1498 aa26.86■■□□□ 1.89
RAB5C-201ENST00000346213 KDM5BQ9UGL1 1544 aa26.84■■□□□ 1.89
RAB5C-201ENST00000346213 ABCA8O94911 1581 aa26.84■■□□□ 1.89
RAB5C-201ENST00000346213 P3H3Q8IVL6 736 aa26.84■■□□□ 1.89
RAB5C-201ENST00000346213 EHMT2Q96KQ7 1210 aa26.84■■□□□ 1.89
RAB5C-201ENST00000346213 NPM1P06748 294 aaKnown RBP eCLIP26.82■■□□□ 1.88
RAB5C-201ENST00000346213 ASXL2Q76L83 1435 aa26.81■■□□□ 1.88
RAB5C-201ENST00000346213 ZCCHC11Q5TAX3 1644 aaKnown RBP26.8■■□□□ 1.88
RAB5C-201ENST00000346213 FAM69CQ0P6D2 419 aa26.79■■□□□ 1.88
RAB5C-201ENST00000346213 RANGAP1P46060 587 aaPredicted RBP26.76■■□□□ 1.87
RAB5C-201ENST00000346213 FHOD3Q2V2M9 1422 aa26.73■■□□□ 1.87
RAB5C-201ENST00000346213 EPRSP07814 1512 aaKnown RBP26.66■■□□□ 1.86
RAB5C-201ENST00000346213 ARID3CA6NKF2 412 aa26.65■■□□□ 1.86
RAB5C-201ENST00000346213 PPRC1Q5VV67 1664 aaKnown RBP26.65■■□□□ 1.86
RAB5C-201ENST00000346213 GLI2P10070 1586 aa26.63■■□□□ 1.85
RAB5C-201ENST00000346213 ATP10BO94823 1461 aa26.62■■□□□ 1.85
RAB5C-201ENST00000346213 WDR7Q9Y4E6 1490 aa26.61■■□□□ 1.85
RAB5C-201ENST00000346213 TSPOAP1O95153 1857 aa26.61■■□□□ 1.85
RAB5C-201ENST00000346213 RAPGEF6Q8TEU7 1601 aa26.6■■□□□ 1.85
RAB5C-201ENST00000346213 EFCAB5A4FU69 1503 aa26.59■■□□□ 1.85
RAB5C-201ENST00000346213 NUP153P49790 1475 aaKnown RBP26.59■■□□□ 1.85
RAB5C-201ENST00000346213 UBTFP17480 764 aaKnown RBP26.59■■□□□ 1.85
RAB5C-201ENST00000346213 ARHGAP35Q9NRY4 1499 aa26.58■■□□□ 1.85
RAB5C-201ENST00000346213 MAP3K4Q9Y6R4 1608 aa26.56■■□□□ 1.84
RAB5C-201ENST00000346213 COL17A1Q9UMD9 1497 aaPredicted RBP26.46■■□□□ 1.83
RAB5C-201ENST00000346213 KCNH8Q96L42 1107 aa26.44■■□□□ 1.82
RAB5C-201ENST00000346213 KDM6BO15054 1643 aa26.44■■□□□ 1.82
RAB5C-201ENST00000346213 CDK13Q14004 1512 aaKnown RBP26.41■■□□□ 1.82
RAB5C-201ENST00000346213 CFAP43Q8NDM7 1665 aa26.36■■□□□ 1.81
RAB5C-201ENST00000346213 CD109Q6YHK3 1445 aa26.35■■□□□ 1.81
RAB5C-201ENST00000346213 MAGI3Q5TCQ9 1506 aa26.33■■□□□ 1.81
RAB5C-201ENST00000346213 ABCA9Q8IUA7 1624 aa26.32■■□□□ 1.8
RAB5C-201ENST00000346213 LRRIQ1Q96JM4 1722 aa26.31■■□□□ 1.8
RAB5C-201ENST00000346213 FMN1Q68DA7 1419 aa26.3■■□□□ 1.8
RAB5C-201ENST00000346213 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.28■■□□□ 1.8
RAB5C-201ENST00000346213 HNRNPUL2Q1KMD3 747 aaKnown RBP26.28■■□□□ 1.8
RAB5C-201ENST00000346213 TEX14Q8IWB6 1497 aa26.28■■□□□ 1.8
RAB5C-201ENST00000346213 PCF11O94913 1555 aaKnown RBP26.28■■□□□ 1.8
RAB5C-201ENST00000346213 HECW1Q76N89 1606 aa26.27■■□□□ 1.8
RAB5C-201ENST00000346213 CLIP1P30622 1438 aa26.25■■□□□ 1.79
RAB5C-201ENST00000346213 TTC37Q6PGP7 1564 aa26.23■■□□□ 1.79
RAB5C-201ENST00000346213 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.22■■□□□ 1.79
RAB5C-201ENST00000346213 ATP1B4Q9UN42 357 aaPredicted RBP26.19■■□□□ 1.78
RAB5C-201ENST00000346213 LOC105371045A0A1W2PR82 267 aa26.17■■□□□ 1.78
RAB5C-201ENST00000346213 CASKIN1Q8WXD9 1431 aa26.17■■□□□ 1.78
RAB5C-201ENST00000346213 PLEKHD1A6NEE1 506 aa26.16■■□□□ 1.78
RAB5C-201ENST00000346213 KIF14Q15058 1648 aa26.15■■□□□ 1.78
RAB5C-201ENST00000346213 CEP162Q5TB80 1403 aa26.12■■□□□ 1.77
RAB5C-201ENST00000346213 ARAP3Q8WWN8 1544 aa26.11■■□□□ 1.77
RAB5C-201ENST00000346213 FRMPD1Q5SYB0 1578 aa26.1■■□□□ 1.77
RAB5C-201ENST00000346213 FYCO1Q9BQS8 1478 aa26.08■■□□□ 1.76
RAB5C-201ENST00000346213 TROQ12816 1431 aaPredicted RBP26.06■■□□□ 1.76
RAB5C-201ENST00000346213 NEO1Q92859 1461 aa26.06■■□□□ 1.76
RAB5C-201ENST00000346213 KDM4FA0A1W2PPD8 638 aa26.06■■□□□ 1.76
RAB5C-201ENST00000346213 RAPGEF3O95398 923 aa26.03■■□□□ 1.76
RAB5C-201ENST00000346213 FANCAO15360 1455 aa26.01■■□□□ 1.75
RAB5C-201ENST00000346213 CCDC18Q5T9S5 1454 aa26■■□□□ 1.75
RAB5C-201ENST00000346213 PLCH2O75038 1416 aa25.99■■□□□ 1.75
RAB5C-201ENST00000346213 AKNAQ7Z591 1439 aa25.98■■□□□ 1.75
RAB5C-201ENST00000346213 RICTORQ6R327 1708 aa25.94■■□□□ 1.74
RAB5C-201ENST00000346213 PHLDB1Q86UU1 1377 aa25.94■■□□□ 1.74
RAB5C-201ENST00000346213 ADGRL1O94910 1474 aa25.93■■□□□ 1.74
RAB5C-201ENST00000346213 MYO5CQ9NQX4 1742 aa25.91■■□□□ 1.74
RAB5C-201ENST00000346213 CDK11AQ9UQ88 783 aaPredicted RBP25.9■■□□□ 1.74
RAB5C-201ENST00000346213 CFAP74Q9C0B2 1584 aa25.89■■□□□ 1.74
RAB5C-201ENST00000346213 DENND4BO75064 1496 aaPredicted RBP25.89■■□□□ 1.73
RAB5C-201ENST00000346213 CDC42BPBQ9Y5S2 1711 aa25.88■■□□□ 1.73
RAB5C-201ENST00000346213 AEBP2Q6ZN18 517 aaPredicted RBP25.87■■□□□ 1.73
RAB5C-201ENST00000346213 PREX2Q70Z35 1606 aa25.84■■□□□ 1.73
RAB5C-201ENST00000346213 SCAPERQ9BY12 1400 aa25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms