RNA–Protein interactions for RNA: ENST00000346141.10

TUBD1-203, Transcript of tubulin delta 1, humanhuman

TSL 2 BASIC

Gene TUBD1, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-203ENST00000346141 FHAD1B1AJZ9 1412 aa20.81■□□□□ 0.92
TUBD1-203ENST00000346141 NUP160Q12769 1436 aa20.76■□□□□ 0.91
TUBD1-203ENST00000346141 CEP170Q5SW79 1584 aa20.72■□□□□ 0.91
TUBD1-203ENST00000346141 KIF27Q86VH2 1401 aa20.65■□□□□ 0.9
TUBD1-203ENST00000346141 SHROOM2Q13796 1616 aa20.62■□□□□ 0.89
TUBD1-203ENST00000346141 TRHP20396 242 aaPredicted RBP20.6■□□□□ 0.89
TUBD1-203ENST00000346141 ERCC6L2Q5T890 1561 aa20.59■□□□□ 0.89
TUBD1-203ENST00000346141 IGF1RP08069 1367 aa20.59■□□□□ 0.89
TUBD1-203ENST00000346141 CUL7Q14999 1698 aa20.56■□□□□ 0.88
TUBD1-203ENST00000346141 RUSC2Q8N2Y8 1516 aa20.53■□□□□ 0.88
TUBD1-203ENST00000346141 JPH4Q96JJ6 628 aa20.53■□□□□ 0.88
TUBD1-203ENST00000346141 PRG4Q92954 1404 aaPredicted RBP20.53■□□□□ 0.88
TUBD1-203ENST00000346141 KIAA0586Q9BVV6 1533 aa20.47■□□□□ 0.87
TUBD1-203ENST00000346141 CARMIL1Q5VZK9 1371 aa20.46■□□□□ 0.87
TUBD1-203ENST00000346141 RAPGEF2Q9Y4G8 1499 aa20.31■□□□□ 0.84
TUBD1-203ENST00000346141 IQGAP2Q13576 1575 aa20.29■□□□□ 0.84
TUBD1-203ENST00000346141 CARMIL2Q6F5E8 1435 aa20.28■□□□□ 0.84
TUBD1-203ENST00000346141 NPM1P06748 294 aaKnown RBP eCLIP20.27■□□□□ 0.84
TUBD1-203ENST00000346141 ADCY10Q96PN6 1610 aa20.25■□□□□ 0.83
TUBD1-203ENST00000346141 PTPRGP23470 1445 aa20.24■□□□□ 0.83
TUBD1-203ENST00000346141 TNIKQ9UKE5 1360 aa20.23■□□□□ 0.83
TUBD1-203ENST00000346141 MAPKBP1O60336 1514 aa20.22■□□□□ 0.83
TUBD1-203ENST00000346141 UGGT2Q9NYU1 1516 aa20.18■□□□□ 0.82
TUBD1-203ENST00000346141 ABCC10Q5T3U5 1492 aa20.17■□□□□ 0.82
TUBD1-203ENST00000346141 DISP1Q96F81 1524 aa20.17■□□□□ 0.82
TUBD1-203ENST00000346141 KIF13AQ9H1H9 1805 aa20.16■□□□□ 0.82
TUBD1-203ENST00000346141 TTBK1Q5TCY1 1321 aaPredicted RBP20.15■□□□□ 0.82
TUBD1-203ENST00000346141 PRXQ9BXM0 1461 aa20.14■□□□□ 0.82
TUBD1-203ENST00000346141 FAM69CQ0P6D2 419 aa20.13■□□□□ 0.81
TUBD1-203ENST00000346141 ABCC2Q92887 1545 aa20.11■□□□□ 0.81
TUBD1-203ENST00000346141 UHRF1BP1LA0JNW5 1464 aa20.11■□□□□ 0.81
TUBD1-203ENST00000346141 DIP2BQ9P265 1576 aa20.1■□□□□ 0.81
TUBD1-203ENST00000346141 UACAQ9BZF9 1416 aa20.1■□□□□ 0.81
TUBD1-203ENST00000346141 KIAA0556O60303 1618 aa20.1■□□□□ 0.81
TUBD1-203ENST00000346141 CTTNBP2Q8WZ74 1663 aa20.09■□□□□ 0.81
TUBD1-203ENST00000346141 GOLGA3Q08378 1498 aa20.05■□□□□ 0.8
TUBD1-203ENST00000346141 CSRNP3Q8WYN3 585 aa20.04■□□□□ 0.8
TUBD1-203ENST00000346141 PLB1Q6P1J6 1458 aa20.02■□□□□ 0.8
TUBD1-203ENST00000346141 EEA1Q15075 1411 aa20.02■□□□□ 0.8
TUBD1-203ENST00000346141 ASXL2Q76L83 1435 aa20.01■□□□□ 0.79
TUBD1-203ENST00000346141 KDM5BQ9UGL1 1544 aa20■□□□□ 0.79
TUBD1-203ENST00000346141 GLI2P10070 1586 aa19.94■□□□□ 0.78
TUBD1-203ENST00000346141 ZCCHC11Q5TAX3 1644 aaKnown RBP19.93■□□□□ 0.78
TUBD1-203ENST00000346141 ABCA8O94911 1581 aa19.9■□□□□ 0.78
TUBD1-203ENST00000346141 FAM9AQ8IZU1 332 aaPredicted RBP19.9■□□□□ 0.78
TUBD1-203ENST00000346141 TSPOAP1O95153 1857 aa19.9■□□□□ 0.78
TUBD1-203ENST00000346141 EPRSP07814 1512 aaKnown RBP19.89■□□□□ 0.77
TUBD1-203ENST00000346141 KDM6BO15054 1643 aa19.88■□□□□ 0.77
TUBD1-203ENST00000346141 WDR7Q9Y4E6 1490 aa19.86■□□□□ 0.77
TUBD1-203ENST00000346141 SAMD9Q5K651 1589 aa19.85■□□□□ 0.77
TUBD1-203ENST00000346141 P3H3Q8IVL6 736 aa19.82■□□□□ 0.76
TUBD1-203ENST00000346141 PPRC1Q5VV67 1664 aaKnown RBP19.82■□□□□ 0.76
TUBD1-203ENST00000346141 MAP3K4Q9Y6R4 1608 aa19.82■□□□□ 0.76
TUBD1-203ENST00000346141 KIF21BO75037 1637 aa19.81■□□□□ 0.76
TUBD1-203ENST00000346141 TEX14Q8IWB6 1497 aa19.79■□□□□ 0.76
TUBD1-203ENST00000346141 ATP10BO94823 1461 aa19.73■□□□□ 0.75
TUBD1-203ENST00000346141 KCNH8Q96L42 1107 aa19.73■□□□□ 0.75
TUBD1-203ENST00000346141 RAPGEF6Q8TEU7 1601 aa19.72■□□□□ 0.75
TUBD1-203ENST00000346141 RANGAP1P46060 587 aaPredicted RBP19.72■□□□□ 0.75
TUBD1-203ENST00000346141 EFCAB5A4FU69 1503 aa19.72■□□□□ 0.75
TUBD1-203ENST00000346141 ARID3CA6NKF2 412 aa19.71■□□□□ 0.75
TUBD1-203ENST00000346141 FHOD3Q2V2M9 1422 aa19.71■□□□□ 0.75
TUBD1-203ENST00000346141 CD109Q6YHK3 1445 aa19.71■□□□□ 0.75
TUBD1-203ENST00000346141 CFAP43Q8NDM7 1665 aa19.71■□□□□ 0.75
TUBD1-203ENST00000346141 MAGI3Q5TCQ9 1506 aa19.7■□□□□ 0.74
TUBD1-203ENST00000346141 COL17A1Q9UMD9 1497 aaPredicted RBP19.68■□□□□ 0.74
TUBD1-203ENST00000346141 PPP4R3CPQ6ZMV5 832 aa19.67■□□□□ 0.74
TUBD1-203ENST00000346141 NUP153P49790 1475 aaKnown RBP19.66■□□□□ 0.74
TUBD1-203ENST00000346141 UBTFP17480 764 aaKnown RBP19.65■□□□□ 0.74
TUBD1-203ENST00000346141 MAPK8IP2Q13387 824 aaPredicted RBP19.65■□□□□ 0.74
TUBD1-203ENST00000346141 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.63■□□□□ 0.73
TUBD1-203ENST00000346141 HNRNPUL2Q1KMD3 747 aaKnown RBP19.63■□□□□ 0.73
TUBD1-203ENST00000346141 SCAF1Q9H7N4 1312 aaKnown RBP19.63■□□□□ 0.73
TUBD1-203ENST00000346141 ABCA9Q8IUA7 1624 aa19.6■□□□□ 0.73
TUBD1-203ENST00000346141 EHMT2Q96KQ7 1210 aa19.6■□□□□ 0.73
TUBD1-203ENST00000346141 KDM4FA0A1W2PPD8 638 aa19.58■□□□□ 0.72
TUBD1-203ENST00000346141 POTEDQ86YR6 584 aa19.56■□□□□ 0.72
TUBD1-203ENST00000346141 PHLDB1Q86UU1 1377 aa19.56■□□□□ 0.72
TUBD1-203ENST00000346141 PLEKHD1A6NEE1 506 aa19.55■□□□□ 0.72
TUBD1-203ENST00000346141 FMN1Q68DA7 1419 aa19.54■□□□□ 0.72
TUBD1-203ENST00000346141 ARAP3Q8WWN8 1544 aa19.54■□□□□ 0.72
TUBD1-203ENST00000346141 ARHGAP35Q9NRY4 1499 aa19.53■□□□□ 0.72
TUBD1-203ENST00000346141 NEO1Q92859 1461 aa19.51■□□□□ 0.71
TUBD1-203ENST00000346141 ADGRL1O94910 1474 aa19.49■□□□□ 0.71
TUBD1-203ENST00000346141 HECW1Q76N89 1606 aa19.47■□□□□ 0.71
TUBD1-203ENST00000346141 CDK13Q14004 1512 aaKnown RBP19.46■□□□□ 0.71
TUBD1-203ENST00000346141 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.43■□□□□ 0.7
TUBD1-203ENST00000346141 ATP1B4Q9UN42 357 aaPredicted RBP19.43■□□□□ 0.7
TUBD1-203ENST00000346141 CDK11AQ9UQ88 783 aaPredicted RBP19.41■□□□□ 0.7
TUBD1-203ENST00000346141 RAPGEF3O95398 923 aa19.4■□□□□ 0.7
TUBD1-203ENST00000346141 TTC37Q6PGP7 1564 aa19.4■□□□□ 0.7
TUBD1-203ENST00000346141 CFAP74Q9C0B2 1584 aa19.39■□□□□ 0.69
TUBD1-203ENST00000346141 FANCAO15360 1455 aa19.39■□□□□ 0.69
TUBD1-203ENST00000346141 AKNAQ7Z591 1439 aa19.37■□□□□ 0.69
TUBD1-203ENST00000346141 DENND4BO75064 1496 aaPredicted RBP19.36■□□□□ 0.69
TUBD1-203ENST00000346141 FRMPD1Q5SYB0 1578 aa19.36■□□□□ 0.69
TUBD1-203ENST00000346141 DMRT2Q9Y5R5 561 aa19.34■□□□□ 0.69
TUBD1-203ENST00000346141 PLCH2O75038 1416 aa19.34■□□□□ 0.69
TUBD1-203ENST00000346141 TROQ12816 1431 aaPredicted RBP19.34■□□□□ 0.69
TUBD1-203ENST00000346141 CASKIN1Q8WXD9 1431 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms