RNA–Protein interactions for RNA: ENST00000345436.8

CKLF-202, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-202ENST00000345436 ERCC6L2Q5T890 1561 aa30.45■■■□□ 2.47
CKLF-202ENST00000345436 CARMIL1Q5VZK9 1371 aa30.44■■■□□ 2.46
CKLF-202ENST00000345436 KIAA0586Q9BVV6 1533 aa30.41■■■□□ 2.46
CKLF-202ENST00000345436 RUSC2Q8N2Y8 1516 aa30.36■■■□□ 2.45
CKLF-202ENST00000345436 NPM1P06748 294 aaKnown RBP eCLIP30.33■■■□□ 2.45
CKLF-202ENST00000345436 CARMIL2Q6F5E8 1435 aa30.21■■■□□ 2.43
CKLF-202ENST00000345436 RAPGEF2Q9Y4G8 1499 aa30.17■■■□□ 2.42
CKLF-202ENST00000345436 PTPRGP23470 1445 aa30.13■■■□□ 2.41
CKLF-202ENST00000345436 TNIKQ9UKE5 1360 aa30.09■■■□□ 2.41
CKLF-202ENST00000345436 IQGAP2Q13576 1575 aa30.08■■■□□ 2.41
CKLF-202ENST00000345436 TTBK1Q5TCY1 1321 aaPredicted RBP30.05■■■□□ 2.4
CKLF-202ENST00000345436 FAM69CQ0P6D2 419 aa30.02■■■□□ 2.4
CKLF-202ENST00000345436 MAPKBP1O60336 1514 aa29.97■■■□□ 2.39
CKLF-202ENST00000345436 ADCY10Q96PN6 1610 aa29.96■■■□□ 2.39
CKLF-202ENST00000345436 ABCC10Q5T3U5 1492 aa29.94■■■□□ 2.38
CKLF-202ENST00000345436 FAM9AQ8IZU1 332 aaPredicted RBP29.91■■■□□ 2.38
CKLF-202ENST00000345436 UGGT2Q9NYU1 1516 aa29.91■■■□□ 2.38
CKLF-202ENST00000345436 DISP1Q96F81 1524 aa29.88■■■□□ 2.37
CKLF-202ENST00000345436 UACAQ9BZF9 1416 aa29.87■■■□□ 2.37
CKLF-202ENST00000345436 PRXQ9BXM0 1461 aa29.87■■■□□ 2.37
CKLF-202ENST00000345436 CSRNP3Q8WYN3 585 aa29.86■■■□□ 2.37
CKLF-202ENST00000345436 ABCC2Q92887 1545 aa29.85■■■□□ 2.37
CKLF-202ENST00000345436 UHRF1BP1LA0JNW5 1464 aa29.84■■■□□ 2.37
CKLF-202ENST00000345436 GOLGA3Q08378 1498 aa29.83■■■□□ 2.37
CKLF-202ENST00000345436 KIF13AQ9H1H9 1805 aa29.82■■■□□ 2.36
CKLF-202ENST00000345436 PLB1Q6P1J6 1458 aa29.78■■■□□ 2.36
CKLF-202ENST00000345436 EEA1Q15075 1411 aa29.78■■■□□ 2.36
CKLF-202ENST00000345436 DIP2BQ9P265 1576 aa29.77■■■□□ 2.36
CKLF-202ENST00000345436 KIAA0556O60303 1618 aa29.75■■■□□ 2.35
CKLF-202ENST00000345436 CTTNBP2Q8WZ74 1663 aa29.73■■■□□ 2.35
CKLF-202ENST00000345436 AEBP2Q6ZN18 517 aaPredicted RBP29.73■■■□□ 2.35
CKLF-202ENST00000345436 ASXL2Q76L83 1435 aa29.72■■■□□ 2.35
CKLF-202ENST00000345436 KDM5BQ9UGL1 1544 aa29.66■■■□□ 2.34
CKLF-202ENST00000345436 GLI2P10070 1586 aa29.57■■■□□ 2.32
CKLF-202ENST00000345436 P3H3Q8IVL6 736 aa29.55■■■□□ 2.32
CKLF-202ENST00000345436 ZCCHC11Q5TAX3 1644 aaKnown RBP29.52■■■□□ 2.32
CKLF-202ENST00000345436 EPRSP07814 1512 aaKnown RBP29.51■■■□□ 2.32
CKLF-202ENST00000345436 TSPOAP1O95153 1857 aa29.51■■■□□ 2.31
CKLF-202ENST00000345436 KDM6BO15054 1643 aa29.5■■■□□ 2.31
CKLF-202ENST00000345436 WDR7Q9Y4E6 1490 aa29.48■■■□□ 2.31
CKLF-202ENST00000345436 ABCA8O94911 1581 aa29.47■■■□□ 2.31
CKLF-202ENST00000345436 CHIC1Q5VXU3 224 aa29.46■■■□□ 2.31
CKLF-202ENST00000345436 TEX14Q8IWB6 1497 aa29.45■■■□□ 2.31
CKLF-202ENST00000345436 KCNH8Q96L42 1107 aa29.44■■■□□ 2.3
CKLF-202ENST00000345436 RANGAP1P46060 587 aaPredicted RBP29.43■■■□□ 2.3
CKLF-202ENST00000345436 SAMD9Q5K651 1589 aa29.35■■■□□ 2.29
CKLF-202ENST00000345436 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.35■■■□□ 2.29
CKLF-202ENST00000345436 UBTFP17480 764 aaKnown RBP29.35■■■□□ 2.29
CKLF-202ENST00000345436 HNRNPUL2Q1KMD3 747 aaKnown RBP29.35■■■□□ 2.29
CKLF-202ENST00000345436 KIF21BO75037 1637 aa29.34■■■□□ 2.29
CKLF-202ENST00000345436 MAP3K4Q9Y6R4 1608 aa29.34■■■□□ 2.29
CKLF-202ENST00000345436 ARID3CA6NKF2 412 aa29.33■■■□□ 2.29
CKLF-202ENST00000345436 CD109Q6YHK3 1445 aa29.33■■■□□ 2.29
CKLF-202ENST00000345436 ATP10BO94823 1461 aa29.3■■■□□ 2.28
CKLF-202ENST00000345436 PPRC1Q5VV67 1664 aaKnown RBP29.28■■■□□ 2.28
CKLF-202ENST00000345436 MAGI3Q5TCQ9 1506 aa29.25■■■□□ 2.27
CKLF-202ENST00000345436 EFCAB5A4FU69 1503 aa29.24■■■□□ 2.27
CKLF-202ENST00000345436 RAPGEF6Q8TEU7 1601 aa29.23■■■□□ 2.27
CKLF-202ENST00000345436 FHOD3Q2V2M9 1422 aa29.23■■■□□ 2.27
CKLF-202ENST00000345436 CFAP43Q8NDM7 1665 aa29.21■■■□□ 2.27
CKLF-202ENST00000345436 EHMT2Q96KQ7 1210 aa29.21■■■□□ 2.27
CKLF-202ENST00000345436 PLEKHD1A6NEE1 506 aa29.2■■■□□ 2.26
CKLF-202ENST00000345436 COL17A1Q9UMD9 1497 aaPredicted RBP29.16■■■□□ 2.26
CKLF-202ENST00000345436 PHLDB1Q86UU1 1377 aa29.15■■■□□ 2.26
CKLF-202ENST00000345436 NUP153P49790 1475 aaKnown RBP29.12■■■□□ 2.25
CKLF-202ENST00000345436 KDM4FA0A1W2PPD8 638 aa29.11■■■□□ 2.25
CKLF-202ENST00000345436 FMN1Q68DA7 1419 aa29.07■■■□□ 2.24
CKLF-202ENST00000345436 ATP1B4Q9UN42 357 aaPredicted RBP29.05■■■□□ 2.24
CKLF-202ENST00000345436 ABCA9Q8IUA7 1624 aa29.03■■■□□ 2.24
CKLF-202ENST00000345436 CDK11AQ9UQ88 783 aaPredicted RBP29.03■■■□□ 2.24
CKLF-202ENST00000345436 ARAP3Q8WWN8 1544 aa29■■■□□ 2.23
CKLF-202ENST00000345436 NEO1Q92859 1461 aa28.97■■■□□ 2.23
CKLF-202ENST00000345436 ARHGAP35Q9NRY4 1499 aa28.94■■■□□ 2.22
CKLF-202ENST00000345436 ADGRL1O94910 1474 aa28.92■■■□□ 2.22
CKLF-202ENST00000345436 RAPGEF3O95398 923 aa28.87■■■□□ 2.21
CKLF-202ENST00000345436 HECW1Q76N89 1606 aa28.86■■■□□ 2.21
CKLF-202ENST00000345436 CDK13Q14004 1512 aaKnown RBP28.83■■■□□ 2.21
CKLF-202ENST00000345436 AKNAQ7Z591 1439 aa28.81■■■□□ 2.2
CKLF-202ENST00000345436 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.8■■■□□ 2.22e-6■■■■■ 51.7
CKLF-202ENST00000345436 FANCAO15360 1455 aa28.8■■■□□ 2.2
CKLF-202ENST00000345436 DENND4BO75064 1496 aaPredicted RBP28.78■■■□□ 2.2
CKLF-202ENST00000345436 CFAP74Q9C0B2 1584 aa28.78■■■□□ 2.2
CKLF-202ENST00000345436 CLIP1P30622 1438 aa28.77■■■□□ 2.2
CKLF-202ENST00000345436 EFCAB2Q5VUJ9 269 aa28.76■■■□□ 2.19
CKLF-202ENST00000345436 PLCH2O75038 1416 aa28.74■■■□□ 2.19
CKLF-202ENST00000345436 ARID4BQ4LE39 1312 aaPredicted RBP28.72■■■□□ 2.19
CKLF-202ENST00000345436 TROQ12816 1431 aaPredicted RBP28.71■■■□□ 2.19
CKLF-202ENST00000345436 CASKIN1Q8WXD9 1431 aa28.7■■■□□ 2.19
CKLF-202ENST00000345436 TTC37Q6PGP7 1564 aa28.69■■■□□ 2.18
CKLF-202ENST00000345436 CCDC18Q5T9S5 1454 aa28.68■■■□□ 2.18
CKLF-202ENST00000345436 KIF14Q15058 1648 aa28.64■■■□□ 2.18
CKLF-202ENST00000345436 SCAPERQ9BY12 1400 aa28.63■■■□□ 2.17
CKLF-202ENST00000345436 MAGI2Q86UL8 1455 aa28.61■■■□□ 2.17
CKLF-202ENST00000345436 FRMPD1Q5SYB0 1578 aa28.59■■■□□ 2.17
CKLF-202ENST00000345436 FYCO1Q9BQS8 1478 aa28.59■■■□□ 2.17
CKLF-202ENST00000345436 POGZQ7Z3K3 1410 aa28.57■■■□□ 2.16
CKLF-202ENST00000345436 RICTORQ6R327 1708 aa28.55■■■□□ 2.16
CKLF-202ENST00000345436 MYO5CQ9NQX4 1742 aa28.55■■■□□ 2.16
CKLF-202ENST00000345436 PCF11O94913 1555 aaKnown RBP28.54■■■□□ 2.16
CKLF-202ENST00000345436 ARHGAP5Q13017 1502 aa28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms