RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 ERCC6L2Q5T890 1561 aa34.31■■■■□ 3.08
CEACAM3-201ENST00000344550 KIAA0586Q9BVV6 1533 aa34.3■■■■□ 3.08
CEACAM3-201ENST00000344550 PRG4Q92954 1404 aaPredicted RBP34.3■■■■□ 3.08
CEACAM3-201ENST00000344550 TRHP20396 242 aaPredicted RBP34.21■■■■□ 3.07
CEACAM3-201ENST00000344550 RAPGEF2Q9Y4G8 1499 aa34.07■■■■□ 3.05
CEACAM3-201ENST00000344550 IQGAP2Q13576 1575 aa33.98■■■■□ 3.03
CEACAM3-201ENST00000344550 CARMIL2Q6F5E8 1435 aa33.97■■■■□ 3.03
CEACAM3-201ENST00000344550 NPM1P06748 294 aaKnown RBP eCLIP33.88■■■■□ 3.01
CEACAM3-201ENST00000344550 PTPRGP23470 1445 aa33.87■■■■□ 3.01
CEACAM3-201ENST00000344550 TNIKQ9UKE5 1360 aa33.86■■■■□ 3.01
CEACAM3-201ENST00000344550 PRXQ9BXM0 1461 aa33.86■■■■□ 3.01
CEACAM3-201ENST00000344550 UGGT2Q9NYU1 1516 aa33.83■■■■□ 3.01
CEACAM3-201ENST00000344550 ADCY10Q96PN6 1610 aa33.78■■■■□ 3
CEACAM3-201ENST00000344550 MAPKBP1O60336 1514 aa33.77■■■■□ 3
CEACAM3-201ENST00000344550 EEA1Q15075 1411 aa33.77■■■■□ 3
CEACAM3-201ENST00000344550 DISP1Q96F81 1524 aa33.76■■■■□ 3
CEACAM3-201ENST00000344550 CSRNP3Q8WYN3 585 aa33.72■■■□□ 2.99
CEACAM3-201ENST00000344550 CTTNBP2Q8WZ74 1663 aa33.68■■■□□ 2.98
CEACAM3-201ENST00000344550 UHRF1BP1LA0JNW5 1464 aa33.67■■■□□ 2.98
CEACAM3-201ENST00000344550 ABCC10Q5T3U5 1492 aa33.66■■■□□ 2.98
CEACAM3-201ENST00000344550 GOLGA3Q08378 1498 aa33.65■■■□□ 2.98
CEACAM3-201ENST00000344550 KIAA0556O60303 1618 aa33.63■■■□□ 2.97
CEACAM3-201ENST00000344550 ABCC2Q92887 1545 aa33.63■■■□□ 2.97
CEACAM3-201ENST00000344550 UACAQ9BZF9 1416 aa33.62■■■□□ 2.97
CEACAM3-201ENST00000344550 KIF13AQ9H1H9 1805 aa33.59■■■□□ 2.97
CEACAM3-201ENST00000344550 FAM69CQ0P6D2 419 aa33.56■■■□□ 2.96
CEACAM3-201ENST00000344550 TTBK1Q5TCY1 1321 aaPredicted RBP33.54■■■□□ 2.96
CEACAM3-201ENST00000344550 DIP2BQ9P265 1576 aa33.51■■■□□ 2.96
CEACAM3-201ENST00000344550 PLB1Q6P1J6 1458 aa33.49■■■□□ 2.95
CEACAM3-201ENST00000344550 KDM5BQ9UGL1 1544 aa33.48■■■□□ 2.95
CEACAM3-201ENST00000344550 FAM9AQ8IZU1 332 aaPredicted RBP33.45■■■□□ 2.95
CEACAM3-201ENST00000344550 CHIC1Q5VXU3 224 aa33.44■■■□□ 2.94
CEACAM3-201ENST00000344550 ASXL2Q76L83 1435 aa33.42■■■□□ 2.94
CEACAM3-201ENST00000344550 GLI2P10070 1586 aa33.34■■■□□ 2.93
CEACAM3-201ENST00000344550 KIF21BO75037 1637 aa33.33■■■□□ 2.93
CEACAM3-201ENST00000344550 ABCA8O94911 1581 aa33.33■■■□□ 2.93
CEACAM3-201ENST00000344550 ZCCHC11Q5TAX3 1644 aaKnown RBP33.29■■■□□ 2.92
CEACAM3-201ENST00000344550 SAMD9Q5K651 1589 aa33.28■■■□□ 2.92
CEACAM3-201ENST00000344550 EPRSP07814 1512 aaKnown RBP33.23■■■□□ 2.91
CEACAM3-201ENST00000344550 WDR7Q9Y4E6 1490 aa33.2■■■□□ 2.91
CEACAM3-201ENST00000344550 P3H3Q8IVL6 736 aa33.16■■■□□ 2.9
CEACAM3-201ENST00000344550 TSPOAP1O95153 1857 aa33.12■■■□□ 2.89
CEACAM3-201ENST00000344550 EFCAB5A4FU69 1503 aa33.12■■■□□ 2.89
CEACAM3-201ENST00000344550 KDM6BO15054 1643 aa33.1■■■□□ 2.89
CEACAM3-201ENST00000344550 MAP3K4Q9Y6R4 1608 aa33.1■■■□□ 2.89
CEACAM3-201ENST00000344550 TEX14Q8IWB6 1497 aa33.07■■■□□ 2.88
CEACAM3-201ENST00000344550 ATP10BO94823 1461 aa33.05■■■□□ 2.88
CEACAM3-201ENST00000344550 PPRC1Q5VV67 1664 aaKnown RBP33.04■■■□□ 2.88
CEACAM3-201ENST00000344550 RAPGEF6Q8TEU7 1601 aa33.03■■■□□ 2.88
CEACAM3-201ENST00000344550 UBTFP17480 764 aaKnown RBP33.03■■■□□ 2.88
CEACAM3-201ENST00000344550 FHOD3Q2V2M9 1422 aa32.99■■■□□ 2.87
CEACAM3-201ENST00000344550 RANGAP1P46060 587 aaPredicted RBP32.96■■■□□ 2.87
CEACAM3-201ENST00000344550 MAGI3Q5TCQ9 1506 aa32.96■■■□□ 2.87
CEACAM3-201ENST00000344550 CFAP43Q8NDM7 1665 aa32.95■■■□□ 2.87
CEACAM3-201ENST00000344550 KCNH8Q96L42 1107 aa32.95■■■□□ 2.87
CEACAM3-201ENST00000344550 CD109Q6YHK3 1445 aa32.94■■■□□ 2.86
CEACAM3-201ENST00000344550 NUP153P49790 1475 aaKnown RBP32.93■■■□□ 2.86
CEACAM3-201ENST00000344550 AEBP2Q6ZN18 517 aaPredicted RBP32.86■■■□□ 2.85
CEACAM3-201ENST00000344550 ARID3CA6NKF2 412 aa32.84■■■□□ 2.85
CEACAM3-201ENST00000344550 FMN1Q68DA7 1419 aa32.84■■■□□ 2.85
CEACAM3-201ENST00000344550 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.83■■■□□ 2.85
CEACAM3-201ENST00000344550 HNRNPUL2Q1KMD3 747 aaKnown RBP32.83■■■□□ 2.85
CEACAM3-201ENST00000344550 PHLDB1Q86UU1 1377 aa32.81■■■□□ 2.84
CEACAM3-201ENST00000344550 COL17A1Q9UMD9 1497 aaPredicted RBP32.8■■■□□ 2.84
CEACAM3-201ENST00000344550 ABCA9Q8IUA7 1624 aa32.8■■■□□ 2.84
CEACAM3-201ENST00000344550 ARHGAP35Q9NRY4 1499 aa32.8■■■□□ 2.84
CEACAM3-201ENST00000344550 PLEKHD1A6NEE1 506 aa32.79■■■□□ 2.84
CEACAM3-201ENST00000344550 EHMT2Q96KQ7 1210 aa32.76■■■□□ 2.83
CEACAM3-201ENST00000344550 ARAP3Q8WWN8 1544 aa32.69■■■□□ 2.82
CEACAM3-201ENST00000344550 NEO1Q92859 1461 aa32.65■■■□□ 2.82
CEACAM3-201ENST00000344550 HECW1Q76N89 1606 aa32.64■■■□□ 2.82
CEACAM3-201ENST00000344550 CDK11AQ9UQ88 783 aaPredicted RBP32.62■■■□□ 2.81
CEACAM3-201ENST00000344550 CDK13Q14004 1512 aaKnown RBP32.56■■■□□ 2.8
CEACAM3-201ENST00000344550 KDM4FA0A1W2PPD8 638 aa32.55■■■□□ 2.8
CEACAM3-201ENST00000344550 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.52■■■□□ 2.8
CEACAM3-201ENST00000344550 ATP1B4Q9UN42 357 aaPredicted RBP32.52■■■□□ 2.8
CEACAM3-201ENST00000344550 CASKIN1Q8WXD9 1431 aa32.5■■■□□ 2.79
CEACAM3-201ENST00000344550 CLIP1P30622 1438 aa32.47■■■□□ 2.79
CEACAM3-201ENST00000344550 CFAP74Q9C0B2 1584 aa32.46■■■□□ 2.79
CEACAM3-201ENST00000344550 CCDC18Q5T9S5 1454 aa32.44■■■□□ 2.78
CEACAM3-201ENST00000344550 FANCAO15360 1455 aa32.43■■■□□ 2.78
CEACAM3-201ENST00000344550 TROQ12816 1431 aaPredicted RBP32.43■■■□□ 2.78
CEACAM3-201ENST00000344550 TTC37Q6PGP7 1564 aa32.41■■■□□ 2.78
CEACAM3-201ENST00000344550 PLCH2O75038 1416 aa32.41■■■□□ 2.78
CEACAM3-201ENST00000344550 AKNAQ7Z591 1439 aa32.41■■■□□ 2.78
CEACAM3-201ENST00000344550 ADGRL1O94910 1474 aa32.4■■■□□ 2.78
CEACAM3-201ENST00000344550 FYCO1Q9BQS8 1478 aa32.39■■■□□ 2.78
CEACAM3-201ENST00000344550 RAPGEF3O95398 923 aa32.37■■■□□ 2.77
CEACAM3-201ENST00000344550 DENND4BO75064 1496 aaPredicted RBP32.36■■■□□ 2.77
CEACAM3-201ENST00000344550 PCF11O94913 1555 aaKnown RBP32.35■■■□□ 2.77
CEACAM3-201ENST00000344550 KIF14Q15058 1648 aa32.34■■■□□ 2.77
CEACAM3-201ENST00000344550 EFCAB2Q5VUJ9 269 aa32.32■■■□□ 2.76
CEACAM3-201ENST00000344550 LRRIQ1Q96JM4 1722 aa32.3■■■□□ 2.76
CEACAM3-201ENST00000344550 FRMPD1Q5SYB0 1578 aa32.29■■■□□ 2.76
CEACAM3-201ENST00000344550 MYO5CQ9NQX4 1742 aa32.26■■■□□ 2.76
CEACAM3-201ENST00000344550 RICTORQ6R327 1708 aa32.25■■■□□ 2.75
CEACAM3-201ENST00000344550 MAGI2Q86UL8 1455 aa32.24■■■□□ 2.75
CEACAM3-201ENST00000344550 ZMYM4Q5VZL5 1548 aa32.23■■■□□ 2.75
CEACAM3-201ENST00000344550 SCAPERQ9BY12 1400 aa32.2■■■□□ 2.75
CEACAM3-201ENST00000344550 CEP162Q5TB80 1403 aa32.19■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms