RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 SENP3-EIF4A1A0A087X0R7 540 aa14.82□□□□□ -0.04
RPL28-201ENST00000344063 CHIC2Q9UKJ5 165 aa14.81□□□□□ -0.04
RPL28-201ENST00000344063 ZNF777Q9ULD5 760 aaPredicted RBP14.8□□□□□ -0.04
RPL28-201ENST00000344063 CCDC136Q96JN2 1154 aa14.8□□□□□ -0.04
RPL28-201ENST00000344063 SALL2Q9Y467 1007 aaPredicted RBP14.79□□□□□ -0.04
RPL28-201ENST00000344063 SMARCA2P51531 1590 aa14.77□□□□□ -0.05
RPL28-201ENST00000344063 FHAD1B1AJZ9 1412 aa14.76□□□□□ -0.05
RPL28-201ENST00000344063 EIF4G2P78344 907 aaKnown RBP eCLIP14.76□□□□□ -0.05
RPL28-201ENST00000344063 TIMELESSQ9UNS1 1208 aa14.76□□□□□ -0.05
RPL28-201ENST00000344063 SLC4A1APQ9BWU0 796 aaKnown RBP14.75□□□□□ -0.05
RPL28-201ENST00000344063 SMARCA4P51532 1647 aa14.75□□□□□ -0.05
RPL28-201ENST00000344063 MRS2Q9HD23 443 aa14.73□□□□□ -0.05
RPL28-201ENST00000344063 DEKP35659 375 aaKnown RBP14.72□□□□□ -0.05
RPL28-201ENST00000344063 CARMIL1Q5VZK9 1371 aa14.71□□□□□ -0.05
RPL28-201ENST00000344063 SIN3AQ96ST3 1273 aa14.71□□□□□ -0.06
RPL28-201ENST00000344063 KANK4Q5T7N3 995 aaPredicted RBP14.7□□□□□ -0.06
RPL28-201ENST00000344063 RRP7BPQ9NSQ0 103 aa14.7□□□□□ -0.06
RPL28-201ENST00000344063 ARXQ96QS3 562 aa14.7□□□□□ -0.06
RPL28-201ENST00000344063 CUX2O14529 1486 aa14.7□□□□□ -0.06
RPL28-201ENST00000344063 KCNH8Q96L42 1107 aa14.68□□□□□ -0.06
RPL28-201ENST00000344063 B4GALNT3Q6L9W6 998 aa14.68□□□□□ -0.06
RPL28-201ENST00000344063 SETD5Q9C0A6 1442 aa14.68□□□□□ -0.06
RPL28-201ENST00000344063 RUSC2Q8N2Y8 1516 aa14.67□□□□□ -0.06
RPL28-201ENST00000344063 TMC1Q8TDI8 760 aa14.66□□□□□ -0.06
RPL28-201ENST00000344063 RAPGEF2Q9Y4G8 1499 aa14.65□□□□□ -0.06
RPL28-201ENST00000344063 LAS1LQ9Y4W2 734 aaKnown RBP14.64□□□□□ -0.07
RPL28-201ENST00000344063 NOP58Q9Y2X3 529 aaKnown RBP14.62□□□□□ -0.07
RPL28-201ENST00000344063 TSPY4P0CV99 314 aa14.62□□□□□ -0.07
RPL28-201ENST00000344063 TSPY10P0CW01 314 aa14.62□□□□□ -0.07
RPL28-201ENST00000344063 ATAD2BQ9ULI0 1458 aa14.61□□□□□ -0.07
RPL28-201ENST00000344063 CCER2I3L3R5 266 aa14.61□□□□□ -0.07
RPL28-201ENST00000344063 RAB3GAP2Q9H2M9 1393 aa14.61□□□□□ -0.07
RPL28-201ENST00000344063 ARHGAP35Q9NRY4 1499 aa14.58□□□□□ -0.08
RPL28-201ENST00000344063 CANXP27824 592 aaKnown RBP14.57□□□□□ -0.08
RPL28-201ENST00000344063 PPP4R2Q9NY27 417 aa14.57□□□□□ -0.08
RPL28-201ENST00000344063 DHX57Q6P158 1386 aaKnown RBP14.57□□□□□ -0.08
RPL28-201ENST00000344063 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.55□□□□□ -0.08
RPL28-201ENST00000344063 NEFMP07197 916 aa14.54□□□□□ -0.08
RPL28-201ENST00000344063 KDM2AQ9Y2K7 1162 aa14.53□□□□□ -0.08
RPL28-201ENST00000344063 CHMP7Q8WUX9 453 aaPredicted RBP14.53□□□□□ -0.08
RPL28-201ENST00000344063 CFDP1Q9UEE9 299 aaPredicted RBP14.5□□□□□ -0.09
RPL28-201ENST00000344063 FMN1Q68DA7 1419 aa14.5□□□□□ -0.09
RPL28-201ENST00000344063 PPP1R15AO75807 674 aaPredicted RBP14.49□□□□□ -0.09
RPL28-201ENST00000344063 PLEKHD1A6NEE1 506 aa14.48□□□□□ -0.09
RPL28-201ENST00000344063 GLIPR1L2Q4G1C9 344 aa14.47□□□□□ -0.09
RPL28-201ENST00000344063 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.47□□□□□ -0.09
RPL28-201ENST00000344063 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.47□□□□□ -0.09
RPL28-201ENST00000344063 WDR43Q15061 677 aaKnown RBP eCLIP14.44□□□□□ -0.1
RPL28-201ENST00000344063 KIF21BO75037 1637 aa14.44□□□□□ -0.1
RPL28-201ENST00000344063 CADPSQ9ULU8 1353 aa14.44□□□□□ -0.1
RPL28-201ENST00000344063 HSPA5P11021 654 aaKnown RBP14.42□□□□□ -0.1
RPL28-201ENST00000344063 CARD11Q9BXL7 1154 aa14.42□□□□□ -0.1
RPL28-201ENST00000344063 ERICH6BQ5W0A0 696 aa14.4□□□□□ -0.1
RPL28-201ENST00000344063 EIF4G1Q04637 1599 aaKnown RBP14.39□□□□□ -0.11
RPL28-201ENST00000344063 FHOD3Q2V2M9 1422 aa14.39□□□□□ -0.11
RPL28-201ENST00000344063 NPM1P06748 294 aaKnown RBP eCLIP14.38□□□□□ -0.11
RPL28-201ENST00000344063 PPM1GO15355 546 aaPredicted RBP14.37□□□□□ -0.11
RPL28-201ENST00000344063 UPF2Q9HAU5 1272 aaKnown RBP14.37□□□□□ -0.11
RPL28-201ENST00000344063 CHGAP10645 457 aaKnown RBP14.35□□□□□ -0.11
RPL28-201ENST00000344063 RGL3Q3MIN7 710 aa14.34□□□□□ -0.11
RPL28-201ENST00000344063 DDRGK1Q96HY6 314 aa14.34□□□□□ -0.11
RPL28-201ENST00000344063 MPHOSPH9Q99550 1183 aa14.34□□□□□ -0.11
RPL28-201ENST00000344063 ERICH3Q5RHP9 1530 aa14.33□□□□□ -0.11
RPL28-201ENST00000344063 TDRD9Q8NDG6 1382 aaKnown RBP14.33□□□□□ -0.11
RPL28-201ENST00000344063 HSP90AA1P07900 732 aaKnown RBP14.33□□□□□ -0.12
RPL28-201ENST00000344063 SYNJ1O43426 1573 aa14.32□□□□□ -0.12
RPL28-201ENST00000344063 CDCA8Q53HL2 280 aa14.32□□□□□ -0.12
RPL28-201ENST00000344063 PDS5BQ9NTI5 1447 aa14.32□□□□□ -0.12
RPL28-201ENST00000344063 IGF1RP08069 1367 aa14.31□□□□□ -0.12
RPL28-201ENST00000344063 RGS3P49796 1198 aa14.3□□□□□ -0.12
RPL28-201ENST00000344063 ESF1Q9H501 851 aaKnown RBP14.29□□□□□ -0.12
RPL28-201ENST00000344063 NAP1L5Q96NT1 182 aaPredicted RBP14.29□□□□□ -0.12
RPL28-201ENST00000344063 ANP32BQ92688 251 aaKnown RBP14.28□□□□□ -0.12
RPL28-201ENST00000344063 RRBP1Q9P2E9 1410 aaKnown RBP14.28□□□□□ -0.12
RPL28-201ENST00000344063 KNSTRNQ9Y448 316 aa14.28□□□□□ -0.12
RPL28-201ENST00000344063 NCAPD3P42695 1498 aa14.27□□□□□ -0.13
RPL28-201ENST00000344063 L3MBTL2Q969R5 705 aa14.27□□□□□ -0.13
RPL28-201ENST00000344063 FOXD1Q16676 465 aa14.26□□□□□ -0.13
RPL28-201ENST00000344063 IPO9Q96P70 1041 aaKnown RBP14.26□□□□□ -0.13
RPL28-201ENST00000344063 ARAP1Q96P48 1450 aa14.25□□□□□ -0.13
RPL28-201ENST00000344063 PKD2Q13563 968 aa14.25□□□□□ -0.13
RPL28-201ENST00000344063 PRXQ9BXM0 1461 aa14.25□□□□□ -0.13
RPL28-201ENST00000344063 FANCIQ9NVI1 1328 aa14.25□□□□□ -0.13
RPL28-201ENST00000344063 CCDC18Q5T9S5 1454 aa14.25□□□□□ -0.13
RPL28-201ENST00000344063 DCAF11Q8TEB1 546 aa14.25□□□□□ -0.13
RPL28-201ENST00000344063 ANO8Q9HCE9 1232 aaPredicted RBP14.24□□□□□ -0.13
RPL28-201ENST00000344063 FANCD2Q9BXW9 1451 aa14.24□□□□□ -0.13
RPL28-201ENST00000344063 FGD5Q6ZNL6 1462 aa14.23□□□□□ -0.13
RPL28-201ENST00000344063 LRRC9Q6ZRR7 1453 aa14.23□□□□□ -0.13
RPL28-201ENST00000344063 ARID4BQ4LE39 1312 aaPredicted RBP14.22□□□□□ -0.13
RPL28-201ENST00000344063 PHLDB1Q86UU1 1377 aa14.21□□□□□ -0.13
RPL28-201ENST00000344063 TOP2BQ02880 1626 aa14.21□□□□□ -0.13
RPL28-201ENST00000344063 ANKRD30AQ9BXX3 1397 aa14.2□□□□□ -0.14
RPL28-201ENST00000344063 TMF1P82094 1093 aa14.2□□□□□ -0.14
RPL28-201ENST00000344063 FGD6Q6ZV73 1430 aa14.19□□□□□ -0.14
RPL28-201ENST00000344063 BECN1Q14457 450 aa14.19□□□□□ -0.14
RPL28-201ENST00000344063 CARMIL2Q6F5E8 1435 aa14.18□□□□□ -0.14
RPL28-201ENST00000344063 TRIM44Q96DX7 344 aaPredicted RBP14.18□□□□□ -0.14
RPL28-201ENST00000344063 RALBP1Q15311 655 aa14.18□□□□□ -0.14
RPL28-201ENST00000344063 SLC24A1O60721 1099 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms