RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 RUSC2Q8N2Y8 1516 aa30.91■■■□□ 2.54
USF2-202ENST00000343550 CUL7Q14999 1698 aa30.83■■■□□ 2.53
USF2-202ENST00000343550 KIAA0586Q9BVV6 1533 aa30.83■■■□□ 2.53
USF2-202ENST00000343550 CARMIL1Q5VZK9 1371 aa30.77■■■□□ 2.52
USF2-202ENST00000343550 NPM1P06748 294 aaKnown RBP eCLIP30.7■■■□□ 2.51
USF2-202ENST00000343550 ADCY10Q96PN6 1610 aa30.6■■■□□ 2.49
USF2-202ENST00000343550 KIF13AQ9H1H9 1805 aa30.59■■■□□ 2.49
USF2-202ENST00000343550 FAM69CQ0P6D2 419 aa30.57■■■□□ 2.49
USF2-202ENST00000343550 MAPKBP1O60336 1514 aa30.56■■■□□ 2.48
USF2-202ENST00000343550 PTPRGP23470 1445 aa30.56■■■□□ 2.48
USF2-202ENST00000343550 ABCC10Q5T3U5 1492 aa30.56■■■□□ 2.48
USF2-202ENST00000343550 CARMIL2Q6F5E8 1435 aa30.53■■■□□ 2.48
USF2-202ENST00000343550 TTBK1Q5TCY1 1321 aaPredicted RBP30.51■■■□□ 2.47
USF2-202ENST00000343550 TNIKQ9UKE5 1360 aa30.5■■■□□ 2.47
USF2-202ENST00000343550 IQGAP2Q13576 1575 aa30.5■■■□□ 2.47
USF2-202ENST00000343550 RAPGEF2Q9Y4G8 1499 aa30.48■■■□□ 2.47
USF2-202ENST00000343550 AEBP2Q6ZN18 517 aaPredicted RBP30.46■■■□□ 2.47
USF2-202ENST00000343550 DIP2BQ9P265 1576 aa30.43■■■□□ 2.46
USF2-202ENST00000343550 DISP1Q96F81 1524 aa30.38■■■□□ 2.45
USF2-202ENST00000343550 ABCC2Q92887 1545 aa30.35■■■□□ 2.45
USF2-202ENST00000343550 UGGT2Q9NYU1 1516 aa30.33■■■□□ 2.45
USF2-202ENST00000343550 CHIC1Q5VXU3 224 aa30.32■■■□□ 2.44
USF2-202ENST00000343550 UACAQ9BZF9 1416 aa30.31■■■□□ 2.44
USF2-202ENST00000343550 UHRF1BP1LA0JNW5 1464 aa30.3■■■□□ 2.44
USF2-202ENST00000343550 ASXL2Q76L83 1435 aa30.25■■■□□ 2.43
USF2-202ENST00000343550 PLB1Q6P1J6 1458 aa30.24■■■□□ 2.43
USF2-202ENST00000343550 KIAA0556O60303 1618 aa30.21■■■□□ 2.43
USF2-202ENST00000343550 TSPOAP1O95153 1857 aa30.19■■■□□ 2.42
USF2-202ENST00000343550 PRXQ9BXM0 1461 aa30.18■■■□□ 2.42
USF2-202ENST00000343550 KDM5BQ9UGL1 1544 aa30.16■■■□□ 2.42
USF2-202ENST00000343550 KDM6BO15054 1643 aa30.16■■■□□ 2.42
USF2-202ENST00000343550 CTTNBP2Q8WZ74 1663 aa30.13■■■□□ 2.41
USF2-202ENST00000343550 GLI2P10070 1586 aa30.13■■■□□ 2.41
USF2-202ENST00000343550 CSRNP3Q8WYN3 585 aa30.12■■■□□ 2.41
USF2-202ENST00000343550 GOLGA3Q08378 1498 aa30.11■■■□□ 2.41
USF2-202ENST00000343550 ZCCHC11Q5TAX3 1644 aaKnown RBP30.06■■■□□ 2.4
USF2-202ENST00000343550 EPRSP07814 1512 aaKnown RBP30.06■■■□□ 2.4
USF2-202ENST00000343550 EEA1Q15075 1411 aa30.05■■■□□ 2.4
USF2-202ENST00000343550 FAM9AQ8IZU1 332 aaPredicted RBP30.01■■■□□ 2.4
USF2-202ENST00000343550 PPRC1Q5VV67 1664 aaKnown RBP30■■■□□ 2.39
USF2-202ENST00000343550 WDR7Q9Y4E6 1490 aa29.96■■■□□ 2.39
USF2-202ENST00000343550 ABCA8O94911 1581 aa29.95■■■□□ 2.38
USF2-202ENST00000343550 MAP3K4Q9Y6R4 1608 aa29.94■■■□□ 2.38
USF2-202ENST00000343550 KDM4FA0A1W2PPD8 638 aa29.91■■■□□ 2.38
USF2-202ENST00000343550 TEX14Q8IWB6 1497 aa29.9■■■□□ 2.38
USF2-202ENST00000343550 P3H3Q8IVL6 736 aa29.9■■■□□ 2.38
USF2-202ENST00000343550 COL17A1Q9UMD9 1497 aaPredicted RBP29.88■■■□□ 2.37
USF2-202ENST00000343550 KCNH8Q96L42 1107 aa29.87■■■□□ 2.37
USF2-202ENST00000343550 CD109Q6YHK3 1445 aa29.8■■■□□ 2.36
USF2-202ENST00000343550 ARID3CA6NKF2 412 aa29.78■■■□□ 2.36
USF2-202ENST00000343550 ATP10BO94823 1461 aa29.75■■■□□ 2.35
USF2-202ENST00000343550 SAMD9Q5K651 1589 aa29.75■■■□□ 2.35
USF2-202ENST00000343550 MAGI3Q5TCQ9 1506 aa29.74■■■□□ 2.35
USF2-202ENST00000343550 CFAP43Q8NDM7 1665 aa29.72■■■□□ 2.35
USF2-202ENST00000343550 KIF21BO75037 1637 aa29.71■■■□□ 2.35
USF2-202ENST00000343550 RANGAP1P46060 587 aaPredicted RBP29.71■■■□□ 2.35
USF2-202ENST00000343550 ADGRL1O94910 1474 aa29.64■■■□□ 2.34
USF2-202ENST00000343550 RAPGEF6Q8TEU7 1601 aa29.62■■■□□ 2.33
USF2-202ENST00000343550 EHMT2Q96KQ7 1210 aa29.62■■■□□ 2.33
USF2-202ENST00000343550 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.61■■■□□ 2.33
USF2-202ENST00000343550 HNRNPUL2Q1KMD3 747 aaKnown RBP29.61■■■□□ 2.33
USF2-202ENST00000343550 FHOD3Q2V2M9 1422 aa29.59■■■□□ 2.33
USF2-202ENST00000343550 UBTFP17480 764 aaKnown RBP29.57■■■□□ 2.32
USF2-202ENST00000343550 NUP153P49790 1475 aaKnown RBP29.55■■■□□ 2.32
USF2-202ENST00000343550 ABCA9Q8IUA7 1624 aa29.53■■■□□ 2.32
USF2-202ENST00000343550 ARAP3Q8WWN8 1544 aa29.51■■■□□ 2.31
USF2-202ENST00000343550 PHLDB1Q86UU1 1377 aa29.49■■■□□ 2.31
USF2-202ENST00000343550 EFCAB5A4FU69 1503 aa29.48■■■□□ 2.31
USF2-202ENST00000343550 PLEKHD1A6NEE1 506 aa29.46■■■□□ 2.31
USF2-202ENST00000343550 NEO1Q92859 1461 aa29.4■■■□□ 2.3
USF2-202ENST00000343550 RAPGEF3O95398 923 aa29.39■■■□□ 2.3
USF2-202ENST00000343550 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.27■■■□□ 2.282e-6■□□□□ 9.6
USF2-202ENST00000343550 CDK13Q14004 1512 aaKnown RBP29.26■■■□□ 2.27
USF2-202ENST00000343550 FMN1Q68DA7 1419 aa29.26■■■□□ 2.27
USF2-202ENST00000343550 ARHGAP35Q9NRY4 1499 aa29.25■■■□□ 2.27
USF2-202ENST00000343550 ATP1B4Q9UN42 357 aaPredicted RBP29.25■■■□□ 2.27
USF2-202ENST00000343550 AKNAQ7Z591 1439 aa29.23■■■□□ 2.27
USF2-202ENST00000343550 FANCAO15360 1455 aa29.23■■■□□ 2.27
USF2-202ENST00000343550 FRMPD1Q5SYB0 1578 aa29.22■■■□□ 2.27
USF2-202ENST00000343550 DENND4BO75064 1496 aaPredicted RBP29.2■■■□□ 2.27
USF2-202ENST00000343550 TTC37Q6PGP7 1564 aa29.19■■■□□ 2.26
USF2-202ENST00000343550 HECW2Q9P2P5 1572 aa29.18■■■□□ 2.26
USF2-202ENST00000343550 CDK11AQ9UQ88 783 aaPredicted RBP29.15■■■□□ 2.26
USF2-202ENST00000343550 HECW1Q76N89 1606 aa29.15■■■□□ 2.26
USF2-202ENST00000343550 CFAP74Q9C0B2 1584 aa29.15■■■□□ 2.26
USF2-202ENST00000343550 ARID4BQ4LE39 1312 aaPredicted RBP29.15■■■□□ 2.26
USF2-202ENST00000343550 PLCH2O75038 1416 aa29.12■■■□□ 2.25
USF2-202ENST00000343550 LOC105371045A0A1W2PR82 267 aa29.12■■■□□ 2.25
USF2-202ENST00000343550 RICTORQ6R327 1708 aa29.11■■■□□ 2.25
USF2-202ENST00000343550 ADAMTSL3P82987 1691 aa29.1■■■□□ 2.25
USF2-202ENST00000343550 PTPRMP28827 1452 aa29.07■■■□□ 2.24
USF2-202ENST00000343550 ARHGEF40Q8TER5 1519 aa29.06■■■□□ 2.24
USF2-202ENST00000343550 CLIP1P30622 1438 aa29.05■■■□□ 2.24
USF2-202ENST00000343550 SCAPERQ9BY12 1400 aa29.04■■■□□ 2.24
USF2-202ENST00000343550 BCORL1Q5H9F3 1711 aa29.04■■■□□ 2.24
USF2-202ENST00000343550 EFCAB2Q5VUJ9 269 aa29.04■■■□□ 2.24
USF2-202ENST00000343550 ZMYM4Q5VZL5 1548 aa29.03■■■□□ 2.24
USF2-202ENST00000343550 TROQ12816 1431 aaPredicted RBP29.02■■■□□ 2.24
USF2-202ENST00000343550 MAGI2Q86UL8 1455 aa29■■■□□ 2.23
USF2-202ENST00000343550 YEATS2Q9ULM3 1422 aa28.99■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms