RNA–Protein interactions for RNA: ENST00000341627.5

TNFRSF12A-202, Transcript of TNF receptor superfamily member 12A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF12A, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-202ENST00000341627 SHROOM2Q13796 1616 aa25.91■■□□□ 1.74
TNFRSF12A-202ENST00000341627 RUSC2Q8N2Y8 1516 aa25.9■■□□□ 1.74
TNFRSF12A-202ENST00000341627 PRG4Q92954 1404 aaPredicted RBP25.87■■□□□ 1.73
TNFRSF12A-202ENST00000341627 KIAA0586Q9BVV6 1533 aa25.83■■□□□ 1.72
TNFRSF12A-202ENST00000341627 EEA1Q15075 1411 aa25.77■■□□□ 1.72
TNFRSF12A-202ENST00000341627 RAPGEF2Q9Y4G8 1499 aa25.75■■□□□ 1.71
TNFRSF12A-202ENST00000341627 TRHP20396 242 aaPredicted RBP25.75■■□□□ 1.71
TNFRSF12A-202ENST00000341627 CSRNP3Q8WYN3 585 aa25.71■■□□□ 1.71
TNFRSF12A-202ENST00000341627 PRXQ9BXM0 1461 aa25.67■■□□□ 1.7
TNFRSF12A-202ENST00000341627 FAM9AQ8IZU1 332 aaPredicted RBP25.63■■□□□ 1.69
TNFRSF12A-202ENST00000341627 IQGAP2Q13576 1575 aa25.56■■□□□ 1.68
TNFRSF12A-202ENST00000341627 CARMIL2Q6F5E8 1435 aa25.54■■□□□ 1.68
TNFRSF12A-202ENST00000341627 PTPRGP23470 1445 aa25.53■■□□□ 1.68
TNFRSF12A-202ENST00000341627 TNIKQ9UKE5 1360 aa25.51■■□□□ 1.67
TNFRSF12A-202ENST00000341627 DISP1Q96F81 1524 aa25.5■■□□□ 1.67
TNFRSF12A-202ENST00000341627 UGGT2Q9NYU1 1516 aa25.47■■□□□ 1.67
TNFRSF12A-202ENST00000341627 CTTNBP2Q8WZ74 1663 aa25.46■■□□□ 1.67
TNFRSF12A-202ENST00000341627 TTBK1Q5TCY1 1321 aaPredicted RBP25.46■■□□□ 1.67
TNFRSF12A-202ENST00000341627 NPM1P06748 294 aaKnown RBP eCLIP25.45■■□□□ 1.66
TNFRSF12A-202ENST00000341627 KIF21BO75037 1637 aa25.44■■□□□ 1.66
TNFRSF12A-202ENST00000341627 ADCY10Q96PN6 1610 aa25.44■■□□□ 1.66
TNFRSF12A-202ENST00000341627 MAPKBP1O60336 1514 aa25.35■■□□□ 1.65
TNFRSF12A-202ENST00000341627 KIAA0556O60303 1618 aa25.34■■□□□ 1.65
TNFRSF12A-202ENST00000341627 UACAQ9BZF9 1416 aa25.33■■□□□ 1.65
TNFRSF12A-202ENST00000341627 GOLGA3Q08378 1498 aa25.33■■□□□ 1.65
TNFRSF12A-202ENST00000341627 UHRF1BP1LA0JNW5 1464 aa25.32■■□□□ 1.64
TNFRSF12A-202ENST00000341627 ABCC10Q5T3U5 1492 aa25.31■■□□□ 1.64
TNFRSF12A-202ENST00000341627 ABCC2Q92887 1545 aa25.31■■□□□ 1.64
TNFRSF12A-202ENST00000341627 FAM69CQ0P6D2 419 aa25.3■■□□□ 1.64
TNFRSF12A-202ENST00000341627 UBTFP17480 764 aaKnown RBP25.28■■□□□ 1.64
TNFRSF12A-202ENST00000341627 EHMT2Q96KQ7 1210 aa25.27■■□□□ 1.64
TNFRSF12A-202ENST00000341627 KIF13AQ9H1H9 1805 aa25.21■■□□□ 1.63
TNFRSF12A-202ENST00000341627 KDM5BQ9UGL1 1544 aa25.2■■□□□ 1.62
TNFRSF12A-202ENST00000341627 PLB1Q6P1J6 1458 aa25.2■■□□□ 1.62
TNFRSF12A-202ENST00000341627 DIP2BQ9P265 1576 aa25.19■■□□□ 1.62
TNFRSF12A-202ENST00000341627 ASXL2Q76L83 1435 aa25.19■■□□□ 1.62
TNFRSF12A-202ENST00000341627 P3H3Q8IVL6 736 aa25.18■■□□□ 1.62
TNFRSF12A-202ENST00000341627 RANGAP1P46060 587 aaPredicted RBP25.17■■□□□ 1.62
TNFRSF12A-202ENST00000341627 SAMD9Q5K651 1589 aa25.14■■□□□ 1.62
TNFRSF12A-202ENST00000341627 ABCA8O94911 1581 aa25.11■■□□□ 1.61
TNFRSF12A-202ENST00000341627 EFCAB5A4FU69 1503 aa25.1■■□□□ 1.61
TNFRSF12A-202ENST00000341627 ZCCHC11Q5TAX3 1644 aaKnown RBP25.05■■□□□ 1.6
TNFRSF12A-202ENST00000341627 EPRSP07814 1512 aaKnown RBP25.03■■□□□ 1.6
TNFRSF12A-202ENST00000341627 GLI2P10070 1586 aa25.03■■□□□ 1.6
TNFRSF12A-202ENST00000341627 FHOD3Q2V2M9 1422 aa25.02■■□□□ 1.6
TNFRSF12A-202ENST00000341627 WDR7Q9Y4E6 1490 aa24.99■■□□□ 1.59
TNFRSF12A-202ENST00000341627 ARID3CA6NKF2 412 aa24.97■■□□□ 1.59
TNFRSF12A-202ENST00000341627 ATP10BO94823 1461 aa24.96■■□□□ 1.59
TNFRSF12A-202ENST00000341627 ARHGAP35Q9NRY4 1499 aa24.96■■□□□ 1.59
TNFRSF12A-202ENST00000341627 KCNH8Q96L42 1107 aa24.92■■□□□ 1.58
TNFRSF12A-202ENST00000341627 RAPGEF6Q8TEU7 1601 aa24.9■■□□□ 1.58
TNFRSF12A-202ENST00000341627 TSPOAP1O95153 1857 aa24.89■■□□□ 1.57
TNFRSF12A-202ENST00000341627 FMN1Q68DA7 1419 aa24.88■■□□□ 1.57
TNFRSF12A-202ENST00000341627 NUP153P49790 1475 aaKnown RBP24.88■■□□□ 1.57
TNFRSF12A-202ENST00000341627 CLIP1P30622 1438 aa24.87■■□□□ 1.57
TNFRSF12A-202ENST00000341627 PPRC1Q5VV67 1664 aaKnown RBP24.86■■□□□ 1.57
TNFRSF12A-202ENST00000341627 MAP3K4Q9Y6R4 1608 aa24.86■■□□□ 1.57
TNFRSF12A-202ENST00000341627 LOC105371045A0A1W2PR82 267 aa24.84■■□□□ 1.57
TNFRSF12A-202ENST00000341627 KDM6BO15054 1643 aa24.83■■□□□ 1.56
TNFRSF12A-202ENST00000341627 CD109Q6YHK3 1445 aa24.82■■□□□ 1.56
TNFRSF12A-202ENST00000341627 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.81■■□□□ 1.56
TNFRSF12A-202ENST00000341627 HNRNPUL2Q1KMD3 747 aaKnown RBP24.81■■□□□ 1.56
TNFRSF12A-202ENST00000341627 COL17A1Q9UMD9 1497 aaPredicted RBP24.8■■□□□ 1.56
TNFRSF12A-202ENST00000341627 TEX14Q8IWB6 1497 aa24.79■■□□□ 1.56
TNFRSF12A-202ENST00000341627 CEP162Q5TB80 1403 aa24.78■■□□□ 1.56
TNFRSF12A-202ENST00000341627 MAGI3Q5TCQ9 1506 aa24.76■■□□□ 1.55
TNFRSF12A-202ENST00000341627 ATP1B4Q9UN42 357 aaPredicted RBP24.74■■□□□ 1.55
TNFRSF12A-202ENST00000341627 HECW1Q76N89 1606 aa24.72■■□□□ 1.55
TNFRSF12A-202ENST00000341627 PLEKHD1A6NEE1 506 aa24.72■■□□□ 1.55
TNFRSF12A-202ENST00000341627 CFAP43Q8NDM7 1665 aa24.7■■□□□ 1.54
TNFRSF12A-202ENST00000341627 CASKIN1Q8WXD9 1431 aa24.68■■□□□ 1.54
TNFRSF12A-202ENST00000341627 ABCA9Q8IUA7 1624 aa24.65■■□□□ 1.54
TNFRSF12A-202ENST00000341627 CDK13Q14004 1512 aaKnown RBP24.64■■□□□ 1.53
TNFRSF12A-202ENST00000341627 PCF11O94913 1555 aaKnown RBP24.63■■□□□ 1.53
TNFRSF12A-202ENST00000341627 AEBP2Q6ZN18 517 aaPredicted RBP24.62■■□□□ 1.53
TNFRSF12A-202ENST00000341627 FYCO1Q9BQS8 1478 aa24.62■■□□□ 1.53
TNFRSF12A-202ENST00000341627 CDK11AQ9UQ88 783 aaPredicted RBP24.61■■□□□ 1.53
TNFRSF12A-202ENST00000341627 CCDC18Q5T9S5 1454 aa24.58■■□□□ 1.53
TNFRSF12A-202ENST00000341627 PHLDB1Q86UU1 1377 aa24.57■■□□□ 1.52
TNFRSF12A-202ENST00000341627 ARAP3Q8WWN8 1544 aa24.56■■□□□ 1.52
TNFRSF12A-202ENST00000341627 KDM4FA0A1W2PPD8 638 aa24.56■■□□□ 1.52
TNFRSF12A-202ENST00000341627 NEO1Q92859 1461 aa24.53■■□□□ 1.52
TNFRSF12A-202ENST00000341627 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.53■■□□□ 1.52
TNFRSF12A-202ENST00000341627 LRRIQ1Q96JM4 1722 aa24.51■■□□□ 1.51
TNFRSF12A-202ENST00000341627 RAPGEF3O95398 923 aa24.49■■□□□ 1.51
TNFRSF12A-202ENST00000341627 TROQ12816 1431 aaPredicted RBP24.48■■□□□ 1.51
TNFRSF12A-202ENST00000341627 VPS8Q8N3P4 1428 aa24.48■■□□□ 1.51
TNFRSF12A-202ENST00000341627 TTC37Q6PGP7 1564 aa24.46■■□□□ 1.51
TNFRSF12A-202ENST00000341627 FANCAO15360 1455 aa24.44■■□□□ 1.5
TNFRSF12A-202ENST00000341627 PLCH2O75038 1416 aa24.44■■□□□ 1.5
TNFRSF12A-202ENST00000341627 AKNAQ7Z591 1439 aa24.44■■□□□ 1.5
TNFRSF12A-202ENST00000341627 KIF14Q15058 1648 aa24.41■■□□□ 1.5
TNFRSF12A-202ENST00000341627 ADGRL1O94910 1474 aa24.38■■□□□ 1.49
TNFRSF12A-202ENST00000341627 DENND4BO75064 1496 aaPredicted RBP24.37■■□□□ 1.49
TNFRSF12A-202ENST00000341627 MTUS2Q5JR59 1369 aa24.35■■□□□ 1.49
TNFRSF12A-202ENST00000341627 EFCAB2Q5VUJ9 269 aa24.35■■□□□ 1.49
TNFRSF12A-202ENST00000341627 FRMPD1Q5SYB0 1578 aa24.34■■□□□ 1.49
TNFRSF12A-202ENST00000341627 SCAPERQ9BY12 1400 aa24.3■■□□□ 1.48
TNFRSF12A-202ENST00000341627 CFAP74Q9C0B2 1584 aa24.29■■□□□ 1.48
TNFRSF12A-202ENST00000341627 MYO5CQ9NQX4 1742 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms