RNA–Protein interactions for RNA: ENST00000341547.8

LMO7-202, Transcript of LIM domain 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LMO7, Length 7,237 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-202ENST00000341547 NCLP19338 710 aaKnown RBP9.87□□□□□ -0.83
LMO7-202ENST00000341547 FBLN2P98095 1184 aa9.86□□□□□ -0.83
LMO7-202ENST00000341547 LAS1LQ9Y4W2 734 aaKnown RBP9.86□□□□□ -0.83
LMO7-202ENST00000341547 ZCCHC6Q5VYS8 1495 aaKnown RBP9.85□□□□□ -0.83
LMO7-202ENST00000341547 PTMAP06454 111 aaKnown RBP9.85□□□□□ -0.83
LMO7-202ENST00000341547 TSHZ2Q9NRE2 1034 aa9.85□□□□□ -0.83
LMO7-202ENST00000341547 WDR43Q15061 677 aaKnown RBP eCLIP9.84□□□□□ -0.83
LMO7-202ENST00000341547 CHGAP10645 457 aaKnown RBP9.83□□□□□ -0.84
LMO7-202ENST00000341547 CDK11BP21127 795 aaKnown RBP9.81□□□□□ -0.84
LMO7-202ENST00000341547 ARID4BQ4LE39 1312 aaPredicted RBP9.8□□□□□ -0.84
LMO7-202ENST00000341547 GOLGA6L22H0YM25 854 aa9.8□□□□□ -0.84
LMO7-202ENST00000341547 KDM2AQ9Y2K7 1162 aa9.79□□□□□ -0.84
LMO7-202ENST00000341547 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.79□□□□□ -0.84
LMO7-202ENST00000341547 L1TD1Q5T7N2 865 aaKnown RBP9.78□□□□□ -0.84
LMO7-202ENST00000341547 PLCB2Q00722 1185 aa9.77□□□□□ -0.84
LMO7-202ENST00000341547 MYH16Q9H6N6 1097 aa9.77□□□□□ -0.84
LMO7-202ENST00000341547 CEP162Q5TB80 1403 aa9.76□□□□□ -0.85
LMO7-202ENST00000341547 PABPN1Q86U42 306 aaKnown RBP eCLIP9.76□□□□□ -0.85
LMO7-202ENST00000341547 CHIC2Q9UKJ5 165 aa9.76□□□□□ -0.85
LMO7-202ENST00000341547 CCER2I3L3R5 266 aa9.75□□□□□ -0.85
LMO7-202ENST00000341547 EEA1Q15075 1411 aa9.74□□□□□ -0.85
LMO7-202ENST00000341547 PLPPR3Q6T4P5 718 aa9.74□□□□□ -0.85
LMO7-202ENST00000341547 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.73□□□□□ -0.851e-7■■□□□ 12.5
LMO7-202ENST00000341547 GOLGA3Q08378 1498 aa9.73□□□□□ -0.85
LMO7-202ENST00000341547 CLIP1P30622 1438 aa9.73□□□□□ -0.85
LMO7-202ENST00000341547 STAG3Q9UJ98 1225 aa9.73□□□□□ -0.85
LMO7-202ENST00000341547 EIF4G2P78344 907 aaKnown RBP eCLIP9.73□□□□□ -0.85
LMO7-202ENST00000341547 B4GALNT3Q6L9W6 998 aa9.72□□□□□ -0.85
LMO7-202ENST00000341547 ZRSR1Q15695 479 aaKnown RBP9.72□□□□□ -0.85
LMO7-202ENST00000341547 ARID3AQ99856 593 aa9.72□□□□□ -0.85
LMO7-202ENST00000341547 TULP1O00294 542 aaPredicted RBP9.71□□□□□ -0.85
LMO7-202ENST00000341547 SENP3Q9H4L4 574 aaPredicted RBP9.71□□□□□ -0.86
LMO7-202ENST00000341547 RGS3P49796 1198 aa9.71□□□□□ -0.86
LMO7-202ENST00000341547 TAOK2Q9UL54 1235 aa9.7□□□□□ -0.86
LMO7-202ENST00000341547 RSPH6AQ9H0K4 717 aa9.69□□□□□ -0.86
LMO7-202ENST00000341547 TNIKQ9UKE5 1360 aa9.69□□□□□ -0.86
LMO7-202ENST00000341547 ZBTB7CA1YPR0 619 aa9.69□□□□□ -0.86
LMO7-202ENST00000341547 PLEKHG5O94827 1062 aa9.68□□□□□ -0.86
LMO7-202ENST00000341547 SPRYD3Q8NCJ5 442 aa9.67□□□□□ -0.86
LMO7-202ENST00000341547 HSP90AB1P08238 724 aaKnown RBP9.66□□□□□ -0.86
LMO7-202ENST00000341547 MSNP26038 577 aaKnown RBP9.66□□□□□ -0.86
LMO7-202ENST00000341547 IPO9Q96P70 1041 aaKnown RBP9.66□□□□□ -0.86
LMO7-202ENST00000341547 FTSJ3Q8IY81 847 aaKnown RBP9.65□□□□□ -0.86
LMO7-202ENST00000341547 A0A0G2JS52 829 aa9.65□□□□□ -0.86
LMO7-202ENST00000341547 FANCIQ9NVI1 1328 aa9.65□□□□□ -0.86
LMO7-202ENST00000341547 ESF1Q9H501 851 aaKnown RBP9.64□□□□□ -0.87
LMO7-202ENST00000341547 USP35Q9P2H5 1018 aa9.64□□□□□ -0.87
LMO7-202ENST00000341547 CASC1Q6TDU7 716 aa9.63□□□□□ -0.87
LMO7-202ENST00000341547 SCRIBQ14160 1630 aa9.63□□□□□ -0.87
LMO7-202ENST00000341547 NEUROD2Q15784 382 aa9.62□□□□□ -0.87
LMO7-202ENST00000341547 TIMELESSQ9UNS1 1208 aa9.62□□□□□ -0.87
LMO7-202ENST00000341547 PNNQ9H307 717 aaKnown RBP9.62□□□□□ -0.87
LMO7-202ENST00000341547 CHAF1AQ13111 956 aaPredicted RBP9.62□□□□□ -0.87
LMO7-202ENST00000341547 PTMSP20962 102 aa9.62□□□□□ -0.87
LMO7-202ENST00000341547 TCERG1O14776 1098 aaKnown RBP9.61□□□□□ -0.87
LMO7-202ENST00000341547 FRAT1Q92837 279 aaPredicted RBP9.61□□□□□ -0.87
LMO7-202ENST00000341547 GZF1Q9H116 711 aaPredicted RBP9.6□□□□□ -0.87
LMO7-202ENST00000341547 RRP7BPQ9NSQ0 103 aa9.59□□□□□ -0.87
LMO7-202ENST00000341547 CEP164Q9UPV0 1460 aa9.59□□□□□ -0.87
LMO7-202ENST00000341547 DRC7Q8IY82 874 aa9.58□□□□□ -0.88
LMO7-202ENST00000341547 RGL3Q3MIN7 710 aa9.58□□□□□ -0.88
LMO7-202ENST00000341547 HSP90AA2PQ14568 343 aaPredicted RBP9.57□□□□□ -0.88
LMO7-202ENST00000341547 NAP1L2Q9ULW6 460 aaPredicted RBP9.57□□□□□ -0.88
LMO7-202ENST00000341547 GOLGA6L6A8MZA4 724 aa9.56□□□□□ -0.88
LMO7-202ENST00000341547 C14orf37Q86TY3 774 aa9.56□□□□□ -0.88
LMO7-202ENST00000341547 HSCBQ8IWL3 235 aa9.56□□□□□ -0.88
LMO7-202ENST00000341547 GOLGA6L3A6NEY3 463 aa9.55□□□□□ -0.88
LMO7-202ENST00000341547 FGD1P98174 961 aa9.55□□□□□ -0.88
LMO7-202ENST00000341547 NRDCO43847 1150 aa9.54□□□□□ -0.88
LMO7-202ENST00000341547 RB1CC1Q8TDY2 1594 aa9.54□□□□□ -0.88
LMO7-202ENST00000341547 ABCC9O60706 1549 aa9.54□□□□□ -0.88
LMO7-202ENST00000341547 RSF1Q96T23 1441 aaPredicted RBP9.54□□□□□ -0.88
LMO7-202ENST00000341547 MTUS2Q5JR59 1369 aa9.54□□□□□ -0.88
LMO7-202ENST00000341547 GOLGA6L4A6NEF3 574 aa9.53□□□□□ -0.88
LMO7-202ENST00000341547 TNNT3P45378 269 aaPredicted RBP9.53□□□□□ -0.88
LMO7-202ENST00000341547 PRKCSHP14314 528 aaPredicted RBP9.53□□□□□ -0.88
LMO7-202ENST00000341547 KNSTRNQ9Y448 316 aa9.53□□□□□ -0.88
LMO7-202ENST00000341547 TSPY4P0CV99 314 aa9.53□□□□□ -0.88
LMO7-202ENST00000341547 TSPY10P0CW01 314 aa9.53□□□□□ -0.88
LMO7-202ENST00000341547 KCNJ4P48050 445 aa9.53□□□□□ -0.88
LMO7-202ENST00000341547 VSIG10Q8N0Z9 540 aa9.53□□□□□ -0.88
LMO7-202ENST00000341547 GSE1Q14687 1217 aa9.52□□□□□ -0.89
LMO7-202ENST00000341547 SLKQ9H2G2 1235 aaPredicted RBP9.52□□□□□ -0.89
LMO7-202ENST00000341547 CC2D1BQ5T0F9 858 aaKnown RBP9.51□□□□□ -0.89
LMO7-202ENST00000341547 NCBP3Q53F19 620 aaKnown RBP9.5□□□□□ -0.89
LMO7-202ENST00000341547 CFAP53Q96M91 514 aa9.5□□□□□ -0.89
LMO7-202ENST00000341547 GBP4Q96PP9 640 aa9.5□□□□□ -0.89
LMO7-202ENST00000341547 CCNB3Q8WWL7 1395 aa9.5□□□□□ -0.89
LMO7-202ENST00000341547 SIN3AQ96ST3 1273 aa9.5□□□□□ -0.89
LMO7-202ENST00000341547 MS4A1P11836 297 aa9.49□□□□□ -0.89
LMO7-202ENST00000341547 OS9Q13438 667 aaPredicted RBP9.48□□□□□ -0.89
LMO7-202ENST00000341547 CARD11Q9BXL7 1154 aa9.48□□□□□ -0.89
LMO7-202ENST00000341547 SETD5Q9C0A6 1442 aa9.48□□□□□ -0.89
LMO7-202ENST00000341547 KIAA2012Q0VF49 1180 aa9.47□□□□□ -0.89
LMO7-202ENST00000341547 CHMP4BQ9H444 224 aaKnown RBP9.47□□□□□ -0.89
LMO7-202ENST00000341547 NUDCQ9Y266 331 aa9.47□□□□□ -0.89
LMO7-202ENST00000341547 CFAP44Q96MT7 982 aa9.47□□□□□ -0.89
LMO7-202ENST00000341547 MAPK8IP3Q9UPT6 1336 aa9.46□□□□□ -0.9
LMO7-202ENST00000341547 CDCA8Q53HL2 280 aa9.46□□□□□ -0.9
LMO7-202ENST00000341547 PKNOX2Q96KN3 472 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms