RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 ADAMTS12P58397 1594 aa17.61■□□□□ 0.41
TPM3-207ENST00000341372 CNKSR2Q8WXI2 1034 aa17.55■□□□□ 0.4
TPM3-207ENST00000341372 CLASP1Q7Z460 1538 aa17.54■□□□□ 0.4
TPM3-207ENST00000341372 FHAD1B1AJZ9 1412 aa17.54■□□□□ 0.4
TPM3-207ENST00000341372 KIF27Q86VH2 1401 aa17.53■□□□□ 0.4
TPM3-207ENST00000341372 PIAS4Q8N2W9 510 aaPredicted RBP17.53■□□□□ 0.4
TPM3-207ENST00000341372 CHMP7Q8WUX9 453 aaPredicted RBP17.52■□□□□ 0.4
TPM3-207ENST00000341372 GRIN2AQ12879 1464 aa17.52■□□□□ 0.4
TPM3-207ENST00000341372 FBLN2P98095 1184 aa17.52■□□□□ 0.39
TPM3-207ENST00000341372 CUL7Q14999 1698 aa17.47■□□□□ 0.39
TPM3-207ENST00000341372 PLCB2Q00722 1185 aa17.47■□□□□ 0.39
TPM3-207ENST00000341372 NUP160Q12769 1436 aa17.46■□□□□ 0.39
TPM3-207ENST00000341372 RIMBP3CA6NJZ7 1639 aa17.46■□□□□ 0.39
TPM3-207ENST00000341372 RIMBP3BA6NNM3 1639 aa17.46■□□□□ 0.39
TPM3-207ENST00000341372 RIMBP3Q9UFD9 1639 aa17.46■□□□□ 0.39
TPM3-207ENST00000341372 IGF1RP08069 1367 aa17.46■□□□□ 0.39
TPM3-207ENST00000341372 ARHGEF11O15085 1522 aa17.46■□□□□ 0.38
TPM3-207ENST00000341372 CEP170Q5SW79 1584 aa17.44■□□□□ 0.38
TPM3-207ENST00000341372 TRIM41Q8WV44 630 aa17.4■□□□□ 0.38
TPM3-207ENST00000341372 TAOK2Q9UL54 1235 aa17.37■□□□□ 0.37
TPM3-207ENST00000341372 RUSC2Q8N2Y8 1516 aa17.36■□□□□ 0.37
TPM3-207ENST00000341372 SHROOM2Q13796 1616 aa17.36■□□□□ 0.37
TPM3-207ENST00000341372 CARMIL1Q5VZK9 1371 aa17.34■□□□□ 0.37
TPM3-207ENST00000341372 BCANQ96GW7 911 aa17.34■□□□□ 0.37
TPM3-207ENST00000341372 ARAP1Q96P48 1450 aa17.32■□□□□ 0.36
TPM3-207ENST00000341372 KIAA0586Q9BVV6 1533 aa17.27■□□□□ 0.36
TPM3-207ENST00000341372 RAPGEF2Q9Y4G8 1499 aa17.26■□□□□ 0.35
TPM3-207ENST00000341372 ERCC6L2Q5T890 1561 aa17.25■□□□□ 0.35
TPM3-207ENST00000341372 EEA1Q15075 1411 aa17.24■□□□□ 0.35
TPM3-207ENST00000341372 PRXQ9BXM0 1461 aa17.24■□□□□ 0.35
TPM3-207ENST00000341372 HAP1P54257 671 aaPredicted RBP17.23■□□□□ 0.35
TPM3-207ENST00000341372 PRG4Q92954 1404 aaPredicted RBP17.19■□□□□ 0.34
TPM3-207ENST00000341372 IQGAP2Q13576 1575 aa17.19■□□□□ 0.34
TPM3-207ENST00000341372 JPH4Q96JJ6 628 aa17.18■□□□□ 0.34
TPM3-207ENST00000341372 CYB5RLQ6IPT4 315 aa17.18■□□□□ 0.34
TPM3-207ENST00000341372 CTTNBP2Q8WZ74 1663 aa17.15■□□□□ 0.34
TPM3-207ENST00000341372 UGGT2Q9NYU1 1516 aa17.11■□□□□ 0.33
TPM3-207ENST00000341372 KIF21BO75037 1637 aa17.08■□□□□ 0.33
TPM3-207ENST00000341372 TPRNQ4KMQ1 711 aa17.08■□□□□ 0.33
TPM3-207ENST00000341372 DISP1Q96F81 1524 aa17.07■□□□□ 0.32
TPM3-207ENST00000341372 DAXXQ9UER7 740 aaPredicted RBP17.06■□□□□ 0.32
TPM3-207ENST00000341372 CARMIL2Q6F5E8 1435 aa17.05■□□□□ 0.32
TPM3-207ENST00000341372 KIAA0556O60303 1618 aa17.03■□□□□ 0.32
TPM3-207ENST00000341372 SCAF1Q9H7N4 1312 aaKnown RBP17.02■□□□□ 0.32
TPM3-207ENST00000341372 TNIKQ9UKE5 1360 aa17■□□□□ 0.31
TPM3-207ENST00000341372 FAM9AQ8IZU1 332 aaPredicted RBP16.99■□□□□ 0.31
TPM3-207ENST00000341372 ATXN8OSP0DMR3 200 aa16.98■□□□□ 0.31
TPM3-207ENST00000341372 ADCY10Q96PN6 1610 aa16.98■□□□□ 0.31
TPM3-207ENST00000341372 GOLGA3Q08378 1498 aa16.98■□□□□ 0.31
TPM3-207ENST00000341372 PTPRGP23470 1445 aa16.97■□□□□ 0.31
TPM3-207ENST00000341372 SAMD9Q5K651 1589 aa16.94■□□□□ 0.3
TPM3-207ENST00000341372 SLC4A2P04920 1241 aa16.94■□□□□ 0.3
TPM3-207ENST00000341372 TIMELESSQ9UNS1 1208 aa16.92■□□□□ 0.3
TPM3-207ENST00000341372 UHRF1BP1LA0JNW5 1464 aa16.92■□□□□ 0.3
TPM3-207ENST00000341372 VSIG10Q8N0Z9 540 aa16.92■□□□□ 0.3
TPM3-207ENST00000341372 MAPKBP1O60336 1514 aa16.89■□□□□ 0.29
TPM3-207ENST00000341372 ABCC2Q92887 1545 aa16.89■□□□□ 0.29
TPM3-207ENST00000341372 UACAQ9BZF9 1416 aa16.88■□□□□ 0.29
TPM3-207ENST00000341372 ABCA8O94911 1581 aa16.85■□□□□ 0.29
TPM3-207ENST00000341372 EFCAB5A4FU69 1503 aa16.85■□□□□ 0.29
TPM3-207ENST00000341372 KDM5BQ9UGL1 1544 aa16.83■□□□□ 0.28
TPM3-207ENST00000341372 PLB1Q6P1J6 1458 aa16.82■□□□□ 0.28
TPM3-207ENST00000341372 RNF216Q9NWF9 866 aaPredicted RBP16.81■□□□□ 0.28
TPM3-207ENST00000341372 KIF13AQ9H1H9 1805 aa16.81■□□□□ 0.28
TPM3-207ENST00000341372 TTBK1Q5TCY1 1321 aaPredicted RBP16.8■□□□□ 0.28
TPM3-207ENST00000341372 NPM1P06748 294 aaKnown RBP eCLIP16.8■□□□□ 0.28
TPM3-207ENST00000341372 TRHP20396 242 aaPredicted RBP16.79■□□□□ 0.28
TPM3-207ENST00000341372 ZCCHC11Q5TAX3 1644 aaKnown RBP16.79■□□□□ 0.28
TPM3-207ENST00000341372 ABCC10Q5T3U5 1492 aa16.78■□□□□ 0.28
TPM3-207ENST00000341372 DIP2BQ9P265 1576 aa16.78■□□□□ 0.28
TPM3-207ENST00000341372 UBTFP17480 764 aaKnown RBP16.77■□□□□ 0.28
TPM3-207ENST00000341372 MAPK8IP2Q13387 824 aaPredicted RBP16.77■□□□□ 0.28
TPM3-207ENST00000341372 FHOD3Q2V2M9 1422 aa16.76■□□□□ 0.27
TPM3-207ENST00000341372 TULP1O00294 542 aaPredicted RBP16.75■□□□□ 0.27
TPM3-207ENST00000341372 KDM2AQ9Y2K7 1162 aa16.75■□□□□ 0.27
TPM3-207ENST00000341372 RAPGEF6Q8TEU7 1601 aa16.75■□□□□ 0.27
TPM3-207ENST00000341372 MYCNP04198 464 aaPredicted RBP16.74■□□□□ 0.27
TPM3-207ENST00000341372 ARHGAP35Q9NRY4 1499 aa16.74■□□□□ 0.27
TPM3-207ENST00000341372 P3H3Q8IVL6 736 aa16.74■□□□□ 0.27
TPM3-207ENST00000341372 ASXL2Q76L83 1435 aa16.73■□□□□ 0.27
TPM3-207ENST00000341372 ARXQ96QS3 562 aa16.72■□□□□ 0.27
TPM3-207ENST00000341372 GLI2P10070 1586 aa16.7■□□□□ 0.26
TPM3-207ENST00000341372 RANGAP1P46060 587 aaPredicted RBP16.69■□□□□ 0.26
TPM3-207ENST00000341372 NUP153P49790 1475 aaKnown RBP16.68■□□□□ 0.26
TPM3-207ENST00000341372 ATP10BO94823 1461 aa16.67■□□□□ 0.26
TPM3-207ENST00000341372 WDR7Q9Y4E6 1490 aa16.67■□□□□ 0.26
TPM3-207ENST00000341372 EPRSP07814 1512 aaKnown RBP16.66■□□□□ 0.26
TPM3-207ENST00000341372 FMN1Q68DA7 1419 aa16.65■□□□□ 0.26
TPM3-207ENST00000341372 FAM69CQ0P6D2 419 aa16.65■□□□□ 0.26
TPM3-207ENST00000341372 MAP3K4Q9Y6R4 1608 aa16.62■□□□□ 0.25
TPM3-207ENST00000341372 HECW1Q76N89 1606 aa16.6■□□□□ 0.25
TPM3-207ENST00000341372 CLIP1P30622 1438 aa16.6■□□□□ 0.25
TPM3-207ENST00000341372 PPRC1Q5VV67 1664 aaKnown RBP16.6■□□□□ 0.25
TPM3-207ENST00000341372 CFAP43Q8NDM7 1665 aa16.57■□□□□ 0.24
TPM3-207ENST00000341372 TSPOAP1O95153 1857 aa16.57■□□□□ 0.24
TPM3-207ENST00000341372 PCF11O94913 1555 aaKnown RBP16.55■□□□□ 0.24
TPM3-207ENST00000341372 LRRIQ1Q96JM4 1722 aa16.53■□□□□ 0.24
TPM3-207ENST00000341372 ABCA9Q8IUA7 1624 aa16.53■□□□□ 0.24
TPM3-207ENST00000341372 CDK13Q14004 1512 aaKnown RBP16.53■□□□□ 0.24
TPM3-207ENST00000341372 CEP162Q5TB80 1403 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms