RNA–Protein interactions for RNA: ENST00000340699.7

PBX1-201, Transcript of PBX homeobox 1, humanhuman

TSL 4

Gene PBX1, Length 734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-201ENST00000340699 ERCC6L2Q5T890 1561 aa37.96■■■■□ 3.67
PBX1-201ENST00000340699 KIAA0586Q9BVV6 1533 aa37.95■■■■□ 3.67
PBX1-201ENST00000340699 PRG4Q92954 1404 aaPredicted RBP37.93■■■■□ 3.66
PBX1-201ENST00000340699 RAPGEF2Q9Y4G8 1499 aa37.9■■■■□ 3.66
PBX1-201ENST00000340699 CHIC1Q5VXU3 224 aa37.7■■■■□ 3.63
PBX1-201ENST00000340699 IQGAP2Q13576 1575 aa37.7■■■■□ 3.63
PBX1-201ENST00000340699 CSRNP3Q8WYN3 585 aa37.68■■■■□ 3.62
PBX1-201ENST00000340699 PRXQ9BXM0 1461 aa37.67■■■■□ 3.62
PBX1-201ENST00000340699 EEA1Q15075 1411 aa37.66■■■■□ 3.62
PBX1-201ENST00000340699 TRHP20396 242 aaPredicted RBP37.61■■■■□ 3.61
PBX1-201ENST00000340699 CARMIL2Q6F5E8 1435 aa37.61■■■■□ 3.61
PBX1-201ENST00000340699 FAM9AQ8IZU1 332 aaPredicted RBP37.53■■■■□ 3.6
PBX1-201ENST00000340699 CTTNBP2Q8WZ74 1663 aa37.52■■■■□ 3.6
PBX1-201ENST00000340699 UGGT2Q9NYU1 1516 aa37.47■■■■□ 3.59
PBX1-201ENST00000340699 PTPRGP23470 1445 aa37.47■■■■□ 3.59
PBX1-201ENST00000340699 TNIKQ9UKE5 1360 aa37.47■■■■□ 3.59
PBX1-201ENST00000340699 TTBK1Q5TCY1 1321 aaPredicted RBP37.45■■■■□ 3.59
PBX1-201ENST00000340699 DISP1Q96F81 1524 aa37.42■■■■□ 3.58
PBX1-201ENST00000340699 NPM1P06748 294 aaKnown RBP eCLIP37.41■■■■□ 3.58
PBX1-201ENST00000340699 KIAA0556O60303 1618 aa37.32■■■■□ 3.57
PBX1-201ENST00000340699 ADCY10Q96PN6 1610 aa37.32■■■■□ 3.57
PBX1-201ENST00000340699 GOLGA3Q08378 1498 aa37.32■■■■□ 3.56
PBX1-201ENST00000340699 KIF21BO75037 1637 aa37.24■■■■□ 3.55
PBX1-201ENST00000340699 UACAQ9BZF9 1416 aa37.19■■■■□ 3.54
PBX1-201ENST00000340699 UHRF1BP1LA0JNW5 1464 aa37.14■■■■□ 3.54
PBX1-201ENST00000340699 MAPKBP1O60336 1514 aa37.14■■■■□ 3.54
PBX1-201ENST00000340699 ABCC2Q92887 1545 aa37.12■■■■□ 3.53
PBX1-201ENST00000340699 P3H3Q8IVL6 736 aa37.08■■■■□ 3.53
PBX1-201ENST00000340699 EHMT2Q96KQ7 1210 aa37.07■■■■□ 3.52
PBX1-201ENST00000340699 UBTFP17480 764 aaKnown RBP37.05■■■■□ 3.52
PBX1-201ENST00000340699 RANGAP1P46060 587 aaPredicted RBP37.05■■■■□ 3.52
PBX1-201ENST00000340699 ABCC10Q5T3U5 1492 aa37.01■■■■□ 3.52
PBX1-201ENST00000340699 FAM69CQ0P6D2 419 aa37.01■■■■□ 3.52
PBX1-201ENST00000340699 KIF13AQ9H1H9 1805 aa37■■■■□ 3.51
PBX1-201ENST00000340699 SAMD9Q5K651 1589 aa37■■■■□ 3.51
PBX1-201ENST00000340699 PLB1Q6P1J6 1458 aa36.99■■■■□ 3.51
PBX1-201ENST00000340699 KDM5BQ9UGL1 1544 aa36.96■■■■□ 3.51
PBX1-201ENST00000340699 ABCA8O94911 1581 aa36.92■■■■□ 3.5
PBX1-201ENST00000340699 DIP2BQ9P265 1576 aa36.91■■■■□ 3.5
PBX1-201ENST00000340699 ASXL2Q76L83 1435 aa36.91■■■■□ 3.5
PBX1-201ENST00000340699 ZCCHC11Q5TAX3 1644 aaKnown RBP36.88■■■■□ 3.5
PBX1-201ENST00000340699 EFCAB5A4FU69 1503 aa36.84■■■■□ 3.49
PBX1-201ENST00000340699 FHOD3Q2V2M9 1422 aa36.81■■■■□ 3.48
PBX1-201ENST00000340699 RAPGEF6Q8TEU7 1601 aa36.73■■■■□ 3.47
PBX1-201ENST00000340699 GLI2P10070 1586 aa36.7■■■■□ 3.47
PBX1-201ENST00000340699 ARID3CA6NKF2 412 aa36.7■■■■□ 3.47
PBX1-201ENST00000340699 WDR7Q9Y4E6 1490 aa36.69■■■■□ 3.46
PBX1-201ENST00000340699 EPRSP07814 1512 aaKnown RBP36.69■■■■□ 3.46
PBX1-201ENST00000340699 TSPOAP1O95153 1857 aa36.67■■■■□ 3.46
PBX1-201ENST00000340699 ATP10BO94823 1461 aa36.65■■■■□ 3.46
PBX1-201ENST00000340699 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.62■■■■□ 3.45
PBX1-201ENST00000340699 HNRNPUL2Q1KMD3 747 aaKnown RBP36.62■■■■□ 3.45
PBX1-201ENST00000340699 ARHGAP35Q9NRY4 1499 aa36.61■■■■□ 3.45
PBX1-201ENST00000340699 KCNH8Q96L42 1107 aa36.6■■■■□ 3.45
PBX1-201ENST00000340699 NUP153P49790 1475 aaKnown RBP36.56■■■■□ 3.44
PBX1-201ENST00000340699 FMN1Q68DA7 1419 aa36.54■■■■□ 3.44
PBX1-201ENST00000340699 MAP3K4Q9Y6R4 1608 aa36.52■■■■□ 3.44
PBX1-201ENST00000340699 ATP1B4Q9UN42 357 aaPredicted RBP36.45■■■■□ 3.43
PBX1-201ENST00000340699 PPRC1Q5VV67 1664 aaKnown RBP36.45■■■■□ 3.42
PBX1-201ENST00000340699 TEX14Q8IWB6 1497 aa36.43■■■■□ 3.42
PBX1-201ENST00000340699 KDM6BO15054 1643 aa36.42■■■■□ 3.42
PBX1-201ENST00000340699 PLEKHD1A6NEE1 506 aa36.41■■■■□ 3.42
PBX1-201ENST00000340699 CFAP43Q8NDM7 1665 aa36.41■■■■□ 3.42
PBX1-201ENST00000340699 CD109Q6YHK3 1445 aa36.41■■■■□ 3.42
PBX1-201ENST00000340699 CLIP1P30622 1438 aa36.37■■■■□ 3.41
PBX1-201ENST00000340699 HECW1Q76N89 1606 aa36.36■■■■□ 3.41
PBX1-201ENST00000340699 MAGI3Q5TCQ9 1506 aa36.31■■■■□ 3.4
PBX1-201ENST00000340699 CDK13Q14004 1512 aaKnown RBP36.29■■■■□ 3.4
PBX1-201ENST00000340699 ABCA9Q8IUA7 1624 aa36.27■■■■□ 3.4
PBX1-201ENST00000340699 CDK11AQ9UQ88 783 aaPredicted RBP36.24■■■■□ 3.39
PBX1-201ENST00000340699 CASKIN1Q8WXD9 1431 aa36.2■■■■□ 3.39
PBX1-201ENST00000340699 LOC105371045A0A1W2PR82 267 aa36.18■■■■□ 3.38
PBX1-201ENST00000340699 PCF11O94913 1555 aaKnown RBP36.15■■■■□ 3.38
PBX1-201ENST00000340699 COL17A1Q9UMD9 1497 aaPredicted RBP36.14■■■■□ 3.38
PBX1-201ENST00000340699 CEP162Q5TB80 1403 aa36.14■■■■□ 3.38
PBX1-201ENST00000340699 CCDC18Q5T9S5 1454 aa36.1■■■■□ 3.37
PBX1-201ENST00000340699 FYCO1Q9BQS8 1478 aa36.1■■■■□ 3.37
PBX1-201ENST00000340699 LRRIQ1Q96JM4 1722 aa36.09■■■■□ 3.37
PBX1-201ENST00000340699 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.08■■■■□ 3.37
PBX1-201ENST00000340699 PHLDB1Q86UU1 1377 aa36.08■■■■□ 3.37
PBX1-201ENST00000340699 TROQ12816 1431 aaPredicted RBP36.03■■■■□ 3.36
PBX1-201ENST00000340699 NEO1Q92859 1461 aa36.03■■■■□ 3.36
PBX1-201ENST00000340699 TTC37Q6PGP7 1564 aa36.01■■■■□ 3.35
PBX1-201ENST00000340699 ARAP3Q8WWN8 1544 aa36■■■■□ 3.35
PBX1-201ENST00000340699 KIF14Q15058 1648 aa35.97■■■■□ 3.35
PBX1-201ENST00000340699 FANCAO15360 1455 aa35.92■■■■□ 3.34
PBX1-201ENST00000340699 CFAP74Q9C0B2 1584 aa35.92■■■■□ 3.34
PBX1-201ENST00000340699 PLCH2O75038 1416 aa35.91■■■■□ 3.34
PBX1-201ENST00000340699 AEBP2Q6ZN18 517 aaPredicted RBP35.88■■■■□ 3.33
PBX1-201ENST00000340699 AKNAQ7Z591 1439 aa35.88■■■■□ 3.33
PBX1-201ENST00000340699 MYO5CQ9NQX4 1742 aa35.86■■■■□ 3.33
PBX1-201ENST00000340699 RAPGEF3O95398 923 aa35.85■■■■□ 3.33
PBX1-201ENST00000340699 EFCAB2Q5VUJ9 269 aa35.82■■■■□ 3.32
PBX1-201ENST00000340699 DENND4BO75064 1496 aaPredicted RBP35.79■■■■□ 3.32
PBX1-201ENST00000340699 MTUS2Q5JR59 1369 aa35.75■■■■□ 3.31
PBX1-201ENST00000340699 ARHGAP5Q13017 1502 aa35.74■■■■□ 3.31
PBX1-201ENST00000340699 ADGRL1O94910 1474 aa35.73■■■■□ 3.31
PBX1-201ENST00000340699 VPS8Q8N3P4 1428 aa35.73■■■■□ 3.31
PBX1-201ENST00000340699 FRMPD1Q5SYB0 1578 aa35.7■■■■□ 3.31
PBX1-201ENST00000340699 SCAPERQ9BY12 1400 aa35.7■■■■□ 3.31
Retrieved 100 of 20,778 RNA–protein pairs in 157.8 ms