RNA–Protein interactions for RNA: ENST00000340473.7

GTF2F2-201, Transcript of general transcription factor IIF subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F2, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F2-201ENST00000340473 CEP162Q5TB80 1403 aa21.47■■□□□ 1.03
GTF2F2-201ENST00000340473 CEP170Q5SW79 1584 aa21.47■■□□□ 1.03
GTF2F2-201ENST00000340473 NUP160Q12769 1436 aa21.45■■□□□ 1.02
GTF2F2-201ENST00000340473 RANGAP1P46060 587 aaPredicted RBP21.44■■□□□ 1.02
GTF2F2-201ENST00000340473 KIAA0586Q9BVV6 1533 aa21.4■■□□□ 1.02
GTF2F2-201ENST00000340473 CLIP1P30622 1438 aa21.4■■□□□ 1.02
GTF2F2-201ENST00000340473 IQGAP2Q13576 1575 aa21.39■■□□□ 1.01
GTF2F2-201ENST00000340473 ARHGAP35Q9NRY4 1499 aa21.32■■□□□ 1
GTF2F2-201ENST00000340473 UGGT2Q9NYU1 1516 aa21.29■■□□□ 1
GTF2F2-201ENST00000340473 CLASP1Q7Z460 1538 aa21.28■■□□□ 1
GTF2F2-201ENST00000340473 EFCAB5A4FU69 1503 aa21.27■■□□□ 1
GTF2F2-201ENST00000340473 SAMD9Q5K651 1589 aa21.27■■□□□ 1
GTF2F2-201ENST00000340473 ARAP1Q96P48 1450 aa21.25■□□□□ 0.99
GTF2F2-201ENST00000340473 JPH4Q96JJ6 628 aa21.24■□□□□ 0.99
GTF2F2-201ENST00000340473 P3H3Q8IVL6 736 aa21.24■□□□□ 0.99
GTF2F2-201ENST00000340473 OSCARQ8IYS5 282 aa21.22■□□□□ 0.99
GTF2F2-201ENST00000340473 DISP1Q96F81 1524 aa21.21■□□□□ 0.99
GTF2F2-201ENST00000340473 SHROOM2Q13796 1616 aa21.21■□□□□ 0.99
GTF2F2-201ENST00000340473 FHOD3Q2V2M9 1422 aa21.21■□□□□ 0.99
GTF2F2-201ENST00000340473 KIAA0556O60303 1618 aa21.19■□□□□ 0.98
GTF2F2-201ENST00000340473 PRG4Q92954 1404 aaPredicted RBP21.16■□□□□ 0.98
GTF2F2-201ENST00000340473 VPS8Q8N3P4 1428 aa21.15■□□□□ 0.98
GTF2F2-201ENST00000340473 CARMIL2Q6F5E8 1435 aa21.13■□□□□ 0.97
GTF2F2-201ENST00000340473 ERCC6L2Q5T890 1561 aa21.11■□□□□ 0.97
GTF2F2-201ENST00000340473 FMN1Q68DA7 1419 aa21.07■□□□□ 0.96
GTF2F2-201ENST00000340473 TTBK1Q5TCY1 1321 aaPredicted RBP21.04■□□□□ 0.96
GTF2F2-201ENST00000340473 PCF11O94913 1555 aaKnown RBP21.03■□□□□ 0.96
GTF2F2-201ENST00000340473 CASKIN1Q8WXD9 1431 aa21■□□□□ 0.95
GTF2F2-201ENST00000340473 FYCO1Q9BQS8 1478 aa20.98■□□□□ 0.95
GTF2F2-201ENST00000340473 PTPRGP23470 1445 aa20.98■□□□□ 0.95
GTF2F2-201ENST00000340473 PLB1Q6P1J6 1458 aa20.94■□□□□ 0.94
GTF2F2-201ENST00000340473 RAPGEF6Q8TEU7 1601 aa20.93■□□□□ 0.94
GTF2F2-201ENST00000340473 ATP1B4Q9UN42 357 aaPredicted RBP20.93■□□□□ 0.94
GTF2F2-201ENST00000340473 ABCA8O94911 1581 aa20.91■□□□□ 0.94
GTF2F2-201ENST00000340473 ARHGEF11O15085 1522 aa20.9■□□□□ 0.94
GTF2F2-201ENST00000340473 HECW1Q76N89 1606 aa20.9■□□□□ 0.94
GTF2F2-201ENST00000340473 LRRIQ1Q96JM4 1722 aa20.9■□□□□ 0.94
GTF2F2-201ENST00000340473 APLP2Q06481 763 aa20.88■□□□□ 0.93
GTF2F2-201ENST00000340473 NUP153P49790 1475 aaKnown RBP20.88■□□□□ 0.93
GTF2F2-201ENST00000340473 PPARGC1BQ86YN6 1023 aaKnown RBP20.88■□□□□ 0.93
GTF2F2-201ENST00000340473 UACAQ9BZF9 1416 aa20.86■□□□□ 0.93
GTF2F2-201ENST00000340473 TIAM1Q13009 1591 aa20.86■□□□□ 0.93
GTF2F2-201ENST00000340473 CFAP43Q8NDM7 1665 aa20.85■□□□□ 0.93
GTF2F2-201ENST00000340473 EPRSP07814 1512 aaKnown RBP20.84■□□□□ 0.93
GTF2F2-201ENST00000340473 MAP3K1Q13233 1512 aa20.84■□□□□ 0.93
GTF2F2-201ENST00000340473 RIMBP3CA6NJZ7 1639 aa20.84■□□□□ 0.93
GTF2F2-201ENST00000340473 RIMBP3BA6NNM3 1639 aa20.84■□□□□ 0.93
GTF2F2-201ENST00000340473 RIMBP3Q9UFD9 1639 aa20.84■□□□□ 0.93
GTF2F2-201ENST00000340473 ARID3CA6NKF2 412 aa20.84■□□□□ 0.93
GTF2F2-201ENST00000340473 CCDC18Q5T9S5 1454 aa20.82■□□□□ 0.92
GTF2F2-201ENST00000340473 CDK13Q14004 1512 aaKnown RBP20.82■□□□□ 0.92
GTF2F2-201ENST00000340473 ABCC2Q92887 1545 aa20.81■□□□□ 0.92
GTF2F2-201ENST00000340473 KANK4Q5T7N3 995 aaPredicted RBP20.81■□□□□ 0.92
GTF2F2-201ENST00000340473 UHRF1BP1LA0JNW5 1464 aa20.77■□□□□ 0.92
GTF2F2-201ENST00000340473 LRRC9Q6ZRR7 1453 aa20.76■□□□□ 0.91
GTF2F2-201ENST00000340473 ADCY10Q96PN6 1610 aa20.76■□□□□ 0.91
GTF2F2-201ENST00000340473 ATP10BO94823 1461 aa20.75■□□□□ 0.91
GTF2F2-201ENST00000340473 MAGI3Q5TCQ9 1506 aa20.73■□□□□ 0.91
GTF2F2-201ENST00000340473 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.73■□□□□ 0.91
GTF2F2-201ENST00000340473 HNRNPUL2Q1KMD3 747 aaKnown RBP20.73■□□□□ 0.91
GTF2F2-201ENST00000340473 KDM5BQ9UGL1 1544 aa20.7■□□□□ 0.9
GTF2F2-201ENST00000340473 CYB5RLQ6IPT4 315 aa20.69■□□□□ 0.9
GTF2F2-201ENST00000340473 MTUS2Q5JR59 1369 aa20.69■□□□□ 0.9
GTF2F2-201ENST00000340473 ZCCHC11Q5TAX3 1644 aaKnown RBP20.68■□□□□ 0.9
GTF2F2-201ENST00000340473 EHBP1L1Q8N3D4 1523 aa20.67■□□□□ 0.9
GTF2F2-201ENST00000340473 CDK11AQ9UQ88 783 aaPredicted RBP20.65■□□□□ 0.9
GTF2F2-201ENST00000340473 TROQ12816 1431 aaPredicted RBP20.62■□□□□ 0.89
GTF2F2-201ENST00000340473 PLEKHD1A6NEE1 506 aa20.61■□□□□ 0.89
GTF2F2-201ENST00000340473 SUPT6HQ7KZ85 1726 aaKnown RBP20.6■□□□□ 0.89
GTF2F2-201ENST00000340473 NCOA2Q15596 1464 aa20.58■□□□□ 0.89
GTF2F2-201ENST00000340473 KIF14Q15058 1648 aa20.56■□□□□ 0.88
GTF2F2-201ENST00000340473 PHLDB1Q86UU1 1377 aa20.56■□□□□ 0.88
GTF2F2-201ENST00000340473 NPM1P06748 294 aaKnown RBP eCLIP20.55■□□□□ 0.88
GTF2F2-201ENST00000340473 DNAJC5Q9H3Z4 198 aa20.55■□□□□ 0.88
GTF2F2-201ENST00000340473 ASXL2Q76L83 1435 aa20.52■□□□□ 0.88
GTF2F2-201ENST00000340473 TRIM26Q12899 539 aaPredicted RBP20.51■□□□□ 0.87
GTF2F2-201ENST00000340473 WDR7Q9Y4E6 1490 aa20.51■□□□□ 0.87
GTF2F2-201ENST00000340473 ABCC10Q5T3U5 1492 aa20.48■□□□□ 0.87
GTF2F2-201ENST00000340473 KCNH8Q96L42 1107 aa20.48■□□□□ 0.87
GTF2F2-201ENST00000340473 MYOM3Q5VTT5 1437 aa20.47■□□□□ 0.87
GTF2F2-201ENST00000340473 MAPKBP1O60336 1514 aa20.45■□□□□ 0.86
GTF2F2-201ENST00000340473 RRBP1Q9P2E9 1410 aaKnown RBP20.45■□□□□ 0.86
GTF2F2-201ENST00000340473 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.45■□□□□ 0.86
GTF2F2-201ENST00000340473 CCNB3Q8WWL7 1395 aa20.45■□□□□ 0.86
GTF2F2-201ENST00000340473 TTC37Q6PGP7 1564 aa20.44■□□□□ 0.86
GTF2F2-201ENST00000340473 FGD6Q6ZV73 1430 aa20.43■□□□□ 0.86
GTF2F2-201ENST00000340473 GPATCH8Q9UKJ3 1502 aaKnown RBP20.41■□□□□ 0.86
GTF2F2-201ENST00000340473 PCGF6Q9BYE7 350 aa20.41■□□□□ 0.86
GTF2F2-201ENST00000340473 CDC42BPAQ5VT25 1732 aa20.4■□□□□ 0.86
GTF2F2-201ENST00000340473 ITSN2Q9NZM3 1697 aa20.39■□□□□ 0.85
GTF2F2-201ENST00000340473 MIA2Q96PC5 1412 aa20.37■□□□□ 0.85
GTF2F2-201ENST00000340473 ABCA9Q8IUA7 1624 aa20.36■□□□□ 0.85
GTF2F2-201ENST00000340473 PTPN23Q9H3S7 1636 aa20.36■□□□□ 0.85
GTF2F2-201ENST00000340473 PREX2Q70Z35 1606 aa20.35■□□□□ 0.85
GTF2F2-201ENST00000340473 MYO5CQ9NQX4 1742 aa20.35■□□□□ 0.85
GTF2F2-201ENST00000340473 CFDP1Q9UEE9 299 aaPredicted RBP20.34■□□□□ 0.85
GTF2F2-201ENST00000340473 CDC42BPBQ9Y5S2 1711 aa20.34■□□□□ 0.85
GTF2F2-201ENST00000340473 FAM50AQ14320 339 aaKnown RBP20.34■□□□□ 0.85
GTF2F2-201ENST00000340473 TCOF1Q13428 1488 aaKnown RBP20.33■□□□□ 0.84
GTF2F2-201ENST00000340473 PLCH2O75038 1416 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms