RNA–Protein interactions for RNA: ENST00000340107.8

FGFR3-202, Transcript of fibroblast growth factor receptor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene FGFR3, Length 4,293 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR3-202ENST00000340107 PLEKHD1A6NEE1 506 aa25.32■■□□□ 1.64
FGFR3-202ENST00000340107 SALL2Q9Y467 1007 aaPredicted RBP25.32■■□□□ 1.64
FGFR3-202ENST00000340107 MYT1Q01538 1121 aa25.31■■□□□ 1.64
FGFR3-202ENST00000340107 SMARCA2P51531 1590 aa25.31■■□□□ 1.64
FGFR3-202ENST00000340107 VPS8Q8N3P4 1428 aa25.29■■□□□ 1.64
FGFR3-202ENST00000340107 RUSC2Q8N2Y8 1516 aa25.28■■□□□ 1.64
FGFR3-202ENST00000340107 CFDP1Q9UEE9 299 aaPredicted RBP25.27■■□□□ 1.64
FGFR3-202ENST00000340107 CCNB3Q8WWL7 1395 aa25.27■■□□□ 1.64
FGFR3-202ENST00000340107 ATAD2BQ9ULI0 1458 aa25.26■■□□□ 1.63
FGFR3-202ENST00000340107 TDRD9Q8NDG6 1382 aaKnown RBP25.24■■□□□ 1.63
FGFR3-202ENST00000340107 EIF4G2P78344 907 aaKnown RBP eCLIP25.23■■□□□ 1.63
FGFR3-202ENST00000340107 MRS2Q9HD23 443 aa25.2■■□□□ 1.62
FGFR3-202ENST00000340107 SMARCA4P51532 1647 aa25.19■■□□□ 1.62
FGFR3-202ENST00000340107 RGL3Q3MIN7 710 aa25.19■■□□□ 1.62
FGFR3-202ENST00000340107 TMC1Q8TDI8 760 aa25.16■■□□□ 1.62
FGFR3-202ENST00000340107 FHAD1B1AJZ9 1412 aa25.15■■□□□ 1.62
FGFR3-202ENST00000340107 ERCC6Q03468 1493 aa25.14■■□□□ 1.61
FGFR3-202ENST00000340107 SENP3-EIF4A1A0A087X0R7 540 aa25.13■■□□□ 1.61
FGFR3-202ENST00000340107 SENP3Q9H4L4 574 aaPredicted RBP25.13■■□□□ 1.61
FGFR3-202ENST00000340107 BCL11AQ9H165 835 aa25.12■■□□□ 1.61
FGFR3-202ENST00000340107 RAPGEF2Q9Y4G8 1499 aa25.12■■□□□ 1.61
FGFR3-202ENST00000340107 PLPPR3Q6T4P5 718 aa25.11■■□□□ 1.61
FGFR3-202ENST00000340107 CADPSQ9ULU8 1353 aa25.1■■□□□ 1.61
FGFR3-202ENST00000340107 IRX6P78412 446 aaPredicted RBP25.09■■□□□ 1.61
FGFR3-202ENST00000340107 CANXP27824 592 aaKnown RBP25.09■■□□□ 1.61
FGFR3-202ENST00000340107 EIF4G1Q04637 1599 aaKnown RBP25.09■■□□□ 1.61
FGFR3-202ENST00000340107 STAG3Q9UJ98 1225 aa25.09■■□□□ 1.61
FGFR3-202ENST00000340107 RTL5Q5HYW3 569 aaPredicted RBP25.05■■□□□ 1.6
FGFR3-202ENST00000340107 ESF1Q9H501 851 aaKnown RBP25.05■■□□□ 1.6
FGFR3-202ENST00000340107 SLC24A1O60721 1099 aa24.98■■□□□ 1.59
FGFR3-202ENST00000340107 PDS5BQ9NTI5 1447 aa24.95■■□□□ 1.58
FGFR3-202ENST00000340107 NEFMP07197 916 aa24.94■■□□□ 1.58
FGFR3-202ENST00000340107 FOXD1Q16676 465 aa24.94■■□□□ 1.58
FGFR3-202ENST00000340107 SETD5Q9C0A6 1442 aa24.9■■□□□ 1.58
FGFR3-202ENST00000340107 NPM2Q86SE8 214 aaKnown RBP24.9■■□□□ 1.58
FGFR3-202ENST00000340107 FHOD3Q2V2M9 1422 aa24.9■■□□□ 1.58
FGFR3-202ENST00000340107 RAB3GAP2Q9H2M9 1393 aa24.9■■□□□ 1.58
FGFR3-202ENST00000340107 CARD11Q9BXL7 1154 aa24.89■■□□□ 1.58
FGFR3-202ENST00000340107 ARHGAP35Q9NRY4 1499 aa24.85■■□□□ 1.57
FGFR3-202ENST00000340107 CCDC136Q96JN2 1154 aa24.83■■□□□ 1.57
FGFR3-202ENST00000340107 WDR43Q15061 677 aaKnown RBP eCLIP24.81■■□□□ 1.561e-6■■■■■ 28.4
FGFR3-202ENST00000340107 ZBTB47Q9UFB7 747 aaPredicted RBP24.78■■□□□ 1.56
FGFR3-202ENST00000340107 FMN1Q68DA7 1419 aa24.77■■□□□ 1.56
FGFR3-202ENST00000340107 ANP32AP39687 249 aaKnown RBP24.75■■□□□ 1.55
FGFR3-202ENST00000340107 SUPT16HQ9Y5B9 1047 aaKnown RBP24.75■■□□□ 1.55
FGFR3-202ENST00000340107 DCAF11Q8TEB1 546 aa24.75■■□□□ 1.55
FGFR3-202ENST00000340107 FANCD2Q9BXW9 1451 aa24.74■■□□□ 1.55
FGFR3-202ENST00000340107 TIMELESSQ9UNS1 1208 aa24.72■■□□□ 1.55
FGFR3-202ENST00000340107 PKD2Q13563 968 aa24.7■■□□□ 1.55
FGFR3-202ENST00000340107 IGF1RP08069 1367 aa24.7■■□□□ 1.54
FGFR3-202ENST00000340107 MPHOSPH9Q99550 1183 aa24.67■■□□□ 1.54
FGFR3-202ENST00000340107 HSPA5P11021 654 aaKnown RBP24.67■■□□□ 1.54
FGFR3-202ENST00000340107 PPP1R15AO75807 674 aaPredicted RBP24.64■■□□□ 1.53
FGFR3-202ENST00000340107 JPH4Q96JJ6 628 aa24.61■■□□□ 1.53
FGFR3-202ENST00000340107 RAD54L2Q9Y4B4 1467 aa24.61■■□□□ 1.53
FGFR3-202ENST00000340107 KNSTRNQ9Y448 316 aa24.6■■□□□ 1.53
FGFR3-202ENST00000340107 FGD5Q6ZNL6 1462 aa24.6■■□□□ 1.53
FGFR3-202ENST00000340107 CARMIL2Q6F5E8 1435 aa24.6■■□□□ 1.53
FGFR3-202ENST00000340107 DHX57Q6P158 1386 aaKnown RBP24.59■■□□□ 1.53
FGFR3-202ENST00000340107 NCAPD3P42695 1498 aa24.59■■□□□ 1.53
FGFR3-202ENST00000340107 CC2D1BQ5T0F9 858 aaKnown RBP24.56■■□□□ 1.52
FGFR3-202ENST00000340107 L3MBTL2Q969R5 705 aa24.55■■□□□ 1.52
FGFR3-202ENST00000340107 HNRNPMP52272 730 aaKnown RBP eCLIP24.54■■□□□ 1.525e-6■■□□□ 13.2
FGFR3-202ENST00000340107 NUP155O75694 1391 aa24.52■■□□□ 1.52
FGFR3-202ENST00000340107 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.52■■□□□ 1.52
FGFR3-202ENST00000340107 TNNT2P45379 298 aaPredicted RBP24.5■■□□□ 1.51
FGFR3-202ENST00000340107 PLEKHG5O94827 1062 aa24.49■■□□□ 1.51
FGFR3-202ENST00000340107 NEUROD2Q15784 382 aa24.49■■□□□ 1.51
FGFR3-202ENST00000340107 CDCA8Q53HL2 280 aa24.48■■□□□ 1.51
FGFR3-202ENST00000340107 GGT6Q6P531 493 aa24.47■■□□□ 1.51
FGFR3-202ENST00000340107 ARID4BQ4LE39 1312 aaPredicted RBP24.45■■□□□ 1.51
FGFR3-202ENST00000340107 SYNJ1O43426 1573 aa24.45■■□□□ 1.5
FGFR3-202ENST00000340107 PPM1GO15355 546 aaPredicted RBP24.44■■□□□ 1.5
FGFR3-202ENST00000340107 CCER2I3L3R5 266 aa24.41■■□□□ 1.5
FGFR3-202ENST00000340107 KIF21BO75037 1637 aa24.41■■□□□ 1.5
FGFR3-202ENST00000340107 EFCAB2Q5VUJ9 269 aa24.41■■□□□ 1.5
FGFR3-202ENST00000340107 ANKRD30AQ9BXX3 1397 aa24.4■■□□□ 1.5
FGFR3-202ENST00000340107 GAPVD1Q14C86 1478 aa24.39■■□□□ 1.5
FGFR3-202ENST00000340107 TMF1P82094 1093 aa24.38■■□□□ 1.49
FGFR3-202ENST00000340107 NBR1Q14596 966 aa24.38■■□□□ 1.49
FGFR3-202ENST00000340107 MLECQ14165 292 aa24.38■■□□□ 1.49
FGFR3-202ENST00000340107 B4GALNT3Q6L9W6 998 aa24.37■■□□□ 1.49
FGFR3-202ENST00000340107 SAFB2Q14151 953 aaKnown RBP eCLIP24.36■■□□□ 1.49
FGFR3-202ENST00000340107 PHLDB1Q86UU1 1377 aa24.35■■□□□ 1.49
FGFR3-202ENST00000340107 CCDC18Q5T9S5 1454 aa24.34■■□□□ 1.49
FGFR3-202ENST00000340107 CFTRP13569 1480 aa24.34■■□□□ 1.49
FGFR3-202ENST00000340107 POGKQ9P215 609 aa24.34■■□□□ 1.49
FGFR3-202ENST00000340107 ARAP1Q96P48 1450 aa24.33■■□□□ 1.49
FGFR3-202ENST00000340107 NESP48681 1621 aa24.33■■□□□ 1.48
FGFR3-202ENST00000340107 AQRO60306 1485 aaKnown RBP eCLIP24.33■■□□□ 1.482e-7■■■■□ 19.6
FGFR3-202ENST00000340107 ZNF644Q9H582 1327 aaPredicted RBP24.32■■□□□ 1.48
FGFR3-202ENST00000340107 UPF2Q9HAU5 1272 aaKnown RBP24.31■■□□□ 1.48
FGFR3-202ENST00000340107 C14orf37Q86TY3 774 aa24.31■■□□□ 1.48
FGFR3-202ENST00000340107 CFAP53Q96M91 514 aa24.31■■□□□ 1.48
FGFR3-202ENST00000340107 KIF3BO15066 747 aa24.3■■□□□ 1.48
FGFR3-202ENST00000340107 KANK1Q14678 1352 aa24.28■■□□□ 1.48
FGFR3-202ENST00000340107 ZBTB7CA1YPR0 619 aa24.27■■□□□ 1.48
FGFR3-202ENST00000340107 PPP4R2Q9NY27 417 aa24.27■■□□□ 1.48
FGFR3-202ENST00000340107 HSP90AA1P07900 732 aaKnown RBP24.25■■□□□ 1.47
FGFR3-202ENST00000340107 ROCK2O75116 1388 aaKnown RBP24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms