RNA–Protein interactions for RNA: ENST00000340022.6

KRIT1-201, Transcript of KRIT1, ankyrin repeat containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRIT1, Length 4,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRIT1-201ENST00000340022 BECN1Q14457 450 aa15.97■□□□□ 0.15
KRIT1-201ENST00000340022 ARXQ96QS3 562 aa15.94■□□□□ 0.14
KRIT1-201ENST00000340022 SLC24A1O60721 1099 aa15.94■□□□□ 0.14
KRIT1-201ENST00000340022 NOP58Q9Y2X3 529 aaKnown RBP15.93■□□□□ 0.14
KRIT1-201ENST00000340022 ERICH6BQ5W0A0 696 aa15.92■□□□□ 0.14
KRIT1-201ENST00000340022 TSPY4P0CV99 314 aa15.88■□□□□ 0.13
KRIT1-201ENST00000340022 TSPY10P0CW01 314 aa15.88■□□□□ 0.13
KRIT1-201ENST00000340022 KDM2AQ9Y2K7 1162 aa15.88■□□□□ 0.13
KRIT1-201ENST00000340022 TRIM44Q96DX7 344 aaPredicted RBP15.88■□□□□ 0.13
KRIT1-201ENST00000340022 TIMELESSQ9UNS1 1208 aa15.88■□□□□ 0.13
KRIT1-201ENST00000340022 RBM19Q9Y4C8 960 aaKnown RBP15.88■□□□□ 0.13
KRIT1-201ENST00000340022 CCER2I3L3R5 266 aa15.86■□□□□ 0.13
KRIT1-201ENST00000340022 CEP164Q9UPV0 1460 aa15.86■□□□□ 0.13
KRIT1-201ENST00000340022 RRP7BPQ9NSQ0 103 aa15.85■□□□□ 0.13
KRIT1-201ENST00000340022 WRNQ14191 1432 aaPredicted RBP eCLIP15.82■□□□□ 0.12
KRIT1-201ENST00000340022 GOLGA6L22H0YM25 854 aa15.81■□□□□ 0.12
KRIT1-201ENST00000340022 SIN3AQ96ST3 1273 aa15.8■□□□□ 0.12
KRIT1-201ENST00000340022 CHGAP10645 457 aaKnown RBP15.8■□□□□ 0.12
KRIT1-201ENST00000340022 DEKP35659 375 aaKnown RBP15.79■□□□□ 0.12
KRIT1-201ENST00000340022 B4GALNT3Q6L9W6 998 aa15.79■□□□□ 0.12
KRIT1-201ENST00000340022 LAS1LQ9Y4W2 734 aaKnown RBP15.78■□□□□ 0.12
KRIT1-201ENST00000340022 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.78■□□□□ 0.123e-6■■■□□ 18.6
KRIT1-201ENST00000340022 MYH16Q9H6N6 1097 aa15.77■□□□□ 0.11
KRIT1-201ENST00000340022 TSHZ2Q9NRE2 1034 aa15.76■□□□□ 0.11
KRIT1-201ENST00000340022 CCNB3Q8WWL7 1395 aa15.75■□□□□ 0.11
KRIT1-201ENST00000340022 RTN4Q9NQC3 1192 aaKnown RBP15.75■□□□□ 0.11
KRIT1-201ENST00000340022 RB1CC1Q8TDY2 1594 aa15.72■□□□□ 0.11
KRIT1-201ENST00000340022 CDCA8Q53HL2 280 aa15.71■□□□□ 0.1
KRIT1-201ENST00000340022 NCLP19338 710 aaKnown RBP15.7■□□□□ 0.1
KRIT1-201ENST00000340022 CARD11Q9BXL7 1154 aa15.7■□□□□ 0.1
KRIT1-201ENST00000340022 KIF27Q86VH2 1401 aa15.69■□□□□ 0.1
KRIT1-201ENST00000340022 TNNT2P45379 298 aaPredicted RBP15.69■□□□□ 0.1
KRIT1-201ENST00000340022 KNSTRNQ9Y448 316 aa15.68■□□□□ 0.1
KRIT1-201ENST00000340022 NAP1L5Q96NT1 182 aaPredicted RBP15.68■□□□□ 0.1
KRIT1-201ENST00000340022 SENP3-EIF4A1A0A087X0R7 540 aa15.67■□□□□ 0.1
KRIT1-201ENST00000340022 RGS3P49796 1198 aa15.66■□□□□ 0.1
KRIT1-201ENST00000340022 STAG3Q9UJ98 1225 aa15.66■□□□□ 0.1
KRIT1-201ENST00000340022 VPS8Q8N3P4 1428 aa15.63■□□□□ 0.09
KRIT1-201ENST00000340022 CFAP53Q96M91 514 aa15.63■□□□□ 0.09
KRIT1-201ENST00000340022 RGL3Q3MIN7 710 aa15.62■□□□□ 0.09
KRIT1-201ENST00000340022 PTMAP06454 111 aaKnown RBP15.61■□□□□ 0.09
KRIT1-201ENST00000340022 L1TD1Q5T7N2 865 aaKnown RBP15.61■□□□□ 0.09
KRIT1-201ENST00000340022 SETD5Q9C0A6 1442 aa15.6■□□□□ 0.09
KRIT1-201ENST00000340022 FTSJ3Q8IY81 847 aaKnown RBP15.6■□□□□ 0.09
KRIT1-201ENST00000340022 FHAD1B1AJZ9 1412 aa15.59■□□□□ 0.09
KRIT1-201ENST00000340022 SOGA1O94964 1423 aa15.59■□□□□ 0.09
KRIT1-201ENST00000340022 ESF1Q9H501 851 aaKnown RBP15.58■□□□□ 0.09
KRIT1-201ENST00000340022 CFDP1Q9UEE9 299 aaPredicted RBP15.58■□□□□ 0.08
KRIT1-201ENST00000340022 DNTTIP2Q5QJE6 756 aaKnown RBP15.57■□□□□ 0.08
KRIT1-201ENST00000340022 PLEKHD1A6NEE1 506 aa15.57■□□□□ 0.08
KRIT1-201ENST00000340022 TCERG1O14776 1098 aaKnown RBP15.56■□□□□ 0.08
KRIT1-201ENST00000340022 MS4A1P11836 297 aa15.56■□□□□ 0.08
KRIT1-201ENST00000340022 CASC1Q6TDU7 716 aa15.56■□□□□ 0.08
KRIT1-201ENST00000340022 HSPA5P11021 654 aaKnown RBP15.55■□□□□ 0.08
KRIT1-201ENST00000340022 CHMP4BQ9H444 224 aaKnown RBP15.53■□□□□ 0.08
KRIT1-201ENST00000340022 IPO9Q96P70 1041 aaKnown RBP15.53■□□□□ 0.08
KRIT1-201ENST00000340022 FRAT1Q92837 279 aaPredicted RBP15.53■□□□□ 0.08
KRIT1-201ENST00000340022 PPP1R15AO75807 674 aaPredicted RBP15.51■□□□□ 0.07
KRIT1-201ENST00000340022 NPM1P06748 294 aaKnown RBP eCLIP15.51■□□□□ 0.07
KRIT1-201ENST00000340022 CHMP7Q8WUX9 453 aaPredicted RBP15.51■□□□□ 0.07
KRIT1-201ENST00000340022 BAZ1AQ9NRL2 1556 aaPredicted RBP15.5■□□□□ 0.07
KRIT1-201ENST00000340022 NEUROD2Q15784 382 aa15.5■□□□□ 0.07
KRIT1-201ENST00000340022 HSP90AB1P08238 724 aaKnown RBP15.5■□□□□ 0.07
KRIT1-201ENST00000340022 RAB3GAP2Q9H2M9 1393 aa15.49■□□□□ 0.07
KRIT1-201ENST00000340022 CC2D1BQ5T0F9 858 aaKnown RBP15.48■□□□□ 0.07
KRIT1-201ENST00000340022 NUDCQ9Y266 331 aa15.48■□□□□ 0.07
KRIT1-201ENST00000340022 KANK4Q5T7N3 995 aaPredicted RBP15.48■□□□□ 0.07
KRIT1-201ENST00000340022 HSCBQ8IWL3 235 aa15.48■□□□□ 0.07
KRIT1-201ENST00000340022 BAZ1BQ9UIG0 1483 aaKnown RBP15.48■□□□□ 0.07
KRIT1-201ENST00000340022 RCAN3Q9UKA8 241 aa15.48■□□□□ 0.07
KRIT1-201ENST00000340022 MAPK8IP3Q9UPT6 1336 aa15.47■□□□□ 0.07
KRIT1-201ENST00000340022 TMF1P82094 1093 aa15.46■□□□□ 0.07
KRIT1-201ENST00000340022 NACADO15069 1562 aa15.46■□□□□ 0.07
KRIT1-201ENST00000340022 CECR2Q9BXF3 1484 aa15.45■□□□□ 0.06
KRIT1-201ENST00000340022 USP35Q9P2H5 1018 aa15.44■□□□□ 0.06
KRIT1-201ENST00000340022 MSNP26038 577 aaKnown RBP15.44■□□□□ 0.06
KRIT1-201ENST00000340022 ZRSR1Q15695 479 aaKnown RBP15.43■□□□□ 0.06
KRIT1-201ENST00000340022 DCAF11Q8TEB1 546 aa15.42■□□□□ 0.06
KRIT1-201ENST00000340022 PNNQ9H307 717 aaKnown RBP15.42■□□□□ 0.06
KRIT1-201ENST00000340022 RALBP1Q15311 655 aa15.42■□□□□ 0.06
KRIT1-201ENST00000340022 CARMIL1Q5VZK9 1371 aa15.41■□□□□ 0.06
KRIT1-201ENST00000340022 FANCIQ9NVI1 1328 aa15.41■□□□□ 0.06
KRIT1-201ENST00000340022 ARHGAP35Q9NRY4 1499 aa15.4■□□□□ 0.06
KRIT1-201ENST00000340022 KTN1Q86UP2 1357 aaKnown RBP15.4■□□□□ 0.06
KRIT1-201ENST00000340022 CFAP44Q96MT7 982 aa15.39■□□□□ 0.05
KRIT1-201ENST00000340022 PTMSP20962 102 aa15.39■□□□□ 0.05
KRIT1-201ENST00000340022 CCDC88BA6NC98 1476 aa15.38■□□□□ 0.05
KRIT1-201ENST00000340022 PLCB2Q00722 1185 aa15.38■□□□□ 0.05
KRIT1-201ENST00000340022 PDE3BQ13370 1112 aa15.37■□□□□ 0.05
KRIT1-201ENST00000340022 CHAF1AQ13111 956 aaPredicted RBP15.36■□□□□ 0.05
KRIT1-201ENST00000340022 GBP4Q96PP9 640 aa15.36■□□□□ 0.05
KRIT1-201ENST00000340022 KCNH8Q96L42 1107 aa15.35■□□□□ 0.05
KRIT1-201ENST00000340022 DHX57Q6P158 1386 aaKnown RBP15.35■□□□□ 0.05
KRIT1-201ENST00000340022 SLKQ9H2G2 1235 aaPredicted RBP15.34■□□□□ 0.05
KRIT1-201ENST00000340022 MPHOSPH9Q99550 1183 aa15.33■□□□□ 0.04
KRIT1-201ENST00000340022 SPRYD3Q8NCJ5 442 aa15.33■□□□□ 0.04
KRIT1-201ENST00000340022 NRDCO43847 1150 aa15.32■□□□□ 0.04
KRIT1-201ENST00000340022 RWDD1Q9H446 243 aaPredicted RBP15.32■□□□□ 0.04
KRIT1-201ENST00000340022 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.32■□□□□ 0.04
KRIT1-201ENST00000340022 GOLGA6L3A6NEY3 463 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms