RNA–Protein interactions for RNA: ENST00000338748.9

SCNN1A-202, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3

Gene SCNN1A, Length 2,203 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-202ENST00000338748 AQRO60306 1485 aaKnown RBP eCLIP24.76■■□□□ 1.55
SCNN1A-202ENST00000338748 HNRNPUL2Q1KMD3 747 aaKnown RBP24.74■■□□□ 1.55
SCNN1A-202ENST00000338748 PBRM1Q86U86 1689 aa24.74■■□□□ 1.55
SCNN1A-202ENST00000338748 FHOD3Q2V2M9 1422 aa24.74■■□□□ 1.55
SCNN1A-202ENST00000338748 PCF11O94913 1555 aaKnown RBP24.7■■□□□ 1.54
SCNN1A-202ENST00000338748 EFCAB5A4FU69 1503 aa24.7■■□□□ 1.54
SCNN1A-202ENST00000338748 ZNF608Q9ULD9 1512 aaPredicted RBP24.69■■□□□ 1.54
SCNN1A-202ENST00000338748 TIAM1Q13009 1591 aa24.68■■□□□ 1.54
SCNN1A-202ENST00000338748 ERCC6Q03468 1493 aa24.68■■□□□ 1.54
SCNN1A-202ENST00000338748 FHAD1B1AJZ9 1412 aa24.66■■□□□ 1.54
SCNN1A-202ENST00000338748 IFT140Q96RY7 1462 aa24.65■■□□□ 1.54
SCNN1A-202ENST00000338748 ADAMTS12P58397 1594 aa24.64■■□□□ 1.53
SCNN1A-202ENST00000338748 THOC2Q8NI27 1593 aaKnown RBP24.63■■□□□ 1.53
SCNN1A-202ENST00000338748 MAP3K1Q13233 1512 aa24.62■■□□□ 1.53
SCNN1A-202ENST00000338748 GRIN2BQ13224 1484 aa24.6■■□□□ 1.53
SCNN1A-202ENST00000338748 SAMD9Q5K651 1589 aa24.6■■□□□ 1.53
SCNN1A-202ENST00000338748 RRBP1Q9P2E9 1410 aaKnown RBP24.59■■□□□ 1.53
SCNN1A-202ENST00000338748 CFAP43Q8NDM7 1665 aa24.57■■□□□ 1.52
SCNN1A-202ENST00000338748 LRRC9Q6ZRR7 1453 aa24.57■■□□□ 1.52
SCNN1A-202ENST00000338748 FYCO1Q9BQS8 1478 aa24.55■■□□□ 1.52
SCNN1A-202ENST00000338748 CASKIN1Q8WXD9 1431 aa24.54■■□□□ 1.52
SCNN1A-202ENST00000338748 EIF4G3O43432 1585 aaKnown RBP24.53■■□□□ 1.52
SCNN1A-202ENST00000338748 ATP1B4Q9UN42 357 aaPredicted RBP24.53■■□□□ 1.52
SCNN1A-202ENST00000338748 SNAPC4Q5SXM2 1469 aa24.52■■□□□ 1.52
SCNN1A-202ENST00000338748 FMN1Q68DA7 1419 aa24.5■■□□□ 1.51
SCNN1A-202ENST00000338748 CCNB3Q8WWL7 1395 aa24.49■■□□□ 1.51
SCNN1A-202ENST00000338748 IQGAP2Q13576 1575 aa24.46■■□□□ 1.51
SCNN1A-202ENST00000338748 PHLDB1Q86UU1 1377 aa24.46■■□□□ 1.51
SCNN1A-202ENST00000338748 LRRIQ1Q96JM4 1722 aa24.43■■□□□ 1.5
SCNN1A-202ENST00000338748 GRIN2AQ12879 1464 aa24.36■■□□□ 1.49
SCNN1A-202ENST00000338748 ITGAEP38570 1179 aa24.35■■□□□ 1.49
SCNN1A-202ENST00000338748 UGGT2Q9NYU1 1516 aa24.32■■□□□ 1.48
SCNN1A-202ENST00000338748 MAGI1Q96QZ7 1491 aaPredicted RBP24.31■■□□□ 1.48
SCNN1A-202ENST00000338748 KIAA0586Q9BVV6 1533 aa24.29■■□□□ 1.48
SCNN1A-202ENST00000338748 DHX57Q6P158 1386 aaKnown RBP24.27■■□□□ 1.48
SCNN1A-202ENST00000338748 SYNJ2O15056 1496 aa24.26■■□□□ 1.47
SCNN1A-202ENST00000338748 MTUS2Q5JR59 1369 aa24.26■■□□□ 1.47
SCNN1A-202ENST00000338748 CEP170Q5SW79 1584 aa24.25■■□□□ 1.47
SCNN1A-202ENST00000338748 DISP1Q96F81 1524 aa24.25■■□□□ 1.47
SCNN1A-202ENST00000338748 FAM50AQ14320 339 aaKnown RBP24.24■■□□□ 1.47
SCNN1A-202ENST00000338748 MAGI3Q5TCQ9 1506 aa24.23■■□□□ 1.47
SCNN1A-202ENST00000338748 KIAA0556O60303 1618 aa24.23■■□□□ 1.47
SCNN1A-202ENST00000338748 CHMP7Q8WUX9 453 aaPredicted RBP24.21■■□□□ 1.47
SCNN1A-202ENST00000338748 HECW1Q76N89 1606 aa24.21■■□□□ 1.47
SCNN1A-202ENST00000338748 FBLN2P98095 1184 aa24.19■■□□□ 1.46
SCNN1A-202ENST00000338748 NCOA2Q15596 1464 aa24.18■■□□□ 1.46
SCNN1A-202ENST00000338748 CDK13Q14004 1512 aaKnown RBP24.17■■□□□ 1.46
SCNN1A-202ENST00000338748 EHBP1L1Q8N3D4 1523 aa24.17■■□□□ 1.46
SCNN1A-202ENST00000338748 FGD6Q6ZV73 1430 aa24.17■■□□□ 1.46
SCNN1A-202ENST00000338748 CCDC18Q5T9S5 1454 aa24.17■■□□□ 1.46
SCNN1A-202ENST00000338748 EPRSP07814 1512 aaKnown RBP24.17■■□□□ 1.46
SCNN1A-202ENST00000338748 RAB3GAP2Q9H2M9 1393 aa24.16■■□□□ 1.46
SCNN1A-202ENST00000338748 ARID3CA6NKF2 412 aa24.14■■□□□ 1.45
SCNN1A-202ENST00000338748 SUPT6HQ7KZ85 1726 aaKnown RBP24.13■■□□□ 1.45
SCNN1A-202ENST00000338748 NUP160Q12769 1436 aa24.13■■□□□ 1.45
SCNN1A-202ENST00000338748 ARHGEF11O15085 1522 aa24.1■■□□□ 1.45
SCNN1A-202ENST00000338748 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.1■■□□□ 1.45
SCNN1A-202ENST00000338748 MYOM3Q5VTT5 1437 aa24.09■■□□□ 1.45
SCNN1A-202ENST00000338748 SETD5Q9C0A6 1442 aa24.08■■□□□ 1.45
SCNN1A-202ENST00000338748 CLSPNQ9HAW4 1339 aa24.07■■□□□ 1.44
SCNN1A-202ENST00000338748 NUP153P49790 1475 aaKnown RBP24.06■■□□□ 1.44
SCNN1A-202ENST00000338748 RAPGEF6Q8TEU7 1601 aa24.04■■□□□ 1.44
SCNN1A-202ENST00000338748 PTPRKQ15262 1439 aa24.03■■□□□ 1.44
SCNN1A-202ENST00000338748 JPH4Q96JJ6 628 aa24■■□□□ 1.43
SCNN1A-202ENST00000338748 MAPKBP1O60336 1514 aa24■■□□□ 1.43
SCNN1A-202ENST00000338748 PLB1Q6P1J6 1458 aa23.99■■□□□ 1.43
SCNN1A-202ENST00000338748 PTPN23Q9H3S7 1636 aa23.99■■□□□ 1.43
SCNN1A-202ENST00000338748 ZNF316A6NFI3 1004 aaPredicted RBP23.93■■□□□ 1.42
SCNN1A-202ENST00000338748 CARMIL2Q6F5E8 1435 aa23.93■■□□□ 1.42
SCNN1A-202ENST00000338748 CHD1O14646 1710 aa23.91■■□□□ 1.42
SCNN1A-202ENST00000338748 TCOF1Q13428 1488 aaKnown RBP23.9■■□□□ 1.42
SCNN1A-202ENST00000338748 DIEXFQ68CQ4 756 aaKnown RBP23.9■■□□□ 1.42
SCNN1A-202ENST00000338748 HFM1A2PYH4 1435 aa23.88■■□□□ 1.41
SCNN1A-202ENST00000338748 PRG4Q92954 1404 aaPredicted RBP23.85■■□□□ 1.41
SCNN1A-202ENST00000338748 NAIPQ13075 1403 aa23.85■■□□□ 1.41
SCNN1A-202ENST00000338748 MIA2Q96PC5 1412 aa23.84■■□□□ 1.41
SCNN1A-202ENST00000338748 ABCA8O94911 1581 aa23.82■■□□□ 1.4
SCNN1A-202ENST00000338748 TROQ12816 1431 aaPredicted RBP23.8■■□□□ 1.4
SCNN1A-202ENST00000338748 CHIC2Q9UKJ5 165 aa23.78■■□□□ 1.4
SCNN1A-202ENST00000338748 KIF14Q15058 1648 aa23.78■■□□□ 1.4
SCNN1A-202ENST00000338748 CDK11AQ9UQ88 783 aaPredicted RBP23.78■■□□□ 1.4
SCNN1A-202ENST00000338748 SIN3AQ96ST3 1273 aa23.76■■□□□ 1.39
SCNN1A-202ENST00000338748 ZNF644Q9H582 1327 aaPredicted RBP23.75■■□□□ 1.39
SCNN1A-202ENST00000338748 RRP7BPQ9NSQ0 103 aa23.75■■□□□ 1.39
SCNN1A-202ENST00000338748 ATP10BO94823 1461 aa23.72■■□□□ 1.39
SCNN1A-202ENST00000338748 ADCY10Q96PN6 1610 aa23.72■■□□□ 1.39
SCNN1A-202ENST00000338748 UACAQ9BZF9 1416 aa23.72■■□□□ 1.39
SCNN1A-202ENST00000338748 SHROOM2Q13796 1616 aa23.72■■□□□ 1.39
SCNN1A-202ENST00000338748 GCC2Q8IWJ2 1684 aa23.72■■□□□ 1.39
SCNN1A-202ENST00000338748 KDM6BO15054 1643 aa23.71■■□□□ 1.39
SCNN1A-202ENST00000338748 PTPRGP23470 1445 aa23.7■■□□□ 1.38
SCNN1A-202ENST00000338748 ERCC6L2Q5T890 1561 aa23.69■■□□□ 1.38
SCNN1A-202ENST00000338748 NEUROD1Q13562 356 aa23.69■■□□□ 1.38
SCNN1A-202ENST00000338748 DAPK1P53355 1430 aa23.68■■□□□ 1.38
SCNN1A-202ENST00000338748 AKNAQ7Z591 1439 aa23.68■■□□□ 1.38
SCNN1A-202ENST00000338748 GPATCH8Q9UKJ3 1502 aaKnown RBP23.68■■□□□ 1.38
SCNN1A-202ENST00000338748 DNMT1P26358 1616 aaKnown RBP23.67■■□□□ 1.38
SCNN1A-202ENST00000338748 ABCC5O15440 1437 aa23.67■■□□□ 1.38
SCNN1A-202ENST00000338748 ITSN2Q9NZM3 1697 aa23.64■■□□□ 1.38
SCNN1A-202ENST00000338748 CAMSAP2Q08AD1 1489 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms