RNA–Protein interactions for RNA: ENST00000338602.6

SLC28A1-202, Transcript of solute carrier family 28 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC28A1, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-202ENST00000338602 JPH4Q96JJ6 628 aa18.97■□□□□ 0.63
SLC28A1-202ENST00000338602 RAPGEF2Q9Y4G8 1499 aa18.94■□□□□ 0.62
SLC28A1-202ENST00000338602 KIAA0586Q9BVV6 1533 aa18.94■□□□□ 0.62
SLC28A1-202ENST00000338602 CHIC1Q5VXU3 224 aa18.93■□□□□ 0.62
SLC28A1-202ENST00000338602 SHROOM2Q13796 1616 aa18.92■□□□□ 0.62
SLC28A1-202ENST00000338602 PRG4Q92954 1404 aaPredicted RBP18.91■□□□□ 0.62
SLC28A1-202ENST00000338602 EEA1Q15075 1411 aa18.9■□□□□ 0.62
SLC28A1-202ENST00000338602 CSRNP3Q8WYN3 585 aa18.89■□□□□ 0.61
SLC28A1-202ENST00000338602 ERCC6L2Q5T890 1561 aa18.84■□□□□ 0.61
SLC28A1-202ENST00000338602 PRXQ9BXM0 1461 aa18.84■□□□□ 0.61
SLC28A1-202ENST00000338602 IQGAP2Q13576 1575 aa18.81■□□□□ 0.6
SLC28A1-202ENST00000338602 FAM9AQ8IZU1 332 aaPredicted RBP18.81■□□□□ 0.6
SLC28A1-202ENST00000338602 CARMIL2Q6F5E8 1435 aa18.8■□□□□ 0.6
SLC28A1-202ENST00000338602 ILDR1Q86SU0 546 aaPredicted RBP18.79■□□□□ 0.6
SLC28A1-202ENST00000338602 TNIKQ9UKE5 1360 aa18.71■□□□□ 0.59
SLC28A1-202ENST00000338602 PTPRGP23470 1445 aa18.71■□□□□ 0.59
SLC28A1-202ENST00000338602 CTTNBP2Q8WZ74 1663 aa18.7■□□□□ 0.58
SLC28A1-202ENST00000338602 UGGT2Q9NYU1 1516 aa18.7■□□□□ 0.58
SLC28A1-202ENST00000338602 NPM1P06748 294 aaKnown RBP eCLIP18.69■□□□□ 0.58
SLC28A1-202ENST00000338602 TTBK1Q5TCY1 1321 aaPredicted RBP18.68■□□□□ 0.58
SLC28A1-202ENST00000338602 GOLGA3Q08378 1498 aa18.67■□□□□ 0.58
SLC28A1-202ENST00000338602 DISP1Q96F81 1524 aa18.65■□□□□ 0.58
SLC28A1-202ENST00000338602 KIF21BO75037 1637 aa18.63■□□□□ 0.57
SLC28A1-202ENST00000338602 KIAA0556O60303 1618 aa18.61■□□□□ 0.57
SLC28A1-202ENST00000338602 UBTFP17480 764 aaKnown RBP18.59■□□□□ 0.57
SLC28A1-202ENST00000338602 UACAQ9BZF9 1416 aa18.56■□□□□ 0.56
SLC28A1-202ENST00000338602 ADCY10Q96PN6 1610 aa18.55■□□□□ 0.56
SLC28A1-202ENST00000338602 EHMT2Q96KQ7 1210 aa18.55■□□□□ 0.56
SLC28A1-202ENST00000338602 RANGAP1P46060 587 aaPredicted RBP18.53■□□□□ 0.56
SLC28A1-202ENST00000338602 UHRF1BP1LA0JNW5 1464 aa18.52■□□□□ 0.56
SLC28A1-202ENST00000338602 P3H3Q8IVL6 736 aa18.52■□□□□ 0.55
SLC28A1-202ENST00000338602 ABCC2Q92887 1545 aa18.5■□□□□ 0.55
SLC28A1-202ENST00000338602 MAPKBP1O60336 1514 aa18.48■□□□□ 0.55
SLC28A1-202ENST00000338602 SAMD9Q5K651 1589 aa18.46■□□□□ 0.55
SLC28A1-202ENST00000338602 EFCAB5A4FU69 1503 aa18.44■□□□□ 0.54
SLC28A1-202ENST00000338602 PLB1Q6P1J6 1458 aa18.44■□□□□ 0.54
SLC28A1-202ENST00000338602 FAM69CQ0P6D2 419 aa18.43■□□□□ 0.54
SLC28A1-202ENST00000338602 KDM4FA0A1W2PPD8 638 aa18.42■□□□□ 0.54
SLC28A1-202ENST00000338602 KDM5BQ9UGL1 1544 aa18.42■□□□□ 0.54
SLC28A1-202ENST00000338602 ABCC10Q5T3U5 1492 aa18.42■□□□□ 0.54
SLC28A1-202ENST00000338602 ABCA8O94911 1581 aa18.41■□□□□ 0.54
SLC28A1-202ENST00000338602 ASXL2Q76L83 1435 aa18.39■□□□□ 0.54
SLC28A1-202ENST00000338602 FHOD3Q2V2M9 1422 aa18.39■□□□□ 0.53
SLC28A1-202ENST00000338602 ZCCHC11Q5TAX3 1644 aaKnown RBP18.36■□□□□ 0.53
SLC28A1-202ENST00000338602 DIP2BQ9P265 1576 aa18.35■□□□□ 0.53
SLC28A1-202ENST00000338602 KIF13AQ9H1H9 1805 aa18.34■□□□□ 0.53
SLC28A1-202ENST00000338602 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.32■□□□□ 0.52
SLC28A1-202ENST00000338602 HNRNPUL2Q1KMD3 747 aaKnown RBP18.32■□□□□ 0.52
SLC28A1-202ENST00000338602 RAPGEF6Q8TEU7 1601 aa18.31■□□□□ 0.52
SLC28A1-202ENST00000338602 ARID3CA6NKF2 412 aa18.3■□□□□ 0.52
SLC28A1-202ENST00000338602 FMN1Q68DA7 1419 aa18.3■□□□□ 0.52
SLC28A1-202ENST00000338602 ARHGAP35Q9NRY4 1499 aa18.3■□□□□ 0.52
SLC28A1-202ENST00000338602 WDR7Q9Y4E6 1490 aa18.3■□□□□ 0.52
SLC28A1-202ENST00000338602 ATP10BO94823 1461 aa18.28■□□□□ 0.52
SLC28A1-202ENST00000338602 EPRSP07814 1512 aaKnown RBP18.27■□□□□ 0.52
SLC28A1-202ENST00000338602 GLI2P10070 1586 aa18.27■□□□□ 0.52
SLC28A1-202ENST00000338602 KCNH8Q96L42 1107 aa18.27■□□□□ 0.51
SLC28A1-202ENST00000338602 ATP1B4Q9UN42 357 aaPredicted RBP18.26■□□□□ 0.51
SLC28A1-202ENST00000338602 NUP153P49790 1475 aaKnown RBP18.24■□□□□ 0.51
SLC28A1-202ENST00000338602 CLIP1P30622 1438 aa18.23■□□□□ 0.51
SLC28A1-202ENST00000338602 PLEKHD1A6NEE1 506 aa18.22■□□□□ 0.51
SLC28A1-202ENST00000338602 TSPOAP1O95153 1857 aa18.2■□□□□ 0.5
SLC28A1-202ENST00000338602 CDK11AQ9UQ88 783 aaPredicted RBP18.18■□□□□ 0.5
SLC28A1-202ENST00000338602 HECW1Q76N89 1606 aa18.17■□□□□ 0.5
SLC28A1-202ENST00000338602 TEX14Q8IWB6 1497 aa18.17■□□□□ 0.5
SLC28A1-202ENST00000338602 CD109Q6YHK3 1445 aa18.16■□□□□ 0.5
SLC28A1-202ENST00000338602 MAP3K4Q9Y6R4 1608 aa18.15■□□□□ 0.5
SLC28A1-202ENST00000338602 LOC105371045A0A1W2PR82 267 aa18.15■□□□□ 0.5
SLC28A1-202ENST00000338602 KDM6BO15054 1643 aa18.14■□□□□ 0.49
SLC28A1-202ENST00000338602 CFAP43Q8NDM7 1665 aa18.13■□□□□ 0.49
SLC28A1-202ENST00000338602 CEP162Q5TB80 1403 aa18.12■□□□□ 0.49
SLC28A1-202ENST00000338602 CASKIN1Q8WXD9 1431 aa18.12■□□□□ 0.49
SLC28A1-202ENST00000338602 CDK13Q14004 1512 aaKnown RBP18.1■□□□□ 0.49
SLC28A1-202ENST00000338602 MAGI3Q5TCQ9 1506 aa18.1■□□□□ 0.49
SLC28A1-202ENST00000338602 PPRC1Q5VV67 1664 aaKnown RBP18.08■□□□□ 0.48
SLC28A1-202ENST00000338602 CCDC18Q5T9S5 1454 aa18.07■□□□□ 0.48
SLC28A1-202ENST00000338602 FYCO1Q9BQS8 1478 aa18.07■□□□□ 0.48
SLC28A1-202ENST00000338602 ABCA9Q8IUA7 1624 aa18.07■□□□□ 0.48
SLC28A1-202ENST00000338602 FBXO41Q8TF61 875 aa18.06■□□□□ 0.48
SLC28A1-202ENST00000338602 PCF11O94913 1555 aaKnown RBP18.05■□□□□ 0.48
SLC28A1-202ENST00000338602 PHLDB1Q86UU1 1377 aa18.04■□□□□ 0.48
SLC28A1-202ENST00000338602 HECW2Q9P2P5 1572 aa18.03■□□□□ 0.48
SLC28A1-202ENST00000338602 ADGRL1O94910 1474 aa18.02■□□□□ 0.48
SLC28A1-202ENST00000338602 TROQ12816 1431 aaPredicted RBP18.01■□□□□ 0.47
SLC28A1-202ENST00000338602 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.99■□□□□ 0.47
SLC28A1-202ENST00000338602 NEO1Q92859 1461 aa17.98■□□□□ 0.47
SLC28A1-202ENST00000338602 KIF14Q15058 1648 aa17.96■□□□□ 0.47
SLC28A1-202ENST00000338602 LRRIQ1Q96JM4 1722 aa17.95■□□□□ 0.46
SLC28A1-202ENST00000338602 COL17A1Q9UMD9 1497 aaPredicted RBP17.95■□□□□ 0.46
SLC28A1-202ENST00000338602 ARAP3Q8WWN8 1544 aa17.94■□□□□ 0.46
SLC28A1-202ENST00000338602 TTC37Q6PGP7 1564 aa17.93■□□□□ 0.46
SLC28A1-202ENST00000338602 PLCH2O75038 1416 aa17.93■□□□□ 0.46
SLC28A1-202ENST00000338602 CFAP74Q9C0B2 1584 aa17.93■□□□□ 0.46
SLC28A1-202ENST00000338602 EFCAB2Q5VUJ9 269 aa17.92■□□□□ 0.46
SLC28A1-202ENST00000338602 FANCAO15360 1455 aa17.92■□□□□ 0.46
SLC28A1-202ENST00000338602 VPS8Q8N3P4 1428 aa17.92■□□□□ 0.46
SLC28A1-202ENST00000338602 MTUS2Q5JR59 1369 aa17.91■□□□□ 0.46
SLC28A1-202ENST00000338602 AKNAQ7Z591 1439 aa17.9■□□□□ 0.46
SLC28A1-202ENST00000338602 MYO5CQ9NQX4 1742 aa17.87■□□□□ 0.45
SLC28A1-202ENST00000338602 RAPGEF3O95398 923 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms