RNA–Protein interactions for RNA: ENST00000338458.8

ARHGEF3-202, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF3, Length 3,639 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-202ENST00000338458 CCER1Q8TC90 406 aaPredicted RBP15.39■□□□□ 0.05
ARHGEF3-202ENST00000338458 FHOD3Q2V2M9 1422 aa15.38■□□□□ 0.05
ARHGEF3-202ENST00000338458 CUL7Q14999 1698 aa15.37■□□□□ 0.05
ARHGEF3-202ENST00000338458 FBLN2P98095 1184 aa15.37■□□□□ 0.05
ARHGEF3-202ENST00000338458 WDR62O43379 1518 aa15.34■□□□□ 0.05
ARHGEF3-202ENST00000338458 IFT140Q96RY7 1462 aa15.32■□□□□ 0.04
ARHGEF3-202ENST00000338458 ITGAEP38570 1179 aa15.31■□□□□ 0.04
ARHGEF3-202ENST00000338458 PBRM1Q86U86 1689 aa15.29■□□□□ 0.04
ARHGEF3-202ENST00000338458 GRIN2BQ13224 1484 aa15.29■□□□□ 0.04
ARHGEF3-202ENST00000338458 ARID3CA6NKF2 412 aa15.28■□□□□ 0.04
ARHGEF3-202ENST00000338458 CTTNBP2Q8WZ74 1663 aa15.28■□□□□ 0.04
ARHGEF3-202ENST00000338458 FHAD1B1AJZ9 1412 aa15.27■□□□□ 0.04
ARHGEF3-202ENST00000338458 THOC2Q8NI27 1593 aaKnown RBP15.27■□□□□ 0.03
ARHGEF3-202ENST00000338458 ZEB1P37275 1124 aaPredicted RBP15.26■□□□□ 0.03
ARHGEF3-202ENST00000338458 CHMP7Q8WUX9 453 aaPredicted RBP15.25■□□□□ 0.03
ARHGEF3-202ENST00000338458 SNAPC4Q5SXM2 1469 aa15.25■□□□□ 0.03
ARHGEF3-202ENST00000338458 EIF4G3O43432 1585 aaKnown RBP15.23■□□□□ 0.03
ARHGEF3-202ENST00000338458 PCF11O94913 1555 aaKnown RBP15.22■□□□□ 0.03
ARHGEF3-202ENST00000338458 ADAMTS12P58397 1594 aa15.22■□□□□ 0.03
ARHGEF3-202ENST00000338458 EFCAB5A4FU69 1503 aa15.18■□□□□ 0.02
ARHGEF3-202ENST00000338458 TIAM1Q13009 1591 aa15.18■□□□□ 0.02
ARHGEF3-202ENST00000338458 FAM50AQ14320 339 aaKnown RBP15.18■□□□□ 0.02
ARHGEF3-202ENST00000338458 FMN1Q68DA7 1419 aa15.16■□□□□ 0.02
ARHGEF3-202ENST00000338458 LRRC9Q6ZRR7 1453 aa15.15■□□□□ 0.02
ARHGEF3-202ENST00000338458 IQGAP2Q13576 1575 aa15.14■□□□□ 0.01
ARHGEF3-202ENST00000338458 CASKIN1Q8WXD9 1431 aa15.13■□□□□ 0.01
ARHGEF3-202ENST00000338458 GRIN2AQ12879 1464 aa15.13■□□□□ 0.01
ARHGEF3-202ENST00000338458 CCNB3Q8WWL7 1395 aa15.12■□□□□ 0.01
ARHGEF3-202ENST00000338458 PHLDB1Q86UU1 1377 aa15.12■□□□□ 0.01
ARHGEF3-202ENST00000338458 FYCO1Q9BQS8 1478 aa15.11■□□□□ 0.01
ARHGEF3-202ENST00000338458 SAMD9Q5K651 1589 aa15.11■□□□□ 0.01
ARHGEF3-202ENST00000338458 MTUS2Q5JR59 1369 aa15.11■□□□□ 0.01
ARHGEF3-202ENST00000338458 MAGI1Q96QZ7 1491 aaPredicted RBP15.07■□□□□ 0
ARHGEF3-202ENST00000338458 RRBP1Q9P2E9 1410 aaKnown RBP15.07■□□□□ 0
ARHGEF3-202ENST00000338458 SYNJ2O15056 1496 aa15.07■□□□□ 0
ARHGEF3-202ENST00000338458 KIAA0586Q9BVV6 1533 aa15.06■□□□□ 0
ARHGEF3-202ENST00000338458 MAP3K1Q13233 1512 aa15.05■□□□□ -0
ARHGEF3-202ENST00000338458 JPH4Q96JJ6 628 aa15.05■□□□□ -0
ARHGEF3-202ENST00000338458 CFAP43Q8NDM7 1665 aa15.04■□□□□ -0
ARHGEF3-202ENST00000338458 CEP170Q5SW79 1584 aa15.03■□□□□ -0
ARHGEF3-202ENST00000338458 LRRIQ1Q96JM4 1722 aa15.01□□□□□ -0.01
ARHGEF3-202ENST00000338458 CDK13Q14004 1512 aaKnown RBP15□□□□□ -0.01
ARHGEF3-202ENST00000338458 DISP1Q96F81 1524 aa15□□□□□ -0.01
ARHGEF3-202ENST00000338458 UGGT2Q9NYU1 1516 aa14.99□□□□□ -0.01
ARHGEF3-202ENST00000338458 KIAA0556O60303 1618 aa14.97□□□□□ -0.01
ARHGEF3-202ENST00000338458 EPRSP07814 1512 aaKnown RBP14.95□□□□□ -0.02
ARHGEF3-202ENST00000338458 NCOA2Q15596 1464 aa14.95□□□□□ -0.02
ARHGEF3-202ENST00000338458 MAGI3Q5TCQ9 1506 aa14.95□□□□□ -0.02
ARHGEF3-202ENST00000338458 NUP160Q12769 1436 aa14.94□□□□□ -0.02
ARHGEF3-202ENST00000338458 HECW1Q76N89 1606 aa14.94□□□□□ -0.02
ARHGEF3-202ENST00000338458 PLB1Q6P1J6 1458 aa14.93□□□□□ -0.02
ARHGEF3-202ENST00000338458 RAB3GAP2Q9H2M9 1393 aa14.92□□□□□ -0.02
ARHGEF3-202ENST00000338458 CHIC2Q9UKJ5 165 aa14.92□□□□□ -0.02
ARHGEF3-202ENST00000338458 FGD6Q6ZV73 1430 aa14.92□□□□□ -0.02
ARHGEF3-202ENST00000338458 CARMIL2Q6F5E8 1435 aa14.92□□□□□ -0.02
ARHGEF3-202ENST00000338458 DHX57Q6P158 1386 aaKnown RBP14.92□□□□□ -0.02
ARHGEF3-202ENST00000338458 CCDC18Q5T9S5 1454 aa14.9□□□□□ -0.02
ARHGEF3-202ENST00000338458 NUP153P49790 1475 aaKnown RBP14.89□□□□□ -0.03
ARHGEF3-202ENST00000338458 PRG4Q92954 1404 aaPredicted RBP14.89□□□□□ -0.03
ARHGEF3-202ENST00000338458 EHBP1L1Q8N3D4 1523 aa14.88□□□□□ -0.03
ARHGEF3-202ENST00000338458 MYOM3Q5VTT5 1437 aa14.88□□□□□ -0.03
ARHGEF3-202ENST00000338458 CHD1O14646 1710 aa14.88□□□□□ -0.03
ARHGEF3-202ENST00000338458 SUPT6HQ7KZ85 1726 aaKnown RBP14.88□□□□□ -0.03
ARHGEF3-202ENST00000338458 CDK11AQ9UQ88 783 aaPredicted RBP14.87□□□□□ -0.03
ARHGEF3-202ENST00000338458 SETD5Q9C0A6 1442 aa14.87□□□□□ -0.03
ARHGEF3-202ENST00000338458 RAPGEF6Q8TEU7 1601 aa14.86□□□□□ -0.03
ARHGEF3-202ENST00000338458 RRP7BPQ9NSQ0 103 aa14.86□□□□□ -0.03
ARHGEF3-202ENST00000338458 ZNF777Q9ULD5 760 aaPredicted RBP14.86□□□□□ -0.03
ARHGEF3-202ENST00000338458 ZNF644Q9H582 1327 aaPredicted RBP14.84□□□□□ -0.03
ARHGEF3-202ENST00000338458 PTPRKQ15262 1439 aa14.83□□□□□ -0.04
ARHGEF3-202ENST00000338458 NEUROD1Q13562 356 aa14.83□□□□□ -0.04
ARHGEF3-202ENST00000338458 PTPRGP23470 1445 aa14.82□□□□□ -0.04
ARHGEF3-202ENST00000338458 PLEKHD1A6NEE1 506 aa14.8□□□□□ -0.04
ARHGEF3-202ENST00000338458 SIN3AQ96ST3 1273 aa14.79□□□□□ -0.04
ARHGEF3-202ENST00000338458 PTPN23Q9H3S7 1636 aa14.79□□□□□ -0.04
ARHGEF3-202ENST00000338458 ERCC6L2Q5T890 1561 aa14.77□□□□□ -0.05
ARHGEF3-202ENST00000338458 CFDP1Q9UEE9 299 aaPredicted RBP14.77□□□□□ -0.05
ARHGEF3-202ENST00000338458 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.75□□□□□ -0.05
ARHGEF3-202ENST00000338458 ARHGEF11O15085 1522 aa14.75□□□□□ -0.05
ARHGEF3-202ENST00000338458 TRIM52Q96A61 297 aa14.75□□□□□ -0.05
ARHGEF3-202ENST00000338458 TROQ12816 1431 aaPredicted RBP14.74□□□□□ -0.05
ARHGEF3-202ENST00000338458 ZNF316A6NFI3 1004 aaPredicted RBP14.74□□□□□ -0.05
ARHGEF3-202ENST00000338458 ATP10BO94823 1461 aa14.73□□□□□ -0.05
ARHGEF3-202ENST00000338458 DIEXFQ68CQ4 756 aaKnown RBP14.73□□□□□ -0.05
ARHGEF3-202ENST00000338458 KCNH8Q96L42 1107 aa14.73□□□□□ -0.05
ARHGEF3-202ENST00000338458 CLSPNQ9HAW4 1339 aa14.72□□□□□ -0.05
ARHGEF3-202ENST00000338458 KIF14Q15058 1648 aa14.71□□□□□ -0.05
ARHGEF3-202ENST00000338458 ABCA8O94911 1581 aa14.7□□□□□ -0.06
ARHGEF3-202ENST00000338458 NAIPQ13075 1403 aa14.7□□□□□ -0.06
ARHGEF3-202ENST00000338458 MAPKBP1O60336 1514 aa14.69□□□□□ -0.06
ARHGEF3-202ENST00000338458 MIA2Q96PC5 1412 aa14.69□□□□□ -0.06
ARHGEF3-202ENST00000338458 HFM1A2PYH4 1435 aa14.68□□□□□ -0.06
ARHGEF3-202ENST00000338458 UACAQ9BZF9 1416 aa14.67□□□□□ -0.06
ARHGEF3-202ENST00000338458 TCOF1Q13428 1488 aaKnown RBP14.67□□□□□ -0.06
ARHGEF3-202ENST00000338458 GPATCH8Q9UKJ3 1502 aaKnown RBP14.66□□□□□ -0.06
ARHGEF3-202ENST00000338458 FOXD1Q16676 465 aa14.65□□□□□ -0.06
ARHGEF3-202ENST00000338458 DAPK1P53355 1430 aa14.64□□□□□ -0.07
ARHGEF3-202ENST00000338458 HNRNPMP52272 730 aaKnown RBP eCLIP14.64□□□□□ -0.07
ARHGEF3-202ENST00000338458 ABCC5O15440 1437 aa14.63□□□□□ -0.07
ARHGEF3-202ENST00000338458 SHROOM2Q13796 1616 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms