RNA–Protein interactions for RNA: ENST00000338193.10

PRIM1-201, Transcript of DNA primase subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRIM1, Length 1,393 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-201ENST00000338193 CARMIL1Q5VZK9 1371 aa20.97■□□□□ 0.95
PRIM1-201ENST00000338193 GRIN2AQ12879 1464 aa20.97■□□□□ 0.95
PRIM1-201ENST00000338193 CHMP7Q8WUX9 453 aaPredicted RBP20.96■□□□□ 0.95
PRIM1-201ENST00000338193 EEA1Q15075 1411 aa20.95■□□□□ 0.94
PRIM1-201ENST00000338193 CSRNP3Q8WYN3 585 aa20.95■□□□□ 0.94
PRIM1-201ENST00000338193 PRXQ9BXM0 1461 aa20.94■□□□□ 0.94
PRIM1-201ENST00000338193 CEP170Q5SW79 1584 aa20.93■□□□□ 0.94
PRIM1-201ENST00000338193 DCAF8L1A6NGE4 600 aa20.91■□□□□ 0.94
PRIM1-201ENST00000338193 RAPGEF2Q9Y4G8 1499 aa20.88■□□□□ 0.93
PRIM1-201ENST00000338193 NUP160Q12769 1436 aa20.86■□□□□ 0.93
PRIM1-201ENST00000338193 CLASP1Q7Z460 1538 aa20.85■□□□□ 0.93
PRIM1-201ENST00000338193 OSCARQ8IYS5 282 aa20.85■□□□□ 0.93
PRIM1-201ENST00000338193 EHMT2Q96KQ7 1210 aa20.85■□□□□ 0.93
PRIM1-201ENST00000338193 KIF21BO75037 1637 aa20.83■□□□□ 0.93
PRIM1-201ENST00000338193 RNF39Q9H2S5 420 aa20.83■□□□□ 0.92
PRIM1-201ENST00000338193 HOXD11P31277 338 aaPredicted RBP20.82■□□□□ 0.92
PRIM1-201ENST00000338193 CTTNBP2Q8WZ74 1663 aa20.74■□□□□ 0.91
PRIM1-201ENST00000338193 KIAA0586Q9BVV6 1533 aa20.71■□□□□ 0.91
PRIM1-201ENST00000338193 PPP4R3CPQ6ZMV5 832 aa20.71■□□□□ 0.91
PRIM1-201ENST00000338193 GOLGA3Q08378 1498 aa20.7■□□□□ 0.9
PRIM1-201ENST00000338193 ERCC6L2Q5T890 1561 aa20.7■□□□□ 0.9
PRIM1-201ENST00000338193 SHROOM2Q13796 1616 aa20.7■□□□□ 0.9
PRIM1-201ENST00000338193 IQGAP2Q13576 1575 aa20.68■□□□□ 0.9
PRIM1-201ENST00000338193 DNAJC5Q9H3Z4 198 aa20.67■□□□□ 0.9
PRIM1-201ENST00000338193 LOC105371045A0A1W2PR82 267 aa20.64■□□□□ 0.89
PRIM1-201ENST00000338193 RIMBP3CA6NJZ7 1639 aa20.63■□□□□ 0.89
PRIM1-201ENST00000338193 RIMBP3BA6NNM3 1639 aa20.63■□□□□ 0.89
PRIM1-201ENST00000338193 RIMBP3Q9UFD9 1639 aa20.63■□□□□ 0.89
PRIM1-201ENST00000338193 ARHGEF11O15085 1522 aa20.61■□□□□ 0.89
PRIM1-201ENST00000338193 JPH4Q96JJ6 628 aa20.61■□□□□ 0.89
PRIM1-201ENST00000338193 UBTFP17480 764 aaKnown RBP20.59■□□□□ 0.89
PRIM1-201ENST00000338193 PRG4Q92954 1404 aaPredicted RBP20.58■□□□□ 0.89
PRIM1-201ENST00000338193 UGGT2Q9NYU1 1516 aa20.58■□□□□ 0.88
PRIM1-201ENST00000338193 DISP1Q96F81 1524 aa20.56■□□□□ 0.88
PRIM1-201ENST00000338193 RANGAP1P46060 587 aaPredicted RBP20.55■□□□□ 0.88
PRIM1-201ENST00000338193 ARAP1Q96P48 1450 aa20.51■□□□□ 0.87
PRIM1-201ENST00000338193 KIAA0556O60303 1618 aa20.51■□□□□ 0.87
PRIM1-201ENST00000338193 SAMD9Q5K651 1589 aa20.49■□□□□ 0.87
PRIM1-201ENST00000338193 C1QBPQ07021 282 aaKnown RBP20.48■□□□□ 0.87
PRIM1-201ENST00000338193 CNKSR2Q8WXI2 1034 aa20.48■□□□□ 0.87
PRIM1-201ENST00000338193 TNIKQ9UKE5 1360 aa20.48■□□□□ 0.87
PRIM1-201ENST00000338193 RNF216Q9NWF9 866 aaPredicted RBP20.47■□□□□ 0.87
PRIM1-201ENST00000338193 P3H3Q8IVL6 736 aa20.46■□□□□ 0.87
PRIM1-201ENST00000338193 ARHGAP35Q9NRY4 1499 aa20.42■□□□□ 0.86
PRIM1-201ENST00000338193 TTBK1Q5TCY1 1321 aaPredicted RBP20.42■□□□□ 0.86
PRIM1-201ENST00000338193 FHOD3Q2V2M9 1422 aa20.4■□□□□ 0.86
PRIM1-201ENST00000338193 CARMIL2Q6F5E8 1435 aa20.4■□□□□ 0.86
PRIM1-201ENST00000338193 EFCAB5A4FU69 1503 aa20.37■□□□□ 0.85
PRIM1-201ENST00000338193 CYB5RLQ6IPT4 315 aa20.37■□□□□ 0.85
PRIM1-201ENST00000338193 CEP162Q5TB80 1403 aa20.37■□□□□ 0.85
PRIM1-201ENST00000338193 CLIP1P30622 1438 aa20.34■□□□□ 0.85
PRIM1-201ENST00000338193 PTPRGP23470 1445 aa20.34■□□□□ 0.85
PRIM1-201ENST00000338193 PLB1Q6P1J6 1458 aa20.3■□□□□ 0.84
PRIM1-201ENST00000338193 ADCY10Q96PN6 1610 aa20.3■□□□□ 0.84
PRIM1-201ENST00000338193 ABCA8O94911 1581 aa20.27■□□□□ 0.84
PRIM1-201ENST00000338193 UACAQ9BZF9 1416 aa20.22■□□□□ 0.83
PRIM1-201ENST00000338193 RAPGEF6Q8TEU7 1601 aa20.21■□□□□ 0.83
PRIM1-201ENST00000338193 ABCC2Q92887 1545 aa20.21■□□□□ 0.83
PRIM1-201ENST00000338193 PCF11O94913 1555 aaKnown RBP20.19■□□□□ 0.82
PRIM1-201ENST00000338193 LRRIQ1Q96JM4 1722 aa20.18■□□□□ 0.82
PRIM1-201ENST00000338193 UHRF1BP1LA0JNW5 1464 aa20.17■□□□□ 0.82
PRIM1-201ENST00000338193 ARID3CA6NKF2 412 aa20.17■□□□□ 0.82
PRIM1-201ENST00000338193 NUP153P49790 1475 aaKnown RBP20.16■□□□□ 0.82
PRIM1-201ENST00000338193 FMN1Q68DA7 1419 aa20.14■□□□□ 0.82
PRIM1-201ENST00000338193 ZCCHC11Q5TAX3 1644 aaKnown RBP20.14■□□□□ 0.81
PRIM1-201ENST00000338193 KDM5BQ9UGL1 1544 aa20.11■□□□□ 0.81
PRIM1-201ENST00000338193 CDK13Q14004 1512 aaKnown RBP20.1■□□□□ 0.81
PRIM1-201ENST00000338193 ATP10BO94823 1461 aa20.09■□□□□ 0.81
PRIM1-201ENST00000338193 CASKIN1Q8WXD9 1431 aa20.09■□□□□ 0.81
PRIM1-201ENST00000338193 HECW1Q76N89 1606 aa20.08■□□□□ 0.81
PRIM1-201ENST00000338193 VPS8Q8N3P4 1428 aa20.07■□□□□ 0.8
PRIM1-201ENST00000338193 ATP1B4Q9UN42 357 aaPredicted RBP20.07■□□□□ 0.8
PRIM1-201ENST00000338193 FYCO1Q9BQS8 1478 aa20.05■□□□□ 0.8
PRIM1-201ENST00000338193 EPRSP07814 1512 aaKnown RBP20.04■□□□□ 0.8
PRIM1-201ENST00000338193 MAPKBP1O60336 1514 aa20.01■□□□□ 0.79
PRIM1-201ENST00000338193 ASXL2Q76L83 1435 aa19.99■□□□□ 0.79
PRIM1-201ENST00000338193 MAGI3Q5TCQ9 1506 aa19.99■□□□□ 0.79
PRIM1-201ENST00000338193 NPM1P06748 294 aaKnown RBP eCLIP19.97■□□□□ 0.79
PRIM1-201ENST00000338193 CFAP43Q8NDM7 1665 aa19.94■□□□□ 0.78
PRIM1-201ENST00000338193 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.94■□□□□ 0.78
PRIM1-201ENST00000338193 HNRNPUL2Q1KMD3 747 aaKnown RBP19.94■□□□□ 0.78
PRIM1-201ENST00000338193 KIF13AQ9H1H9 1805 aa19.93■□□□□ 0.78
PRIM1-201ENST00000338193 WDR7Q9Y4E6 1490 aa19.93■□□□□ 0.78
PRIM1-201ENST00000338193 DIP2BQ9P265 1576 aa19.92■□□□□ 0.78
PRIM1-201ENST00000338193 CCDC18Q5T9S5 1454 aa19.92■□□□□ 0.78
PRIM1-201ENST00000338193 TIAM1Q13009 1591 aa19.91■□□□□ 0.78
PRIM1-201ENST00000338193 KIF14Q15058 1648 aa19.88■□□□□ 0.77
PRIM1-201ENST00000338193 ABCC10Q5T3U5 1492 aa19.88■□□□□ 0.77
PRIM1-201ENST00000338193 KCNH8Q96L42 1107 aa19.86■□□□□ 0.77
PRIM1-201ENST00000338193 KANK4Q5T7N3 995 aaPredicted RBP19.84■□□□□ 0.77
PRIM1-201ENST00000338193 TROQ12816 1431 aaPredicted RBP19.83■□□□□ 0.76
PRIM1-201ENST00000338193 TTC37Q6PGP7 1564 aa19.82■□□□□ 0.76
PRIM1-201ENST00000338193 PLEKHD1A6NEE1 506 aa19.82■□□□□ 0.76
PRIM1-201ENST00000338193 GLI2P10070 1586 aa19.81■□□□□ 0.76
PRIM1-201ENST00000338193 MAP3K1Q13233 1512 aa19.81■□□□□ 0.76
PRIM1-201ENST00000338193 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.81■□□□□ 0.76
PRIM1-201ENST00000338193 TRHP20396 242 aaPredicted RBP19.81■□□□□ 0.76
PRIM1-201ENST00000338193 FAM69CQ0P6D2 419 aa19.81■□□□□ 0.76
PRIM1-201ENST00000338193 LRRC9Q6ZRR7 1453 aa19.79■□□□□ 0.76
PRIM1-201ENST00000338193 MAP3K4Q9Y6R4 1608 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms