RNA–Protein interactions for RNA: ENST00000337019.7

PACRG-201, Transcript of parkin coregulated, humanhuman

TSL 2 BASIC

Gene PACRG, Length 1,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRG-201ENST00000337019 PRG4Q92954 1404 aaPredicted RBP14.07□□□□□ -0.16
PACRG-201ENST00000337019 KIAA0586Q9BVV6 1533 aa14.06□□□□□ -0.16
PACRG-201ENST00000337019 JPH4Q96JJ6 628 aa14.06□□□□□ -0.16
PACRG-201ENST00000337019 RAPGEF2Q9Y4G8 1499 aa14.05□□□□□ -0.16
PACRG-201ENST00000337019 ERCC6L2Q5T890 1561 aa14.03□□□□□ -0.16
PACRG-201ENST00000337019 IQGAP2Q13576 1575 aa13.99□□□□□ -0.17
PACRG-201ENST00000337019 TRHP20396 242 aaPredicted RBP13.99□□□□□ -0.17
PACRG-201ENST00000337019 EEA1Q15075 1411 aa13.98□□□□□ -0.17
PACRG-201ENST00000337019 CARMIL2Q6F5E8 1435 aa13.98□□□□□ -0.17
PACRG-201ENST00000337019 PRXQ9BXM0 1461 aa13.93□□□□□ -0.18
PACRG-201ENST00000337019 CSRNP3Q8WYN3 585 aa13.93□□□□□ -0.18
PACRG-201ENST00000337019 NPM1P06748 294 aaKnown RBP eCLIP13.91□□□□□ -0.18
PACRG-201ENST00000337019 TTBK1Q5TCY1 1321 aaPredicted RBP13.91□□□□□ -0.18
PACRG-201ENST00000337019 TNIKQ9UKE5 1360 aa13.9□□□□□ -0.18
PACRG-201ENST00000337019 CHIC1Q5VXU3 224 aa13.9□□□□□ -0.19
PACRG-201ENST00000337019 PTPRGP23470 1445 aa13.89□□□□□ -0.19
PACRG-201ENST00000337019 CTTNBP2Q8WZ74 1663 aa13.89□□□□□ -0.19
PACRG-201ENST00000337019 FAM9AQ8IZU1 332 aaPredicted RBP13.89□□□□□ -0.19
PACRG-201ENST00000337019 UGGT2Q9NYU1 1516 aa13.89□□□□□ -0.19
PACRG-201ENST00000337019 GOLGA3Q08378 1498 aa13.87□□□□□ -0.19
PACRG-201ENST00000337019 KIAA0556O60303 1618 aa13.85□□□□□ -0.19
PACRG-201ENST00000337019 DISP1Q96F81 1524 aa13.84□□□□□ -0.19
PACRG-201ENST00000337019 ADCY10Q96PN6 1610 aa13.82□□□□□ -0.2
PACRG-201ENST00000337019 UACAQ9BZF9 1416 aa13.79□□□□□ -0.2
PACRG-201ENST00000337019 KIF21BO75037 1637 aa13.79□□□□□ -0.2
PACRG-201ENST00000337019 MAPKBP1O60336 1514 aa13.78□□□□□ -0.2
PACRG-201ENST00000337019 ABCC2Q92887 1545 aa13.78□□□□□ -0.2
PACRG-201ENST00000337019 UHRF1BP1LA0JNW5 1464 aa13.77□□□□□ -0.21
PACRG-201ENST00000337019 UBTFP17480 764 aaKnown RBP13.73□□□□□ -0.21
PACRG-201ENST00000337019 RANGAP1P46060 587 aaPredicted RBP13.73□□□□□ -0.21
PACRG-201ENST00000337019 ABCC10Q5T3U5 1492 aa13.73□□□□□ -0.21
PACRG-201ENST00000337019 FAM69CQ0P6D2 419 aa13.72□□□□□ -0.21
PACRG-201ENST00000337019 EHMT2Q96KQ7 1210 aa13.72□□□□□ -0.21
PACRG-201ENST00000337019 P3H3Q8IVL6 736 aa13.72□□□□□ -0.21
PACRG-201ENST00000337019 PLB1Q6P1J6 1458 aa13.71□□□□□ -0.21
PACRG-201ENST00000337019 ASXL2Q76L83 1435 aa13.7□□□□□ -0.22
PACRG-201ENST00000337019 SAMD9Q5K651 1589 aa13.69□□□□□ -0.22
PACRG-201ENST00000337019 DIP2BQ9P265 1576 aa13.69□□□□□ -0.22
PACRG-201ENST00000337019 KDM5BQ9UGL1 1544 aa13.69□□□□□ -0.22
PACRG-201ENST00000337019 EFCAB5A4FU69 1503 aa13.68□□□□□ -0.22
PACRG-201ENST00000337019 ABCA8O94911 1581 aa13.67□□□□□ -0.22
PACRG-201ENST00000337019 ZCCHC11Q5TAX3 1644 aaKnown RBP13.67□□□□□ -0.22
PACRG-201ENST00000337019 KIF13AQ9H1H9 1805 aa13.66□□□□□ -0.22
PACRG-201ENST00000337019 FHOD3Q2V2M9 1422 aa13.65□□□□□ -0.22
PACRG-201ENST00000337019 WDR7Q9Y4E6 1490 aa13.63□□□□□ -0.23
PACRG-201ENST00000337019 RAPGEF6Q8TEU7 1601 aa13.62□□□□□ -0.23
PACRG-201ENST00000337019 ARID3CA6NKF2 412 aa13.61□□□□□ -0.23
PACRG-201ENST00000337019 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.61□□□□□ -0.23
PACRG-201ENST00000337019 EPRSP07814 1512 aaKnown RBP13.61□□□□□ -0.23
PACRG-201ENST00000337019 HNRNPUL2Q1KMD3 747 aaKnown RBP13.61□□□□□ -0.23
PACRG-201ENST00000337019 GLI2P10070 1586 aa13.6□□□□□ -0.23
PACRG-201ENST00000337019 FMN1Q68DA7 1419 aa13.57□□□□□ -0.24
PACRG-201ENST00000337019 KCNH8Q96L42 1107 aa13.56□□□□□ -0.24
PACRG-201ENST00000337019 TEX14Q8IWB6 1497 aa13.56□□□□□ -0.24
PACRG-201ENST00000337019 TSPOAP1O95153 1857 aa13.56□□□□□ -0.24
PACRG-201ENST00000337019 ATP10BO94823 1461 aa13.55□□□□□ -0.24
PACRG-201ENST00000337019 ARHGAP35Q9NRY4 1499 aa13.54□□□□□ -0.24
PACRG-201ENST00000337019 KDM6BO15054 1643 aa13.54□□□□□ -0.24
PACRG-201ENST00000337019 NUP153P49790 1475 aaKnown RBP13.54□□□□□ -0.24
PACRG-201ENST00000337019 ATP1B4Q9UN42 357 aaPredicted RBP13.53□□□□□ -0.24
PACRG-201ENST00000337019 MAP3K4Q9Y6R4 1608 aa13.52□□□□□ -0.25
PACRG-201ENST00000337019 HECW1Q76N89 1606 aa13.51□□□□□ -0.25
PACRG-201ENST00000337019 CD109Q6YHK3 1445 aa13.51□□□□□ -0.25
PACRG-201ENST00000337019 CFAP43Q8NDM7 1665 aa13.5□□□□□ -0.25
PACRG-201ENST00000337019 PLEKHD1A6NEE1 506 aa13.5□□□□□ -0.25
PACRG-201ENST00000337019 CLIP1P30622 1438 aa13.49□□□□□ -0.25
PACRG-201ENST00000337019 PPRC1Q5VV67 1664 aaKnown RBP13.47□□□□□ -0.25
PACRG-201ENST00000337019 MAGI3Q5TCQ9 1506 aa13.47□□□□□ -0.25
PACRG-201ENST00000337019 CDK11AQ9UQ88 783 aaPredicted RBP13.46□□□□□ -0.25
PACRG-201ENST00000337019 CDK13Q14004 1512 aaKnown RBP13.45□□□□□ -0.26
PACRG-201ENST00000337019 ABCA9Q8IUA7 1624 aa13.44□□□□□ -0.26
PACRG-201ENST00000337019 CCDC18Q5T9S5 1454 aa13.42□□□□□ -0.26
PACRG-201ENST00000337019 CASKIN1Q8WXD9 1431 aa13.42□□□□□ -0.26
PACRG-201ENST00000337019 PCF11O94913 1555 aaKnown RBP13.41□□□□□ -0.26
PACRG-201ENST00000337019 FYCO1Q9BQS8 1478 aa13.4□□□□□ -0.26
PACRG-201ENST00000337019 CEP162Q5TB80 1403 aa13.4□□□□□ -0.26
PACRG-201ENST00000337019 PHLDB1Q86UU1 1377 aa13.4□□□□□ -0.26
PACRG-201ENST00000337019 NEO1Q92859 1461 aa13.37□□□□□ -0.27
PACRG-201ENST00000337019 KIF14Q15058 1648 aa13.37□□□□□ -0.27
PACRG-201ENST00000337019 TROQ12816 1431 aaPredicted RBP13.37□□□□□ -0.27
PACRG-201ENST00000337019 CFAP74Q9C0B2 1584 aa13.36□□□□□ -0.27
PACRG-201ENST00000337019 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.36□□□□□ -0.27
PACRG-201ENST00000337019 COL17A1Q9UMD9 1497 aaPredicted RBP13.35□□□□□ -0.27
PACRG-201ENST00000337019 TTC37Q6PGP7 1564 aa13.34□□□□□ -0.27
PACRG-201ENST00000337019 ARAP3Q8WWN8 1544 aa13.34□□□□□ -0.27
PACRG-201ENST00000337019 FANCAO15360 1455 aa13.34□□□□□ -0.27
PACRG-201ENST00000337019 LOC105371045A0A1W2PR82 267 aa13.31□□□□□ -0.28
PACRG-201ENST00000337019 AKNAQ7Z591 1439 aa13.3□□□□□ -0.28
PACRG-201ENST00000337019 PLCH2O75038 1416 aa13.3□□□□□ -0.28
PACRG-201ENST00000337019 DENND4BO75064 1496 aaPredicted RBP13.29□□□□□ -0.28
PACRG-201ENST00000337019 LRRIQ1Q96JM4 1722 aa13.29□□□□□ -0.28
PACRG-201ENST00000337019 MYO5CQ9NQX4 1742 aa13.29□□□□□ -0.28
PACRG-201ENST00000337019 MTUS2Q5JR59 1369 aa13.29□□□□□ -0.28
PACRG-201ENST00000337019 ARHGAP5Q13017 1502 aa13.28□□□□□ -0.28
PACRG-201ENST00000337019 EFCAB2Q5VUJ9 269 aa13.28□□□□□ -0.28
PACRG-201ENST00000337019 ADGRL1O94910 1474 aa13.27□□□□□ -0.28
PACRG-201ENST00000337019 RAPGEF3O95398 923 aa13.27□□□□□ -0.29
PACRG-201ENST00000337019 VPS8Q8N3P4 1428 aa13.24□□□□□ -0.29
PACRG-201ENST00000337019 SCAPERQ9BY12 1400 aa13.24□□□□□ -0.29
PACRG-201ENST00000337019 EHBP1L1Q8N3D4 1523 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms