RNA–Protein interactions for RNA: ENST00000336356.3

LRAT-201, Transcript of lecithin retinol acyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRAT, Length 4,928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRAT-201ENST00000336356 GAPVD1Q14C86 1478 aa15.45■□□□□ 0.06
LRAT-201ENST00000336356 JPH4Q96JJ6 628 aa15.44■□□□□ 0.06
LRAT-201ENST00000336356 MIER1Q8N108 512 aa15.43■□□□□ 0.06
LRAT-201ENST00000336356 KCNH8Q96L42 1107 aa15.43■□□□□ 0.06
LRAT-201ENST00000336356 GOLGA3Q08378 1498 aa15.42■□□□□ 0.06
LRAT-201ENST00000336356 ARID4BQ4LE39 1312 aaPredicted RBP15.4■□□□□ 0.06
LRAT-201ENST00000336356 ARID3CA6NKF2 412 aa15.4■□□□□ 0.06
LRAT-201ENST00000336356 FGD5Q6ZNL6 1462 aa15.39■□□□□ 0.05
LRAT-201ENST00000336356 DNMBPQ6XZF7 1577 aa15.38■□□□□ 0.05
LRAT-201ENST00000336356 ZNF777Q9ULD5 760 aaPredicted RBP15.38■□□□□ 0.05
LRAT-201ENST00000336356 DAXXQ9UER7 740 aaPredicted RBP15.37■□□□□ 0.05
LRAT-201ENST00000336356 TSPY4P0CV99 314 aa15.37■□□□□ 0.05
LRAT-201ENST00000336356 TSPY10P0CW01 314 aa15.37■□□□□ 0.05
LRAT-201ENST00000336356 FHAD1B1AJZ9 1412 aa15.37■□□□□ 0.05
LRAT-201ENST00000336356 TOPBP1Q92547 1522 aa15.37■□□□□ 0.05
LRAT-201ENST00000336356 FKBP8Q14318 412 aa15.36■□□□□ 0.05
LRAT-201ENST00000336356 CLIP1P30622 1438 aa15.33■□□□□ 0.04
LRAT-201ENST00000336356 PTPRGP23470 1445 aa15.32■□□□□ 0.04
LRAT-201ENST00000336356 ANP32CO43423 234 aa15.32■□□□□ 0.04
LRAT-201ENST00000336356 MTUS2Q5JR59 1369 aa15.31■□□□□ 0.04
LRAT-201ENST00000336356 FAM50AQ14320 339 aaKnown RBP15.31■□□□□ 0.04
LRAT-201ENST00000336356 STAG3Q9UJ98 1225 aa15.3■□□□□ 0.04
LRAT-201ENST00000336356 AQRO60306 1485 aaKnown RBP eCLIP15.29■□□□□ 0.04
LRAT-201ENST00000336356 RAPGEF2Q9Y4G8 1499 aa15.28■□□□□ 0.04
LRAT-201ENST00000336356 MAGI1Q96QZ7 1491 aaPredicted RBP15.27■□□□□ 0.03
LRAT-201ENST00000336356 ITGAEP38570 1179 aa15.27■□□□□ 0.03
LRAT-201ENST00000336356 SUPT16HQ9Y5B9 1047 aaKnown RBP15.25■□□□□ 0.03
LRAT-201ENST00000336356 RAD54L2Q9Y4B4 1467 aa15.23■□□□□ 0.03
LRAT-201ENST00000336356 SYNJ1O43426 1573 aa15.22■□□□□ 0.03
LRAT-201ENST00000336356 POLA1P09884 1462 aaPredicted RBP15.22■□□□□ 0.03
LRAT-201ENST00000336356 EFCAB2Q5VUJ9 269 aa15.21■□□□□ 0.03
LRAT-201ENST00000336356 ANP32AP39687 249 aaKnown RBP15.2■□□□□ 0.02
LRAT-201ENST00000336356 FMN1Q68DA7 1419 aa15.19■□□□□ 0.02
LRAT-201ENST00000336356 FAM69CQ0P6D2 419 aa15.19■□□□□ 0.02
LRAT-201ENST00000336356 TNIKQ9UKE5 1360 aa15.19■□□□□ 0.02
LRAT-201ENST00000336356 SYNJ2O15056 1496 aa15.19■□□□□ 0.02
LRAT-201ENST00000336356 SNAPC4Q5SXM2 1469 aa15.17■□□□□ 0.02
LRAT-201ENST00000336356 TRIM52Q96A61 297 aa15.17■□□□□ 0.02
LRAT-201ENST00000336356 CFDP1Q9UEE9 299 aaPredicted RBP15.16■□□□□ 0.02
LRAT-201ENST00000336356 DNAJC5Q9H3Z4 198 aa15.16■□□□□ 0.02
LRAT-201ENST00000336356 PLPPR3Q6T4P5 718 aa15.15■□□□□ 0.02
LRAT-201ENST00000336356 WDR62O43379 1518 aa15.12■□□□□ 0.01
LRAT-201ENST00000336356 HDGFP51858 240 aaKnown RBP15.12■□□□□ 0.01
LRAT-201ENST00000336356 PRG4Q92954 1404 aaPredicted RBP15.11■□□□□ 0.01
LRAT-201ENST00000336356 ABCA10Q8WWZ4 1543 aa15.11■□□□□ 0.01
LRAT-201ENST00000336356 URB2Q14146 1524 aaKnown RBP15.1■□□□□ 0.01
LRAT-201ENST00000336356 RSPH4AQ5TD94 716 aa15.09■□□□□ 0.01
LRAT-201ENST00000336356 TSHZ2Q9NRE2 1034 aa15.09■□□□□ 0.01
LRAT-201ENST00000336356 CCNB3Q8WWL7 1395 aa15.08■□□□□ 0
LRAT-201ENST00000336356 IGF1RP08069 1367 aa15.07■□□□□ 0
LRAT-201ENST00000336356 EIF5BO60841 1220 aaKnown RBP15.06■□□□□ 0
LRAT-201ENST00000336356 WDR97A6NE52 1622 aa15.04■□□□□ -0
LRAT-201ENST00000336356 GLIPR1L2Q4G1C9 344 aa15.04■□□□□ -0
LRAT-201ENST00000336356 ERICH3Q5RHP9 1530 aa15.03■□□□□ -0
LRAT-201ENST00000336356 KIAA0586Q9BVV6 1533 aa15.02■□□□□ -0
LRAT-201ENST00000336356 KANK1Q14678 1352 aa15.02■□□□□ -0
LRAT-201ENST00000336356 NBR1Q14596 966 aa15.02□□□□□ -0.01
LRAT-201ENST00000336356 TOP2BQ02880 1626 aa15.01□□□□□ -0.01
LRAT-201ENST00000336356 DDX10Q13206 875 aaKnown RBP15.01□□□□□ -0.01
LRAT-201ENST00000336356 RBM19Q9Y4C8 960 aaKnown RBP15.01□□□□□ -0.01
LRAT-201ENST00000336356 ZBTB47Q9UFB7 747 aaPredicted RBP15□□□□□ -0.01
LRAT-201ENST00000336356 CUX1P39880 1505 aa15□□□□□ -0.01
LRAT-201ENST00000336356 PPP1R15AO75807 674 aaPredicted RBP14.99□□□□□ -0.01
LRAT-201ENST00000336356 HNRNPUQ00839 825 aaKnown RBP eCLIP14.98□□□□□ -0.01
LRAT-201ENST00000336356 GRIN2AQ12879 1464 aa14.98□□□□□ -0.01
LRAT-201ENST00000336356 CHGAP10645 457 aaKnown RBP14.97□□□□□ -0.01
LRAT-201ENST00000336356 CCDC18Q5T9S5 1454 aa14.95□□□□□ -0.02
LRAT-201ENST00000336356 POGZQ7Z3K3 1410 aa14.94□□□□□ -0.02
LRAT-201ENST00000336356 KIF21AQ7Z4S6 1674 aa14.92□□□□□ -0.02
LRAT-201ENST00000336356 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.92□□□□□ -0.02
LRAT-201ENST00000336356 POLR3GLQ9BT43 218 aa14.92□□□□□ -0.02
LRAT-201ENST00000336356 CEP162Q5TB80 1403 aa14.91□□□□□ -0.02
LRAT-201ENST00000336356 CUL7Q14999 1698 aa14.91□□□□□ -0.02
LRAT-201ENST00000336356 DEKP35659 375 aaKnown RBP14.91□□□□□ -0.02
LRAT-201ENST00000336356 MLECQ14165 292 aa14.91□□□□□ -0.02
LRAT-201ENST00000336356 ZNF608Q9ULD9 1512 aaPredicted RBP14.9□□□□□ -0.02
LRAT-201ENST00000336356 UACAQ9BZF9 1416 aa14.89□□□□□ -0.03
LRAT-201ENST00000336356 PLB1Q6P1J6 1458 aa14.88□□□□□ -0.03
LRAT-201ENST00000336356 SPAG9O60271 1321 aaKnown RBP14.87□□□□□ -0.03
LRAT-201ENST00000336356 C14orf37Q86TY3 774 aa14.87□□□□□ -0.03
LRAT-201ENST00000336356 NPM2Q86SE8 214 aaKnown RBP14.86□□□□□ -0.03
LRAT-201ENST00000336356 TEX14Q8IWB6 1497 aa14.85□□□□□ -0.03
LRAT-201ENST00000336356 PHLDB1Q86UU1 1377 aa14.85□□□□□ -0.03
LRAT-201ENST00000336356 NOP58Q9Y2X3 529 aaKnown RBP14.84□□□□□ -0.03
LRAT-201ENST00000336356 CCDC136Q96JN2 1154 aa14.84□□□□□ -0.03
LRAT-201ENST00000336356 CNGB1Q14028 1251 aaPredicted RBP14.83□□□□□ -0.04
LRAT-201ENST00000336356 ZNF326Q5BKZ1 582 aaKnown RBP14.81□□□□□ -0.04
LRAT-201ENST00000336356 ERICH6BQ5W0A0 696 aa14.81□□□□□ -0.04
LRAT-201ENST00000336356 PPP4R2Q9NY27 417 aa14.81□□□□□ -0.04
LRAT-201ENST00000336356 EID1Q9Y6B2 187 aa14.81□□□□□ -0.04
LRAT-201ENST00000336356 SLC4A1APQ9BWU0 796 aaKnown RBP14.8□□□□□ -0.04
LRAT-201ENST00000336356 PRDM2Q13029 1718 aa14.8□□□□□ -0.04
LRAT-201ENST00000336356 IRX6P78412 446 aaPredicted RBP14.8□□□□□ -0.04
LRAT-201ENST00000336356 TONSLQ96HA7 1378 aa14.79□□□□□ -0.04
LRAT-201ENST00000336356 GGT6Q6P531 493 aa14.78□□□□□ -0.04
LRAT-201ENST00000336356 FHOD3Q2V2M9 1422 aa14.78□□□□□ -0.04
LRAT-201ENST00000336356 IQGAP2Q13576 1575 aa14.78□□□□□ -0.04
LRAT-201ENST00000336356 EFCAB5A4FU69 1503 aa14.78□□□□□ -0.04
LRAT-201ENST00000336356 EIF4G3O43432 1585 aaKnown RBP14.77□□□□□ -0.05
LRAT-201ENST00000336356 CHIC2Q9UKJ5 165 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms