RNA–Protein interactions for RNA: ENST00000336053.10

HNRNPC-201, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2 BASIC

Gene HNRNPC, Length 3,301 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-201ENST00000336053 ANP32AP39687 249 aaKnown RBP12.27□□□□□ -0.45
HNRNPC-201ENST00000336053 CNGB1Q14028 1251 aaPredicted RBP12.26□□□□□ -0.45
HNRNPC-201ENST00000336053 GOLGA3Q08378 1498 aa12.25□□□□□ -0.45
HNRNPC-201ENST00000336053 LAS1LQ9Y4W2 734 aaKnown RBP12.24□□□□□ -0.45
HNRNPC-201ENST00000336053 UBE2Q2Q8WVN8 375 aa12.24□□□□□ -0.45
HNRNPC-201ENST00000336053 DHX57Q6P158 1386 aaKnown RBP12.22□□□□□ -0.45
HNRNPC-201ENST00000336053 SYNJ1O43426 1573 aa12.2□□□□□ -0.46
HNRNPC-201ENST00000336053 PPP4R2Q9NY27 417 aa12.2□□□□□ -0.46
HNRNPC-201ENST00000336053 SIN3AQ96ST3 1273 aa12.19□□□□□ -0.46
HNRNPC-201ENST00000336053 BICRAQ9NZM4 1560 aa12.19□□□□□ -0.46
HNRNPC-201ENST00000336053 TIMELESSQ9UNS1 1208 aa12.19□□□□□ -0.46
HNRNPC-201ENST00000336053 SENP3-EIF4A1A0A087X0R7 540 aa12.19□□□□□ -0.46
HNRNPC-201ENST00000336053 NEFMP07197 916 aa12.18□□□□□ -0.46
HNRNPC-201ENST00000336053 FAM9BQ8IZU0 186 aa12.16□□□□□ -0.46
HNRNPC-201ENST00000336053 CEP164Q9UPV0 1460 aa12.15□□□□□ -0.46
HNRNPC-201ENST00000336053 BAZ1BQ9UIG0 1483 aaKnown RBP12.14□□□□□ -0.47
HNRNPC-201ENST00000336053 BRPF3Q9ULD4 1205 aa12.13□□□□□ -0.47
HNRNPC-201ENST00000336053 IPO9Q96P70 1041 aaKnown RBP12.12□□□□□ -0.47
HNRNPC-201ENST00000336053 CCER2I3L3R5 266 aa12.11□□□□□ -0.47
HNRNPC-201ENST00000336053 PKNOX2Q96KN3 472 aa12.11□□□□□ -0.47
HNRNPC-201ENST00000336053 CLIP1P30622 1438 aa12.1□□□□□ -0.47
HNRNPC-201ENST00000336053 VPS8Q8N3P4 1428 aa12.1□□□□□ -0.47
HNRNPC-201ENST00000336053 PPP1R15AO75807 674 aaPredicted RBP12.08□□□□□ -0.48
HNRNPC-201ENST00000336053 KANK4Q5T7N3 995 aaPredicted RBP12.07□□□□□ -0.48
HNRNPC-201ENST00000336053 BIVM-ERCC5R4GMW8 1640 aa12.06□□□□□ -0.48
HNRNPC-201ENST00000336053 TOP2BQ02880 1626 aa12.06□□□□□ -0.48
HNRNPC-201ENST00000336053 FAM50AQ14320 339 aaKnown RBP12.05□□□□□ -0.48
HNRNPC-201ENST00000336053 ATP1B4Q9UN42 357 aaPredicted RBP12.04□□□□□ -0.48
HNRNPC-201ENST00000336053 RAPGEF2Q9Y4G8 1499 aa12.04□□□□□ -0.48
HNRNPC-201ENST00000336053 DAXXQ9UER7 740 aaPredicted RBP12.02□□□□□ -0.49
HNRNPC-201ENST00000336053 VSIG10Q8N0Z9 540 aa12.01□□□□□ -0.49
HNRNPC-201ENST00000336053 ERICH3Q5RHP9 1530 aa12.01□□□□□ -0.49
HNRNPC-201ENST00000336053 ATAD2BQ9ULI0 1458 aa12.01□□□□□ -0.49
HNRNPC-201ENST00000336053 POLR3GLQ9BT43 218 aa11.99□□□□□ -0.49
HNRNPC-201ENST00000336053 MRS2Q9HD23 443 aa11.99□□□□□ -0.49
HNRNPC-201ENST00000336053 ARXQ96QS3 562 aa11.99□□□□□ -0.49
HNRNPC-201ENST00000336053 GLIPR1L2Q4G1C9 344 aa11.98□□□□□ -0.49
HNRNPC-201ENST00000336053 ARAP1Q96P48 1450 aa11.97□□□□□ -0.49
HNRNPC-201ENST00000336053 CUX2O14529 1486 aa11.96□□□□□ -0.49
HNRNPC-201ENST00000336053 PRXQ9BXM0 1461 aa11.96□□□□□ -0.49
HNRNPC-201ENST00000336053 CCDC184Q52MB2 194 aa11.95□□□□□ -0.5
HNRNPC-201ENST00000336053 SLC4A3P48751 1232 aa11.95□□□□□ -0.5
HNRNPC-201ENST00000336053 RAB3GAP2Q9H2M9 1393 aa11.94□□□□□ -0.5
HNRNPC-201ENST00000336053 GSE1Q14687 1217 aa11.93□□□□□ -0.5
HNRNPC-201ENST00000336053 PPM1GO15355 546 aaPredicted RBP11.93□□□□□ -0.5
HNRNPC-201ENST00000336053 RRBP1Q9P2E9 1410 aaKnown RBP11.92□□□□□ -0.5
HNRNPC-201ENST00000336053 PLEKHG5O94827 1062 aa11.91□□□□□ -0.5
HNRNPC-201ENST00000336053 TONSLQ96HA7 1378 aa11.91□□□□□ -0.5
HNRNPC-201ENST00000336053 FRAT1Q92837 279 aaPredicted RBP11.9□□□□□ -0.5
HNRNPC-201ENST00000336053 ARID4BQ4LE39 1312 aaPredicted RBP11.89□□□□□ -0.51
HNRNPC-201ENST00000336053 ZMYND15Q9H091 742 aa11.89□□□□□ -0.51
HNRNPC-201ENST00000336053 WDR97A6NE52 1622 aa11.88□□□□□ -0.51
HNRNPC-201ENST00000336053 RSPH6AQ9H0K4 717 aa11.88□□□□□ -0.51
HNRNPC-201ENST00000336053 CCNB3Q8WWL7 1395 aa11.88□□□□□ -0.51
HNRNPC-201ENST00000336053 USP35Q9P2H5 1018 aa11.88□□□□□ -0.51
HNRNPC-201ENST00000336053 WASHC2AQ641Q2 1341 aa11.88□□□□□ -0.51
HNRNPC-201ENST00000336053 PODXL2Q9NZ53 605 aa11.87□□□□□ -0.51
HNRNPC-201ENST00000336053 NAP1L5Q96NT1 182 aaPredicted RBP11.87□□□□□ -0.51
HNRNPC-201ENST00000336053 CUX1P39880 1505 aa11.85□□□□□ -0.51
HNRNPC-201ENST00000336053 PDE4AP27815 886 aa11.84□□□□□ -0.51
HNRNPC-201ENST00000336053 NFKBIBQ15653 356 aa11.84□□□□□ -0.51
HNRNPC-201ENST00000336053 PRDM2Q13029 1718 aa11.84□□□□□ -0.51
HNRNPC-201ENST00000336053 PABPN1Q86U42 306 aaKnown RBP eCLIP11.84□□□□□ -0.51
HNRNPC-201ENST00000336053 HMGXB3Q12766 1538 aa11.83□□□□□ -0.52
HNRNPC-201ENST00000336053 C11orf95C9JLR9 678 aaPredicted RBP11.82□□□□□ -0.52
HNRNPC-201ENST00000336053 AKNAQ7Z591 1439 aa11.82□□□□□ -0.52
HNRNPC-201ENST00000336053 SKAP1Q86WV1 359 aa11.81□□□□□ -0.52
HNRNPC-201ENST00000336053 WASHC2CQ9Y4E1 1318 aa11.8□□□□□ -0.52
HNRNPC-201ENST00000336053 MAPKBP1O60336 1514 aa11.8□□□□□ -0.52
HNRNPC-201ENST00000336053 ARHGAP35Q9NRY4 1499 aa11.79□□□□□ -0.52
HNRNPC-201ENST00000336053 MAP3K1Q13233 1512 aa11.79□□□□□ -0.52
HNRNPC-201ENST00000336053 A0A0U1RQG5 324 aaPredicted RBP11.79□□□□□ -0.52
HNRNPC-201ENST00000336053 HSPA5P11021 654 aaKnown RBP11.79□□□□□ -0.52
HNRNPC-201ENST00000336053 HSP90AA2PQ14568 343 aaPredicted RBP11.79□□□□□ -0.52
HNRNPC-201ENST00000336053 SETD5Q9C0A6 1442 aa11.78□□□□□ -0.52
HNRNPC-201ENST00000336053 ZBED9Q6R2W3 1325 aa11.77□□□□□ -0.53
HNRNPC-201ENST00000336053 P3H3Q8IVL6 736 aa11.76□□□□□ -0.53
HNRNPC-201ENST00000336053 EXOC6Q8TAG9 804 aa11.76□□□□□ -0.53
HNRNPC-201ENST00000336053 FRAT2O75474 233 aaPredicted RBP11.76□□□□□ -0.53
HNRNPC-201ENST00000336053 DDRGK1Q96HY6 314 aa11.76□□□□□ -0.53
HNRNPC-201ENST00000336053 PRKRIP1Q9H875 184 aaPredicted RBP11.75□□□□□ -0.53
HNRNPC-201ENST00000336053 NCAPD3P42695 1498 aa11.75□□□□□ -0.53
HNRNPC-201ENST00000336053 TCERG1O14776 1098 aaKnown RBP11.75□□□□□ -0.53
HNRNPC-201ENST00000336053 EIF4G2P78344 907 aaKnown RBP eCLIP11.75□□□□□ -0.53
HNRNPC-201ENST00000336053 NUDCQ9Y266 331 aa11.75□□□□□ -0.53
HNRNPC-201ENST00000336053 TIAM1Q13009 1591 aa11.74□□□□□ -0.53
HNRNPC-201ENST00000336053 HSP90AA1P07900 732 aaKnown RBP11.74□□□□□ -0.53
HNRNPC-201ENST00000336053 FAM43AQ8N2R8 423 aa11.74□□□□□ -0.53
HNRNPC-201ENST00000336053 DCAF11Q8TEB1 546 aa11.74□□□□□ -0.53
HNRNPC-201ENST00000336053 CFAP43Q8NDM7 1665 aa11.73□□□□□ -0.53
HNRNPC-201ENST00000336053 CFTRP13569 1480 aa11.73□□□□□ -0.53
HNRNPC-201ENST00000336053 KIF27Q86VH2 1401 aa11.73□□□□□ -0.53
HNRNPC-201ENST00000336053 PNNQ9H307 717 aaKnown RBP11.72□□□□□ -0.53
HNRNPC-201ENST00000336053 BACH2Q9BYV9 841 aa11.71□□□□□ -0.53
HNRNPC-201ENST00000336053 TMC1Q8TDI8 760 aa11.7□□□□□ -0.54
HNRNPC-201ENST00000336053 ZNF326Q5BKZ1 582 aaKnown RBP11.69□□□□□ -0.54
HNRNPC-201ENST00000336053 PLIN1O60240 522 aa11.67□□□□□ -0.54
HNRNPC-201ENST00000336053 RRAGDQ9NQL2 400 aaPredicted RBP11.67□□□□□ -0.54
HNRNPC-201ENST00000336053 GZF1Q9H116 711 aaPredicted RBP11.67□□□□□ -0.54
HNRNPC-201ENST00000336053 RGS3P49796 1198 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms