RNA–Protein interactions for RNA: ENST00000335681.9

NPAS2-201, Transcript of neuronal PAS domain protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPAS2, Length 4,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2-201ENST00000335681 GOLGA3Q08378 1498 aa21.48■■□□□ 1.03
NPAS2-201ENST00000335681 DEKP35659 375 aaKnown RBP21.48■■□□□ 1.03
NPAS2-201ENST00000335681 CHMP7Q8WUX9 453 aaPredicted RBP21.47■■□□□ 1.03
NPAS2-201ENST00000335681 MRS2Q9HD23 443 aa21.43■■□□□ 1.02
NPAS2-201ENST00000335681 CCDC136Q96JN2 1154 aa21.4■■□□□ 1.02
NPAS2-201ENST00000335681 RUSC2Q8N2Y8 1516 aa21.38■■□□□ 1.01
NPAS2-201ENST00000335681 RRP7BPQ9NSQ0 103 aa21.37■■□□□ 1.01
NPAS2-201ENST00000335681 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.35■■□□□ 1.01
NPAS2-201ENST00000335681 MTUS2Q5JR59 1369 aa21.35■■□□□ 1.01
NPAS2-201ENST00000335681 KIF27Q86VH2 1401 aa21.34■■□□□ 1.01
NPAS2-201ENST00000335681 ZBTB47Q9UFB7 747 aaPredicted RBP21.34■■□□□ 1.01
NPAS2-201ENST00000335681 LAS1LQ9Y4W2 734 aaKnown RBP21.31■■□□□ 1
NPAS2-201ENST00000335681 ARXQ96QS3 562 aa21.3■■□□□ 1
NPAS2-201ENST00000335681 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.29■■□□□ 14e-7■■□□□ 11.8
NPAS2-201ENST00000335681 EEA1Q15075 1411 aa21.29■■□□□ 1
NPAS2-201ENST00000335681 CUX2O14529 1486 aa21.28■■□□□ 1
NPAS2-201ENST00000335681 SENP3Q9H4L4 574 aaPredicted RBP21.27■■□□□ 1
NPAS2-201ENST00000335681 CEP164Q9UPV0 1460 aa21.25■□□□□ 0.99
NPAS2-201ENST00000335681 TDRD9Q8NDG6 1382 aaKnown RBP21.25■□□□□ 0.99
NPAS2-201ENST00000335681 ATAD2BQ9ULI0 1458 aa21.22■□□□□ 0.99
NPAS2-201ENST00000335681 NOP58Q9Y2X3 529 aaKnown RBP21.21■□□□□ 0.99
NPAS2-201ENST00000335681 DHX57Q6P158 1386 aaKnown RBP21.21■□□□□ 0.99
NPAS2-201ENST00000335681 CARMIL1Q5VZK9 1371 aa21.2■□□□□ 0.98
NPAS2-201ENST00000335681 VPS8Q8N3P4 1428 aa21.19■□□□□ 0.98
NPAS2-201ENST00000335681 PLPPR3Q6T4P5 718 aa21.19■□□□□ 0.98
NPAS2-201ENST00000335681 CCNB3Q8WWL7 1395 aa21.18■□□□□ 0.98
NPAS2-201ENST00000335681 KDM2AQ9Y2K7 1162 aa21.16■□□□□ 0.98
NPAS2-201ENST00000335681 TOP2AP11388 1531 aaKnown RBP21.16■□□□□ 0.98
NPAS2-201ENST00000335681 PPP4R2Q9NY27 417 aa21.16■□□□□ 0.98
NPAS2-201ENST00000335681 SMARCA4P51532 1647 aa21.15■□□□□ 0.98
NPAS2-201ENST00000335681 TMC1Q8TDI8 760 aa21.13■□□□□ 0.97
NPAS2-201ENST00000335681 EIF4G2P78344 907 aaKnown RBP eCLIP21.13■□□□□ 0.97
NPAS2-201ENST00000335681 CHGAP10645 457 aaKnown RBP21.13■□□□□ 0.97
NPAS2-201ENST00000335681 MSH5O43196 834 aa21.12■□□□□ 0.97
NPAS2-201ENST00000335681 ANO8Q9HCE9 1232 aaPredicted RBP21.12■□□□□ 0.97
NPAS2-201ENST00000335681 RAB3GAP2Q9H2M9 1393 aa21.11■□□□□ 0.97
NPAS2-201ENST00000335681 ERCC6Q03468 1493 aa21.09■□□□□ 0.97
NPAS2-201ENST00000335681 SMARCA2P51531 1590 aa21.08■□□□□ 0.97
NPAS2-201ENST00000335681 NEFMP07197 916 aa21.07■□□□□ 0.96
NPAS2-201ENST00000335681 TSPY4P0CV99 314 aa21.05■□□□□ 0.96
NPAS2-201ENST00000335681 TSPY10P0CW01 314 aa21.05■□□□□ 0.96
NPAS2-201ENST00000335681 RAPGEF2Q9Y4G8 1499 aa21.04■□□□□ 0.96
NPAS2-201ENST00000335681 CCER2I3L3R5 266 aa21.03■□□□□ 0.96
NPAS2-201ENST00000335681 PRKCSHP14314 528 aaPredicted RBP21.02■□□□□ 0.96
NPAS2-201ENST00000335681 CADPSQ9ULU8 1353 aa21.01■□□□□ 0.95
NPAS2-201ENST00000335681 FOXD1Q16676 465 aa21.01■□□□□ 0.95
NPAS2-201ENST00000335681 PPP1R15AO75807 674 aaPredicted RBP21■□□□□ 0.95
NPAS2-201ENST00000335681 PLEKHD1A6NEE1 506 aa21■□□□□ 0.95
NPAS2-201ENST00000335681 EIF4G1Q04637 1599 aaKnown RBP20.99■□□□□ 0.95
NPAS2-201ENST00000335681 NPM1P06748 294 aaKnown RBP eCLIP20.99■□□□□ 0.95
NPAS2-201ENST00000335681 RGL3Q3MIN7 710 aa20.99■□□□□ 0.95
NPAS2-201ENST00000335681 CFDP1Q9UEE9 299 aaPredicted RBP20.98■□□□□ 0.95
NPAS2-201ENST00000335681 HSPA5P11021 654 aaKnown RBP20.96■□□□□ 0.95
NPAS2-201ENST00000335681 DNAJC5BQ9UF47 199 aa20.96■□□□□ 0.95
NPAS2-201ENST00000335681 PAK3O75914 559 aaPredicted RBP20.92■□□□□ 0.94
NPAS2-201ENST00000335681 SETD5Q9C0A6 1442 aa20.91■□□□□ 0.94
NPAS2-201ENST00000335681 IL27Q8NEV9 243 aa20.89■□□□□ 0.93
NPAS2-201ENST00000335681 CANXP27824 592 aaKnown RBP20.87■□□□□ 0.93
NPAS2-201ENST00000335681 FHOD3Q2V2M9 1422 aa20.84■□□□□ 0.93
NPAS2-201ENST00000335681 FANCIQ9NVI1 1328 aa20.83■□□□□ 0.92
NPAS2-201ENST00000335681 PDS5BQ9NTI5 1447 aa20.8■□□□□ 0.92
NPAS2-201ENST00000335681 SLC4A3P48751 1232 aa20.78■□□□□ 0.92
NPAS2-201ENST00000335681 RGS3P49796 1198 aa20.76■□□□□ 0.91
NPAS2-201ENST00000335681 RAD54L2Q9Y4B4 1467 aa20.76■□□□□ 0.91
NPAS2-201ENST00000335681 FANCD2Q9BXW9 1451 aa20.76■□□□□ 0.91
NPAS2-201ENST00000335681 STAG3Q9UJ98 1225 aa20.75■□□□□ 0.91
NPAS2-201ENST00000335681 IPO9Q96P70 1041 aaKnown RBP20.75■□□□□ 0.91
NPAS2-201ENST00000335681 ARID4BQ4LE39 1312 aaPredicted RBP20.72■□□□□ 0.91
NPAS2-201ENST00000335681 FHAD1B1AJZ9 1412 aa20.72■□□□□ 0.91
NPAS2-201ENST00000335681 TIMELESSQ9UNS1 1208 aa20.71■□□□□ 0.91
NPAS2-201ENST00000335681 CCDC184Q52MB2 194 aa20.7■□□□□ 0.9
NPAS2-201ENST00000335681 NESP48681 1621 aa20.69■□□□□ 0.9
NPAS2-201ENST00000335681 L3MBTL2Q969R5 705 aa20.69■□□□□ 0.9
NPAS2-201ENST00000335681 ESF1Q9H501 851 aaKnown RBP20.69■□□□□ 0.9
NPAS2-201ENST00000335681 IGF1RP08069 1367 aa20.68■□□□□ 0.9
NPAS2-201ENST00000335681 SLC24A1O60721 1099 aa20.64■□□□□ 0.89
NPAS2-201ENST00000335681 CARD11Q9BXL7 1154 aa20.64■□□□□ 0.89
NPAS2-201ENST00000335681 FGD5Q6ZNL6 1462 aa20.63■□□□□ 0.89
NPAS2-201ENST00000335681 PPM1GO15355 546 aaPredicted RBP20.63■□□□□ 0.89
NPAS2-201ENST00000335681 CC2D1BQ5T0F9 858 aaKnown RBP20.63■□□□□ 0.89
NPAS2-201ENST00000335681 PRKRIP1Q9H875 184 aaPredicted RBP20.62■□□□□ 0.89
NPAS2-201ENST00000335681 PLEKHG5O94827 1062 aa20.61■□□□□ 0.89
NPAS2-201ENST00000335681 NCAPD3P42695 1498 aa20.6■□□□□ 0.89
NPAS2-201ENST00000335681 JPH4Q96JJ6 628 aa20.6■□□□□ 0.89
NPAS2-201ENST00000335681 BRPF3Q9ULD4 1205 aa20.58■□□□□ 0.89
NPAS2-201ENST00000335681 PLIN1O60240 522 aa20.57■□□□□ 0.88
NPAS2-201ENST00000335681 KIF21BO75037 1637 aa20.57■□□□□ 0.88
NPAS2-201ENST00000335681 SYNJ1O43426 1573 aa20.57■□□□□ 0.88
NPAS2-201ENST00000335681 WDR43Q15061 677 aaKnown RBP eCLIP20.56■□□□□ 0.88
NPAS2-201ENST00000335681 ERICH6BQ5W0A0 696 aa20.56■□□□□ 0.88
NPAS2-201ENST00000335681 NUDCQ9Y266 331 aa20.56■□□□□ 0.88
NPAS2-201ENST00000335681 SPRYD3Q8NCJ5 442 aa20.55■□□□□ 0.88
NPAS2-201ENST00000335681 DDRGK1Q96HY6 314 aa20.55■□□□□ 0.88
NPAS2-201ENST00000335681 MPHOSPH9Q99550 1183 aa20.55■□□□□ 0.88
NPAS2-201ENST00000335681 EXOC6Q8TAG9 804 aa20.55■□□□□ 0.88
NPAS2-201ENST00000335681 NAP1L5Q96NT1 182 aaPredicted RBP20.55■□□□□ 0.88
NPAS2-201ENST00000335681 HNRNPMP52272 730 aaKnown RBP eCLIP20.54■□□□□ 0.884e-7■■■□□ 17.3
NPAS2-201ENST00000335681 DCAF11Q8TEB1 546 aa20.54■□□□□ 0.88
NPAS2-201ENST00000335681 ARHGAP35Q9NRY4 1499 aa20.54■□□□□ 0.88
NPAS2-201ENST00000335681 AQRO60306 1485 aaKnown RBP eCLIP20.54■□□□□ 0.882e-6■■■■□ 21
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms