RNA–Protein interactions for RNA: ENST00000335387.9

RC3H2-201, Transcript of ring finger and CCCH-type domains 2, humanhuman

TSL 1 (best) BASIC

Gene RC3H2, Length 3,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2-201ENST00000335387 MRC2Q9UBG0 1479 aa19.96■□□□□ 0.79
RC3H2-201ENST00000335387 AQRO60306 1485 aaKnown RBP eCLIP19.93■□□□□ 0.782e-6■■■■■ 34.3
RC3H2-201ENST00000335387 FANCD2Q9BXW9 1451 aa19.93■□□□□ 0.78
RC3H2-201ENST00000335387 KANK4Q5T7N3 995 aaPredicted RBP19.91■□□□□ 0.78
RC3H2-201ENST00000335387 HNRNPUL2Q1KMD3 747 aaKnown RBP19.91■□□□□ 0.78
RC3H2-201ENST00000335387 CARMIL1Q5VZK9 1371 aa19.9■□□□□ 0.78
RC3H2-201ENST00000335387 CCNB3Q8WWL7 1395 aa19.9■□□□□ 0.78
RC3H2-201ENST00000335387 NEUROD1Q13562 356 aa19.9■□□□□ 0.78
RC3H2-201ENST00000335387 CENPBP07199 599 aaPredicted RBP19.89■□□□□ 0.77
RC3H2-201ENST00000335387 DNAJC5Q9H3Z4 198 aa19.89■□□□□ 0.77
RC3H2-201ENST00000335387 LRRC9Q6ZRR7 1453 aa19.88■□□□□ 0.77
RC3H2-201ENST00000335387 TOPBP1Q92547 1522 aa19.88■□□□□ 0.77
RC3H2-201ENST00000335387 FHAD1B1AJZ9 1412 aa19.87■□□□□ 0.77
RC3H2-201ENST00000335387 PCF11O94913 1555 aaKnown RBP19.86■□□□□ 0.77
RC3H2-201ENST00000335387 FYCO1Q9BQS8 1478 aa19.85■□□□□ 0.77
RC3H2-201ENST00000335387 ABCA5Q8WWZ7 1642 aa19.85■□□□□ 0.77
RC3H2-201ENST00000335387 POLA1P09884 1462 aaPredicted RBP19.84■□□□□ 0.77
RC3H2-201ENST00000335387 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.83■□□□□ 0.77
RC3H2-201ENST00000335387 SAMD9Q5K651 1589 aa19.81■□□□□ 0.76
RC3H2-201ENST00000335387 MAPKBP1O60336 1514 aa19.8■□□□□ 0.76
RC3H2-201ENST00000335387 CASKIN1Q8WXD9 1431 aa19.77■□□□□ 0.75
RC3H2-201ENST00000335387 SNAPC4Q5SXM2 1469 aa19.72■□□□□ 0.75
RC3H2-201ENST00000335387 LRRIQ1Q96JM4 1722 aa19.7■□□□□ 0.74
RC3H2-201ENST00000335387 URB2Q14146 1524 aaKnown RBP19.7■□□□□ 0.74
RC3H2-201ENST00000335387 RAD54L2Q9Y4B4 1467 aa19.69■□□□□ 0.74
RC3H2-201ENST00000335387 PHLDB1Q86UU1 1377 aa19.68■□□□□ 0.74
RC3H2-201ENST00000335387 SETD5Q9C0A6 1442 aa19.67■□□□□ 0.74
RC3H2-201ENST00000335387 MIER1Q8N108 512 aa19.66■□□□□ 0.74
RC3H2-201ENST00000335387 RAB3GAP2Q9H2M9 1393 aa19.66■□□□□ 0.74
RC3H2-201ENST00000335387 RANGAP1P46060 587 aaPredicted RBP19.64■□□□□ 0.73
RC3H2-201ENST00000335387 TARBP1Q13395 1621 aaKnown RBP19.64■□□□□ 0.73
RC3H2-201ENST00000335387 GTF3C3Q9Y5Q9 886 aa19.64■□□□□ 0.73
RC3H2-201ENST00000335387 FMN1Q68DA7 1419 aa19.63■□□□□ 0.73
RC3H2-201ENST00000335387 ARHGEF11O15085 1522 aa19.6■□□□□ 0.73
RC3H2-201ENST00000335387 GRIN2BQ13224 1484 aa19.59■□□□□ 0.73
RC3H2-201ENST00000335387 TIMELESSQ9UNS1 1208 aa19.57■□□□□ 0.72
RC3H2-201ENST00000335387 FHOD3Q2V2M9 1422 aa19.57■□□□□ 0.72
RC3H2-201ENST00000335387 IFT140Q96RY7 1462 aa19.57■□□□□ 0.72
RC3H2-201ENST00000335387 PBRM1Q86U86 1689 aa19.56■□□□□ 0.72
RC3H2-201ENST00000335387 SUPT6HQ7KZ85 1726 aaKnown RBP19.53■□□□□ 0.72
RC3H2-201ENST00000335387 EHBP1L1Q8N3D4 1523 aa19.53■□□□□ 0.72
RC3H2-201ENST00000335387 GAPVD1Q14C86 1478 aa19.52■□□□□ 0.72
RC3H2-201ENST00000335387 FGD6Q6ZV73 1430 aa19.51■□□□□ 0.71
RC3H2-201ENST00000335387 PTPN23Q9H3S7 1636 aa19.48■□□□□ 0.71
RC3H2-201ENST00000335387 UGGT2Q9NYU1 1516 aa19.48■□□□□ 0.71
RC3H2-201ENST00000335387 GCC2Q8IWJ2 1684 aa19.47■□□□□ 0.71
RC3H2-201ENST00000335387 HFM1A2PYH4 1435 aa19.47■□□□□ 0.71
RC3H2-201ENST00000335387 TCOF1Q13428 1488 aaKnown RBP19.46■□□□□ 0.71
RC3H2-201ENST00000335387 CCDC18Q5T9S5 1454 aa19.46■□□□□ 0.71
RC3H2-201ENST00000335387 ADAMTS12P58397 1594 aa19.46■□□□□ 0.71
RC3H2-201ENST00000335387 HECW1Q76N89 1606 aa19.43■□□□□ 0.7
RC3H2-201ENST00000335387 AKNAQ7Z591 1439 aa19.42■□□□□ 0.7
RC3H2-201ENST00000335387 MYOM3Q5VTT5 1437 aa19.41■□□□□ 0.7
RC3H2-201ENST00000335387 NCOA2Q15596 1464 aa19.4■□□□□ 0.7
RC3H2-201ENST00000335387 UACAQ9BZF9 1416 aa19.38■□□□□ 0.69
RC3H2-201ENST00000335387 IQGAP2Q13576 1575 aa19.38■□□□□ 0.69
RC3H2-201ENST00000335387 MAGI3Q5TCQ9 1506 aa19.37■□□□□ 0.69
RC3H2-201ENST00000335387 KDM5BQ9UGL1 1544 aa19.36■□□□□ 0.69
RC3H2-201ENST00000335387 PTPRKQ15262 1439 aa19.35■□□□□ 0.69
RC3H2-201ENST00000335387 NAIPQ13075 1403 aa19.33■□□□□ 0.69
RC3H2-201ENST00000335387 TDRD9Q8NDG6 1382 aaKnown RBP19.3■□□□□ 0.68
RC3H2-201ENST00000335387 EIF4G3O43432 1585 aaKnown RBP19.28■□□□□ 0.68
RC3H2-201ENST00000335387 YTHDC1Q96MU7 727 aaKnown RBP19.28■□□□□ 0.68
RC3H2-201ENST00000335387 MIA2Q96PC5 1412 aa19.28■□□□□ 0.68
RC3H2-201ENST00000335387 MTUS2Q5JR59 1369 aa19.28■□□□□ 0.68
RC3H2-201ENST00000335387 EPRSP07814 1512 aaKnown RBP19.26■□□□□ 0.67
RC3H2-201ENST00000335387 FAM50AQ14320 339 aaKnown RBP19.25■□□□□ 0.67
RC3H2-201ENST00000335387 PPP1R15AO75807 674 aaPredicted RBP19.25■□□□□ 0.67
RC3H2-201ENST00000335387 P3H3Q8IVL6 736 aa19.24■□□□□ 0.67
RC3H2-201ENST00000335387 OSCARQ8IYS5 282 aa19.24■□□□□ 0.67
RC3H2-201ENST00000335387 ITGAEP38570 1179 aa19.23■□□□□ 0.67
RC3H2-201ENST00000335387 DENND4BO75064 1496 aaPredicted RBP19.22■□□□□ 0.67
RC3H2-201ENST00000335387 KIAA0556O60303 1618 aa19.22■□□□□ 0.67
RC3H2-201ENST00000335387 DNMT1P26358 1616 aaKnown RBP19.18■□□□□ 0.66
RC3H2-201ENST00000335387 ADCY10Q96PN6 1610 aa19.18■□□□□ 0.66
RC3H2-201ENST00000335387 ZNF608Q9ULD9 1512 aaPredicted RBP19.18■□□□□ 0.66
RC3H2-201ENST00000335387 SIN3AQ96ST3 1273 aa19.17■□□□□ 0.66
RC3H2-201ENST00000335387 MAGI1Q96QZ7 1491 aaPredicted RBP19.16■□□□□ 0.66
RC3H2-201ENST00000335387 DISP1Q96F81 1524 aa19.16■□□□□ 0.66
RC3H2-201ENST00000335387 KIAA0586Q9BVV6 1533 aa19.16■□□□□ 0.66
RC3H2-201ENST00000335387 POLR1AO95602 1720 aaPredicted RBP19.15■□□□□ 0.66
RC3H2-201ENST00000335387 ROCK1Q13464 1354 aa19.14■□□□□ 0.66
RC3H2-201ENST00000335387 CCER2I3L3R5 266 aa19.14■□□□□ 0.65
RC3H2-201ENST00000335387 KDM6BO15054 1643 aa19.14■□□□□ 0.65
RC3H2-201ENST00000335387 RAPGEF6Q8TEU7 1601 aa19.14■□□□□ 0.65
RC3H2-201ENST00000335387 CROCC2H7BZ55 1655 aa19.1■□□□□ 0.65
RC3H2-201ENST00000335387 ADGBQ8N7X0 1667 aa19.1■□□□□ 0.65
RC3H2-201ENST00000335387 CDK13Q14004 1512 aaKnown RBP19.1■□□□□ 0.65
RC3H2-201ENST00000335387 CHD1O14646 1710 aa19.09■□□□□ 0.65
RC3H2-201ENST00000335387 ITSN2Q9NZM3 1697 aa19.09■□□□□ 0.65
RC3H2-201ENST00000335387 SUPT16HQ9Y5B9 1047 aaKnown RBP19.09■□□□□ 0.65
RC3H2-201ENST00000335387 TONSLQ96HA7 1378 aa19.07■□□□□ 0.64
RC3H2-201ENST00000335387 NUP153P49790 1475 aaKnown RBP19.06■□□□□ 0.64
RC3H2-201ENST00000335387 GRIN2AQ12879 1464 aa19.06■□□□□ 0.64
RC3H2-201ENST00000335387 ATP1B4Q9UN42 357 aaPredicted RBP19.03■□□□□ 0.64
RC3H2-201ENST00000335387 DAPK1P53355 1430 aa19.03■□□□□ 0.64
RC3H2-201ENST00000335387 RIMBP3CA6NJZ7 1639 aa19.03■□□□□ 0.64
RC3H2-201ENST00000335387 RIMBP3BA6NNM3 1639 aa19.03■□□□□ 0.64
RC3H2-201ENST00000335387 RIMBP3Q9UFD9 1639 aa19.03■□□□□ 0.64
RC3H2-201ENST00000335387 MYT1Q01538 1121 aa19.02■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms