RNA–Protein interactions for RNA: ENST00000335005.10

ITM2C-203, Transcript of integral membrane protein 2C, humanhuman

TSL 1 (best) BASIC

Gene ITM2C, Length 1,889 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-203ENST00000335005 PCF11O94913 1555 aaKnown RBP35.09■■■■□ 3.21
ITM2C-203ENST00000335005 DNAJC5BQ9UF47 199 aa35.07■■■■□ 3.2
ITM2C-203ENST00000335005 TARBP1Q13395 1621 aaKnown RBP35.06■■■■□ 3.2
ITM2C-203ENST00000335005 GAPVD1Q14C86 1478 aa35.06■■■■□ 3.2
ITM2C-203ENST00000335005 CCNB3Q8WWL7 1395 aa35.05■■■■□ 3.2
ITM2C-203ENST00000335005 AQRO60306 1485 aaKnown RBP eCLIP35.05■■■■□ 3.21e-8■■■□□ 18.9
ITM2C-203ENST00000335005 LRRC9Q6ZRR7 1453 aa35.04■■■■□ 3.2
ITM2C-203ENST00000335005 FYCO1Q9BQS8 1478 aa35.02■■■■□ 3.2
ITM2C-203ENST00000335005 CLSPNQ9HAW4 1339 aa35.01■■■■□ 3.2
ITM2C-203ENST00000335005 TDRD9Q8NDG6 1382 aaKnown RBP34.95■■■■□ 3.19
ITM2C-203ENST00000335005 SAMD9Q5K651 1589 aa34.94■■■■□ 3.18
ITM2C-203ENST00000335005 FHOD3Q2V2M9 1422 aa34.94■■■■□ 3.18
ITM2C-203ENST00000335005 CASKIN1Q8WXD9 1431 aa34.94■■■■□ 3.18
ITM2C-203ENST00000335005 DHX57Q6P158 1386 aaKnown RBP34.91■■■■□ 3.18
ITM2C-203ENST00000335005 PBRM1Q86U86 1689 aa34.88■■■■□ 3.17
ITM2C-203ENST00000335005 FMN1Q68DA7 1419 aa34.86■■■■□ 3.17
ITM2C-203ENST00000335005 MRC2Q9UBG0 1479 aa34.86■■■■□ 3.17
ITM2C-203ENST00000335005 ZNF316A6NFI3 1004 aaPredicted RBP34.82■■■■□ 3.17
ITM2C-203ENST00000335005 DIEXFQ68CQ4 756 aaKnown RBP34.82■■■■□ 3.16
ITM2C-203ENST00000335005 SNAPC4Q5SXM2 1469 aa34.82■■■■□ 3.16
ITM2C-203ENST00000335005 PHLDB1Q86UU1 1377 aa34.78■■■■□ 3.16
ITM2C-203ENST00000335005 P3H3Q8IVL6 736 aa34.76■■■■□ 3.16
ITM2C-203ENST00000335005 THOC2Q8NI27 1593 aaKnown RBP34.75■■■■□ 3.15
ITM2C-203ENST00000335005 ADAMTS12P58397 1594 aa34.72■■■■□ 3.15
ITM2C-203ENST00000335005 WDR62O43379 1518 aa34.68■■■■□ 3.14
ITM2C-203ENST00000335005 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.67■■■■□ 3.14
ITM2C-203ENST00000335005 LRRIQ1Q96JM4 1722 aa34.66■■■■□ 3.14
ITM2C-203ENST00000335005 GRIN2BQ13224 1484 aa34.64■■■■□ 3.14
ITM2C-203ENST00000335005 IFT140Q96RY7 1462 aa34.6■■■■□ 3.13
ITM2C-203ENST00000335005 RAB3GAP2Q9H2M9 1393 aa34.57■■■■□ 3.13
ITM2C-203ENST00000335005 IQGAP2Q13576 1575 aa34.57■■■■□ 3.12
ITM2C-203ENST00000335005 SETD5Q9C0A6 1442 aa34.56■■■■□ 3.12
ITM2C-203ENST00000335005 ATP1B4Q9UN42 357 aaPredicted RBP34.5■■■■□ 3.11
ITM2C-203ENST00000335005 ITGAEP38570 1179 aa34.48■■■■□ 3.11
ITM2C-203ENST00000335005 EHBP1L1Q8N3D4 1523 aa34.48■■■■□ 3.11
ITM2C-203ENST00000335005 MAPKBP1O60336 1514 aa34.47■■■■□ 3.11
ITM2C-203ENST00000335005 FGD6Q6ZV73 1430 aa34.47■■■■□ 3.11
ITM2C-203ENST00000335005 SUPT6HQ7KZ85 1726 aaKnown RBP34.44■■■■□ 3.1
ITM2C-203ENST00000335005 CCDC18Q5T9S5 1454 aa34.44■■■■□ 3.1
ITM2C-203ENST00000335005 UGGT2Q9NYU1 1516 aa34.43■■■■□ 3.1
ITM2C-203ENST00000335005 MTUS2Q5JR59 1369 aa34.43■■■■□ 3.1
ITM2C-203ENST00000335005 HECW1Q76N89 1606 aa34.42■■■■□ 3.1
ITM2C-203ENST00000335005 FAM50AQ14320 339 aaKnown RBP34.41■■■■□ 3.1
ITM2C-203ENST00000335005 ZNF608Q9ULD9 1512 aaPredicted RBP34.41■■■■□ 3.1
ITM2C-203ENST00000335005 ARHGEF11O15085 1522 aa34.38■■■■□ 3.09
ITM2C-203ENST00000335005 NCOA2Q15596 1464 aa34.36■■■■□ 3.09
ITM2C-203ENST00000335005 EIF4G3O43432 1585 aaKnown RBP34.36■■■■□ 3.09
ITM2C-203ENST00000335005 MYOM3Q5VTT5 1437 aa34.33■■■■□ 3.09
ITM2C-203ENST00000335005 MAGI3Q5TCQ9 1506 aa34.29■■■■□ 3.08
ITM2C-203ENST00000335005 KIAA0586Q9BVV6 1533 aa34.28■■■■□ 3.08
ITM2C-203ENST00000335005 EPRSP07814 1512 aaKnown RBP34.24■■■■□ 3.07
ITM2C-203ENST00000335005 GRIN2AQ12879 1464 aa34.23■■■■□ 3.07
ITM2C-203ENST00000335005 KIAA0556O60303 1618 aa34.22■■■■□ 3.07
ITM2C-203ENST00000335005 ERCC6Q03468 1493 aa34.22■■■■□ 3.07
ITM2C-203ENST00000335005 PTPN23Q9H3S7 1636 aa34.21■■■■□ 3.07
ITM2C-203ENST00000335005 ACIN1Q9UKV3 1341 aaKnown RBP34.21■■■■□ 3.07
ITM2C-203ENST00000335005 MAGI1Q96QZ7 1491 aaPredicted RBP34.19■■■■□ 3.06
ITM2C-203ENST00000335005 HFM1A2PYH4 1435 aa34.19■■■■□ 3.06
ITM2C-203ENST00000335005 SCAF1Q9H7N4 1312 aaKnown RBP34.18■■■■□ 3.06
ITM2C-203ENST00000335005 TCOF1Q13428 1488 aaKnown RBP34.17■■■■□ 3.06
ITM2C-203ENST00000335005 DISP1Q96F81 1524 aa34.16■■■■□ 3.06
ITM2C-203ENST00000335005 CENPBP07199 599 aaPredicted RBP34.16■■■■□ 3.06
ITM2C-203ENST00000335005 PTPRKQ15262 1439 aa34.14■■■■□ 3.06
ITM2C-203ENST00000335005 MIER1Q8N108 512 aa34.09■■■■□ 3.05
ITM2C-203ENST00000335005 CDK13Q14004 1512 aaKnown RBP34.08■■■■□ 3.05
ITM2C-203ENST00000335005 NEUROD1Q13562 356 aa34.08■■■■□ 3.05
ITM2C-203ENST00000335005 TIMELESSQ9UNS1 1208 aa34.07■■■■□ 3.05
ITM2C-203ENST00000335005 SYNJ2O15056 1496 aa34.06■■■■□ 3.04
ITM2C-203ENST00000335005 MIA2Q96PC5 1412 aa34.04■■■■□ 3.04
ITM2C-203ENST00000335005 NAIPQ13075 1403 aa34.04■■■■□ 3.04
ITM2C-203ENST00000335005 RAPGEF6Q8TEU7 1601 aa34.03■■■■□ 3.04
ITM2C-203ENST00000335005 UACAQ9BZF9 1416 aa34.02■■■■□ 3.04
ITM2C-203ENST00000335005 GCC2Q8IWJ2 1684 aa34.02■■■■□ 3.04
ITM2C-203ENST00000335005 CEP170Q5SW79 1584 aa34.01■■■■□ 3.04
ITM2C-203ENST00000335005 AKNAQ7Z591 1439 aa34■■■■□ 3.03
ITM2C-203ENST00000335005 NUP153P49790 1475 aaKnown RBP33.96■■■■□ 3.03
ITM2C-203ENST00000335005 NUP160Q12769 1436 aa33.93■■■■□ 3.02
ITM2C-203ENST00000335005 SIN3AQ96ST3 1273 aa33.89■■■■□ 3.02
ITM2C-203ENST00000335005 CHMP7Q8WUX9 453 aaPredicted RBP33.82■■■■□ 3
ITM2C-203ENST00000335005 DNMT1P26358 1616 aaKnown RBP33.77■■■■□ 3
ITM2C-203ENST00000335005 ADCY10Q96PN6 1610 aa33.77■■■■□ 3
ITM2C-203ENST00000335005 CARMIL2Q6F5E8 1435 aa33.75■■■□□ 2.99
ITM2C-203ENST00000335005 PPP1R15AO75807 674 aaPredicted RBP33.74■■■□□ 2.99
ITM2C-203ENST00000335005 CDK11AQ9UQ88 783 aaPredicted RBP33.72■■■□□ 2.99
ITM2C-203ENST00000335005 TROQ12816 1431 aaPredicted RBP33.72■■■□□ 2.99
ITM2C-203ENST00000335005 ITSN2Q9NZM3 1697 aa33.71■■■□□ 2.99
ITM2C-203ENST00000335005 ROCK1Q13464 1354 aa33.71■■■□□ 2.99
ITM2C-203ENST00000335005 KDM6BO15054 1643 aa33.69■■■□□ 2.98
ITM2C-203ENST00000335005 DAPK1P53355 1430 aa33.68■■■□□ 2.98
ITM2C-203ENST00000335005 PLB1Q6P1J6 1458 aa33.67■■■□□ 2.98
ITM2C-203ENST00000335005 TONSLQ96HA7 1378 aa33.65■■■□□ 2.98
ITM2C-203ENST00000335005 YTHDC1Q96MU7 727 aaKnown RBP33.65■■■□□ 2.98
ITM2C-203ENST00000335005 DENND4BO75064 1496 aaPredicted RBP33.65■■■□□ 2.98
ITM2C-203ENST00000335005 ABCA8O94911 1581 aa33.64■■■□□ 2.98
ITM2C-203ENST00000335005 ARID3CA6NKF2 412 aa33.63■■■□□ 2.97
ITM2C-203ENST00000335005 GTF3C3Q9Y5Q9 886 aa33.63■■■□□ 2.97
ITM2C-203ENST00000335005 JPH4Q96JJ6 628 aa33.63■■■□□ 2.97
ITM2C-203ENST00000335005 RRP7BPQ9NSQ0 103 aa33.62■■■□□ 2.97
ITM2C-203ENST00000335005 KDM5BQ9UGL1 1544 aa33.62■■■□□ 2.97
ITM2C-203ENST00000335005 ABCC5O15440 1437 aa33.62■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms