RNA–Protein interactions for RNA: ENST00000334271.7

AP1S3-201, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 2

Gene AP1S3, Length 2,201 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-201ENST00000334271 UBTFP17480 764 aaKnown RBP16.49■□□□□ 0.23
AP1S3-201ENST00000334271 GRIN2BQ13224 1484 aa16.48■□□□□ 0.23
AP1S3-201ENST00000334271 RANGAP1P46060 587 aaPredicted RBP16.48■□□□□ 0.23
AP1S3-201ENST00000334271 FHAD1B1AJZ9 1412 aa16.44■□□□□ 0.22
AP1S3-201ENST00000334271 KCNA4P22459 653 aa16.42■□□□□ 0.22
AP1S3-201ENST00000334271 TDRD9Q8NDG6 1382 aaKnown RBP16.42■□□□□ 0.22
AP1S3-201ENST00000334271 ADAMTS12P58397 1594 aa16.42■□□□□ 0.22
AP1S3-201ENST00000334271 CTTNBP2Q8WZ74 1663 aa16.41■□□□□ 0.22
AP1S3-201ENST00000334271 CLIP1P30622 1438 aa16.41■□□□□ 0.22
AP1S3-201ENST00000334271 EIF4G3O43432 1585 aaKnown RBP16.41■□□□□ 0.22
AP1S3-201ENST00000334271 MAGI1Q96QZ7 1491 aaPredicted RBP16.41■□□□□ 0.22
AP1S3-201ENST00000334271 EFCAB5A4FU69 1503 aa16.37■□□□□ 0.21
AP1S3-201ENST00000334271 AQRO60306 1485 aaKnown RBP eCLIP16.34■□□□□ 0.21
AP1S3-201ENST00000334271 ZNF608Q9ULD9 1512 aaPredicted RBP16.33■□□□□ 0.21
AP1S3-201ENST00000334271 VPS8Q8N3P4 1428 aa16.32■□□□□ 0.2
AP1S3-201ENST00000334271 SYNJ2O15056 1496 aa16.29■□□□□ 0.2
AP1S3-201ENST00000334271 TULP1O00294 542 aaPredicted RBP16.27■□□□□ 0.2
AP1S3-201ENST00000334271 SNAPC4Q5SXM2 1469 aa16.27■□□□□ 0.2
AP1S3-201ENST00000334271 ARHGAP35Q9NRY4 1499 aa16.26■□□□□ 0.19
AP1S3-201ENST00000334271 GRIN2AQ12879 1464 aa16.25■□□□□ 0.19
AP1S3-201ENST00000334271 ARAP1Q96P48 1450 aa16.24■□□□□ 0.19
AP1S3-201ENST00000334271 SAMD9Q5K651 1589 aa16.24■□□□□ 0.19
AP1S3-201ENST00000334271 HOMEZQ8IX15 550 aa16.24■□□□□ 0.19
AP1S3-201ENST00000334271 KLHL34Q8N239 644 aa16.23■□□□□ 0.19
AP1S3-201ENST00000334271 MAP3K1Q13233 1512 aa16.23■□□□□ 0.19
AP1S3-201ENST00000334271 KIAA0586Q9BVV6 1533 aa16.23■□□□□ 0.19
AP1S3-201ENST00000334271 IQGAP2Q13576 1575 aa16.23■□□□□ 0.19
AP1S3-201ENST00000334271 UGGT2Q9NYU1 1516 aa16.2■□□□□ 0.18
AP1S3-201ENST00000334271 NUP160Q12769 1436 aa16.18■□□□□ 0.18
AP1S3-201ENST00000334271 FMN1Q68DA7 1419 aa16.17■□□□□ 0.18
AP1S3-201ENST00000334271 TRIM26Q12899 539 aaPredicted RBP16.15■□□□□ 0.18
AP1S3-201ENST00000334271 TAOK2Q9UL54 1235 aa16.13■□□□□ 0.17
AP1S3-201ENST00000334271 FYCO1Q9BQS8 1478 aa16.12■□□□□ 0.17
AP1S3-201ENST00000334271 CHMP7Q8WUX9 453 aaPredicted RBP16.11■□□□□ 0.17
AP1S3-201ENST00000334271 CASKIN1Q8WXD9 1431 aa16.09■□□□□ 0.17
AP1S3-201ENST00000334271 CEP170Q5SW79 1584 aa16.09■□□□□ 0.17
AP1S3-201ENST00000334271 CFAP43Q8NDM7 1665 aa16.06■□□□□ 0.16
AP1S3-201ENST00000334271 KIAA0556O60303 1618 aa16.05■□□□□ 0.16
AP1S3-201ENST00000334271 CHD1O14646 1710 aa16.04■□□□□ 0.16
AP1S3-201ENST00000334271 CARMIL2Q6F5E8 1435 aa16.03■□□□□ 0.16
AP1S3-201ENST00000334271 TIAM1Q13009 1591 aa16.03■□□□□ 0.16
AP1S3-201ENST00000334271 PCF11O94913 1555 aaKnown RBP16.02■□□□□ 0.15
AP1S3-201ENST00000334271 CCDC18Q5T9S5 1454 aa16.01■□□□□ 0.15
AP1S3-201ENST00000334271 FHOD3Q2V2M9 1422 aa16.01■□□□□ 0.15
AP1S3-201ENST00000334271 DISP1Q96F81 1524 aa16.01■□□□□ 0.15
AP1S3-201ENST00000334271 SHROOM2Q13796 1616 aa16■□□□□ 0.15
AP1S3-201ENST00000334271 HECW1Q76N89 1606 aa15.99■□□□□ 0.15
AP1S3-201ENST00000334271 PODXL2Q9NZ53 605 aa15.99■□□□□ 0.15
AP1S3-201ENST00000334271 PLEKHG5O94827 1062 aa15.97■□□□□ 0.15
AP1S3-201ENST00000334271 CLASP1Q7Z460 1538 aa15.94■□□□□ 0.14
AP1S3-201ENST00000334271 JPH4Q96JJ6 628 aa15.93■□□□□ 0.14
AP1S3-201ENST00000334271 BCL11AQ9H165 835 aa15.93■□□□□ 0.14
AP1S3-201ENST00000334271 LRRC9Q6ZRR7 1453 aa15.93■□□□□ 0.14
AP1S3-201ENST00000334271 FBLN2P98095 1184 aa15.91■□□□□ 0.14
AP1S3-201ENST00000334271 RAPGEF6Q8TEU7 1601 aa15.9■□□□□ 0.14
AP1S3-201ENST00000334271 PCGF6Q9BYE7 350 aa15.9■□□□□ 0.14
AP1S3-201ENST00000334271 EHBP1L1Q8N3D4 1523 aa15.88■□□□□ 0.13
AP1S3-201ENST00000334271 RRBP1Q9P2E9 1410 aaKnown RBP15.86■□□□□ 0.13
AP1S3-201ENST00000334271 TPRNQ4KMQ1 711 aa15.86■□□□□ 0.13
AP1S3-201ENST00000334271 P3H3Q8IVL6 736 aa15.86■□□□□ 0.13
AP1S3-201ENST00000334271 LRRIQ1Q96JM4 1722 aa15.85■□□□□ 0.13
AP1S3-201ENST00000334271 EPRSP07814 1512 aaKnown RBP15.85■□□□□ 0.13
AP1S3-201ENST00000334271 ABCA8O94911 1581 aa15.84■□□□□ 0.13
AP1S3-201ENST00000334271 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.84■□□□□ 0.13
AP1S3-201ENST00000334271 BCANQ96GW7 911 aa15.84■□□□□ 0.13
AP1S3-201ENST00000334271 PRG4Q92954 1404 aaPredicted RBP15.83■□□□□ 0.13
AP1S3-201ENST00000334271 SUPT6HQ7KZ85 1726 aaKnown RBP15.82■□□□□ 0.12
AP1S3-201ENST00000334271 KANK4Q5T7N3 995 aaPredicted RBP15.79■□□□□ 0.12
AP1S3-201ENST00000334271 NUP153P49790 1475 aaKnown RBP15.79■□□□□ 0.12
AP1S3-201ENST00000334271 ARHGEF11O15085 1522 aa15.79■□□□□ 0.12
AP1S3-201ENST00000334271 CDK11AQ9UQ88 783 aaPredicted RBP15.79■□□□□ 0.12
AP1S3-201ENST00000334271 MTUS2Q5JR59 1369 aa15.78■□□□□ 0.12
AP1S3-201ENST00000334271 PTPRGP23470 1445 aa15.77■□□□□ 0.12
AP1S3-201ENST00000334271 UHRF1BP1LA0JNW5 1464 aa15.76■□□□□ 0.11
AP1S3-201ENST00000334271 ADCY10Q96PN6 1610 aa15.75■□□□□ 0.11
AP1S3-201ENST00000334271 CCNB3Q8WWL7 1395 aa15.74■□□□□ 0.11
AP1S3-201ENST00000334271 UACAQ9BZF9 1416 aa15.72■□□□□ 0.11
AP1S3-201ENST00000334271 PPARGC1BQ86YN6 1023 aaKnown RBP15.72■□□□□ 0.11
AP1S3-201ENST00000334271 OSCARQ8IYS5 282 aa15.71■□□□□ 0.11
AP1S3-201ENST00000334271 MIA2Q96PC5 1412 aa15.71■□□□□ 0.11
AP1S3-201ENST00000334271 ABCC2Q92887 1545 aa15.71■□□□□ 0.11
AP1S3-201ENST00000334271 NCOA2Q15596 1464 aa15.71■□□□□ 0.1
AP1S3-201ENST00000334271 PLB1Q6P1J6 1458 aa15.71■□□□□ 0.1
AP1S3-201ENST00000334271 ATP1B4Q9UN42 357 aaPredicted RBP15.7■□□□□ 0.1
AP1S3-201ENST00000334271 TROQ12816 1431 aaPredicted RBP15.7■□□□□ 0.1
AP1S3-201ENST00000334271 MYOM3Q5VTT5 1437 aa15.69■□□□□ 0.1
AP1S3-201ENST00000334271 GTF3C3Q9Y5Q9 886 aa15.68■□□□□ 0.1
AP1S3-201ENST00000334271 CDK13Q14004 1512 aaKnown RBP15.68■□□□□ 0.1
AP1S3-201ENST00000334271 MAGI3Q5TCQ9 1506 aa15.68■□□□□ 0.1
AP1S3-201ENST00000334271 NPM2Q86SE8 214 aaKnown RBP15.67■□□□□ 0.1
AP1S3-201ENST00000334271 PHLDB1Q86UU1 1377 aa15.67■□□□□ 0.1
AP1S3-201ENST00000334271 ITSN2Q9NZM3 1697 aa15.66■□□□□ 0.1
AP1S3-201ENST00000334271 FGD6Q6ZV73 1430 aa15.66■□□□□ 0.1
AP1S3-201ENST00000334271 TCOF1Q13428 1488 aaKnown RBP15.66■□□□□ 0.1
AP1S3-201ENST00000334271 ATP10BO94823 1461 aa15.66■□□□□ 0.1
AP1S3-201ENST00000334271 ZEB1P37275 1124 aaPredicted RBP15.65■□□□□ 0.1
AP1S3-201ENST00000334271 KIF14Q15058 1648 aa15.63■□□□□ 0.09
AP1S3-201ENST00000334271 KDM5BQ9UGL1 1544 aa15.63■□□□□ 0.09
AP1S3-201ENST00000334271 ACIN1Q9UKV3 1341 aaKnown RBP15.63■□□□□ 0.09
AP1S3-201ENST00000334271 ERCC6L2Q5T890 1561 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms