RNA–Protein interactions for RNA: ENST00000334186.8

PPFIA3-201, Transcript of PTPRF interacting protein alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPFIA3, Length 4,733 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-201ENST00000334186 SMARCA4P51532 1647 aa22.24■■□□□ 1.15
PPFIA3-201ENST00000334186 TSPY4P0CV99 314 aa22.24■■□□□ 1.15
PPFIA3-201ENST00000334186 TSPY10P0CW01 314 aa22.24■■□□□ 1.15
PPFIA3-201ENST00000334186 CCDC136Q96JN2 1154 aa22.24■■□□□ 1.15
PPFIA3-201ENST00000334186 GLIPR1L2Q4G1C9 344 aa22.23■■□□□ 1.15
PPFIA3-201ENST00000334186 IRX6P78412 446 aaPredicted RBP22.23■■□□□ 1.15
PPFIA3-201ENST00000334186 SUPT16HQ9Y5B9 1047 aaKnown RBP22.21■■□□□ 1.15
PPFIA3-201ENST00000334186 HIRIP3Q9BW71 556 aaPredicted RBP22.19■■□□□ 1.14
PPFIA3-201ENST00000334186 TMC1Q8TDI8 760 aa22.18■■□□□ 1.14
PPFIA3-201ENST00000334186 CHGAP10645 457 aaKnown RBP22.17■■□□□ 1.14
PPFIA3-201ENST00000334186 MRS2Q9HD23 443 aa22.17■■□□□ 1.14
PPFIA3-201ENST00000334186 RRP7BPQ9NSQ0 103 aa22.17■■□□□ 1.14
PPFIA3-201ENST00000334186 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.16■■□□□ 1.14
PPFIA3-201ENST00000334186 CUX2O14529 1486 aa22.14■■□□□ 1.14
PPFIA3-201ENST00000334186 EIF4G2P78344 907 aaKnown RBP eCLIP22.14■■□□□ 1.134e-8■■■■■ 37.9
PPFIA3-201ENST00000334186 KDM2AQ9Y2K7 1162 aa22.11■■□□□ 1.13
PPFIA3-201ENST00000334186 SALL2Q9Y467 1007 aaPredicted RBP22.11■■□□□ 1.13
PPFIA3-201ENST00000334186 ERCC6Q03468 1493 aa22.11■■□□□ 1.13
PPFIA3-201ENST00000334186 NPM1P06748 294 aaKnown RBP eCLIP22.09■■□□□ 1.13
PPFIA3-201ENST00000334186 SLC24A1O60721 1099 aa22.06■■□□□ 1.12
PPFIA3-201ENST00000334186 CARMIL1Q5VZK9 1371 aa22.06■■□□□ 1.12
PPFIA3-201ENST00000334186 CADPSQ9ULU8 1353 aa22.04■■□□□ 1.12
PPFIA3-201ENST00000334186 ESF1Q9H501 851 aaKnown RBP22.02■■□□□ 1.11
PPFIA3-201ENST00000334186 STAG3Q9UJ98 1225 aa22.01■■□□□ 1.11
PPFIA3-201ENST00000334186 TDRD9Q8NDG6 1382 aaKnown RBP21.98■■□□□ 1.11
PPFIA3-201ENST00000334186 PLEKHD1A6NEE1 506 aa21.98■■□□□ 1.11
PPFIA3-201ENST00000334186 ANP32BQ92688 251 aaKnown RBP21.97■■□□□ 1.11
PPFIA3-201ENST00000334186 WDR43Q15061 677 aaKnown RBP eCLIP21.96■■□□□ 1.11
PPFIA3-201ENST00000334186 PDS5BQ9NTI5 1447 aa21.94■■□□□ 1.1
PPFIA3-201ENST00000334186 UPF2Q9HAU5 1272 aaKnown RBP21.93■■□□□ 1.1
PPFIA3-201ENST00000334186 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.93■■□□□ 1.1
PPFIA3-201ENST00000334186 CCNB3Q8WWL7 1395 aa21.92■■□□□ 1.1
PPFIA3-201ENST00000334186 CFDP1Q9UEE9 299 aaPredicted RBP21.91■■□□□ 1.1
PPFIA3-201ENST00000334186 RUSC2Q8N2Y8 1516 aa21.91■■□□□ 1.1
PPFIA3-201ENST00000334186 RBM19Q9Y4C8 960 aaKnown RBP21.91■■□□□ 1.1
PPFIA3-201ENST00000334186 SIN3AQ96ST3 1273 aa21.9■■□□□ 1.1
PPFIA3-201ENST00000334186 ARXQ96QS3 562 aa21.89■■□□□ 1.09
PPFIA3-201ENST00000334186 FHAD1B1AJZ9 1412 aa21.89■■□□□ 1.09
PPFIA3-201ENST00000334186 KCNH8Q96L42 1107 aa21.88■■□□□ 1.09
PPFIA3-201ENST00000334186 VPS8Q8N3P4 1428 aa21.87■■□□□ 1.09
PPFIA3-201ENST00000334186 RTN4Q9NQC3 1192 aaKnown RBP21.85■■□□□ 1.09
PPFIA3-201ENST00000334186 HSP90AA1P07900 732 aaKnown RBP21.84■■□□□ 1.09
PPFIA3-201ENST00000334186 TSHZ2Q9NRE2 1034 aa21.84■■□□□ 1.09
PPFIA3-201ENST00000334186 NOP58Q9Y2X3 529 aaKnown RBP21.84■■□□□ 1.09
PPFIA3-201ENST00000334186 PPP4R2Q9NY27 417 aa21.83■■□□□ 1.08
PPFIA3-201ENST00000334186 DEKP35659 375 aaKnown RBP21.82■■□□□ 1.08
PPFIA3-201ENST00000334186 RGL3Q3MIN7 710 aa21.82■■□□□ 1.08
PPFIA3-201ENST00000334186 EIF4G1Q04637 1599 aaKnown RBP21.8■■□□□ 1.08
PPFIA3-201ENST00000334186 DDRGK1Q96HY6 314 aa21.8■■□□□ 1.08
PPFIA3-201ENST00000334186 KANK4Q5T7N3 995 aaPredicted RBP21.78■■□□□ 1.08
PPFIA3-201ENST00000334186 PPM1GO15355 546 aaPredicted RBP21.78■■□□□ 1.08
PPFIA3-201ENST00000334186 NCAPD3P42695 1498 aa21.77■■□□□ 1.08
PPFIA3-201ENST00000334186 RAPGEF2Q9Y4G8 1499 aa21.76■■□□□ 1.07
PPFIA3-201ENST00000334186 TIMELESSQ9UNS1 1208 aa21.75■■□□□ 1.07
PPFIA3-201ENST00000334186 CARD11Q9BXL7 1154 aa21.75■■□□□ 1.07
PPFIA3-201ENST00000334186 FANCD2Q9BXW9 1451 aa21.74■■□□□ 1.07
PPFIA3-201ENST00000334186 ERICH6BQ5W0A0 696 aa21.71■■□□□ 1.07
PPFIA3-201ENST00000334186 LAS1LQ9Y4W2 734 aaKnown RBP21.7■■□□□ 1.06
PPFIA3-201ENST00000334186 B4GALNT3Q6L9W6 998 aa21.68■■□□□ 1.06
PPFIA3-201ENST00000334186 PLPPR3Q6T4P5 718 aa21.67■■□□□ 1.06
PPFIA3-201ENST00000334186 SETD5Q9C0A6 1442 aa21.67■■□□□ 1.06
PPFIA3-201ENST00000334186 CDCA8Q53HL2 280 aa21.67■■□□□ 1.06
PPFIA3-201ENST00000334186 KNSTRNQ9Y448 316 aa21.64■■□□□ 1.05
PPFIA3-201ENST00000334186 SENP3-EIF4A1A0A087X0R7 540 aa21.63■■□□□ 1.05
PPFIA3-201ENST00000334186 BECN1Q14457 450 aa21.61■■□□□ 1.05
PPFIA3-201ENST00000334186 BICRAQ9NZM4 1560 aa21.6■■□□□ 1.05
PPFIA3-201ENST00000334186 ARHGAP35Q9NRY4 1499 aa21.6■■□□□ 1.05
PPFIA3-201ENST00000334186 TRIM44Q96DX7 344 aaPredicted RBP21.58■■□□□ 1.05
PPFIA3-201ENST00000334186 CCER2I3L3R5 266 aa21.56■■□□□ 1.04
PPFIA3-201ENST00000334186 FHOD3Q2V2M9 1422 aa21.55■■□□□ 1.04
PPFIA3-201ENST00000334186 FGD5Q6ZNL6 1462 aa21.54■■□□□ 1.04
PPFIA3-201ENST00000334186 CFAP53Q96M91 514 aa21.54■■□□□ 1.04
PPFIA3-201ENST00000334186 SENP3Q9H4L4 574 aaPredicted RBP21.54■■□□□ 1.04
PPFIA3-201ENST00000334186 RAD54L2Q9Y4B4 1467 aa21.53■■□□□ 1.04
PPFIA3-201ENST00000334186 RAB3GAP2Q9H2M9 1393 aa21.53■■□□□ 1.04
PPFIA3-201ENST00000334186 PPP1R15AO75807 674 aaPredicted RBP21.52■■□□□ 1.04
PPFIA3-201ENST00000334186 IGF1RP08069 1367 aa21.51■■□□□ 1.03
PPFIA3-201ENST00000334186 MYH16Q9H6N6 1097 aa21.5■■□□□ 1.03
PPFIA3-201ENST00000334186 NAP1L5Q96NT1 182 aaPredicted RBP21.49■■□□□ 1.03
PPFIA3-201ENST00000334186 FMN1Q68DA7 1419 aa21.49■■□□□ 1.03
PPFIA3-201ENST00000334186 DCAF11Q8TEB1 546 aa21.49■■□□□ 1.03
PPFIA3-201ENST00000334186 NESP48681 1621 aa21.47■■□□□ 1.03
PPFIA3-201ENST00000334186 HSPA5P11021 654 aaKnown RBP21.47■■□□□ 1.03
PPFIA3-201ENST00000334186 CFTRP13569 1480 aa21.45■■□□□ 1.02
PPFIA3-201ENST00000334186 DNAJC5BQ9UF47 199 aa21.45■■□□□ 1.02
PPFIA3-201ENST00000334186 CC2D2AQ9P2K1 1620 aa21.44■■□□□ 1.02
PPFIA3-201ENST00000334186 CC2D1BQ5T0F9 858 aaKnown RBP21.41■■□□□ 1.02
PPFIA3-201ENST00000334186 JPH4Q96JJ6 628 aa21.41■■□□□ 1.02
PPFIA3-201ENST00000334186 TMF1P82094 1093 aa21.4■■□□□ 1.02
PPFIA3-201ENST00000334186 CARMIL2Q6F5E8 1435 aa21.4■■□□□ 1.02
PPFIA3-201ENST00000334186 SYNJ1O43426 1573 aa21.4■■□□□ 1.02
PPFIA3-201ENST00000334186 PKD2Q13563 968 aa21.4■■□□□ 1.02
PPFIA3-201ENST00000334186 NEUROD2Q15784 382 aa21.39■■□□□ 1.01
PPFIA3-201ENST00000334186 FOXD1Q16676 465 aa21.38■■□□□ 1.01
PPFIA3-201ENST00000334186 MPHOSPH9Q99550 1183 aa21.37■■□□□ 1.01
PPFIA3-201ENST00000334186 GAPVD1Q14C86 1478 aa21.35■■□□□ 1.01
PPFIA3-201ENST00000334186 RGS3P49796 1198 aa21.35■■□□□ 1.01
PPFIA3-201ENST00000334186 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.35■■□□□ 1.01
PPFIA3-201ENST00000334186 GOLGA6L22H0YM25 854 aa21.35■■□□□ 1.01
PPFIA3-201ENST00000334186 HMGXB3Q12766 1538 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms