RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 DIEXFQ68CQ4 756 aaKnown RBP16.02■□□□□ 0.15
CCDC172-201ENST00000333254 CCNB3Q8WWL7 1395 aa16.01■□□□□ 0.15
CCDC172-201ENST00000333254 NESP48681 1621 aa16■□□□□ 0.15
CCDC172-201ENST00000333254 URB2Q14146 1524 aaKnown RBP16■□□□□ 0.15
CCDC172-201ENST00000333254 PCF11O94913 1555 aaKnown RBP16■□□□□ 0.15
CCDC172-201ENST00000333254 FYCO1Q9BQS8 1478 aa16■□□□□ 0.15
CCDC172-201ENST00000333254 LRRC9Q6ZRR7 1453 aa15.99■□□□□ 0.15
CCDC172-201ENST00000333254 RAD54L2Q9Y4B4 1467 aa15.99■□□□□ 0.15
CCDC172-201ENST00000333254 RANGAP1P46060 587 aaPredicted RBP15.99■□□□□ 0.15
CCDC172-201ENST00000333254 DHX57Q6P158 1386 aaKnown RBP15.98■□□□□ 0.15
CCDC172-201ENST00000333254 KIF21AQ7Z4S6 1674 aa15.97■□□□□ 0.15
CCDC172-201ENST00000333254 PDS5BQ9NTI5 1447 aa15.96■□□□□ 0.15
CCDC172-201ENST00000333254 SAMD9Q5K651 1589 aa15.95■□□□□ 0.14
CCDC172-201ENST00000333254 CASKIN1Q8WXD9 1431 aa15.94■□□□□ 0.14
CCDC172-201ENST00000333254 THOC2Q8NI27 1593 aaKnown RBP15.92■□□□□ 0.14
CCDC172-201ENST00000333254 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.91■□□□□ 0.14
CCDC172-201ENST00000333254 TARBP1Q13395 1621 aaKnown RBP15.9■□□□□ 0.14
CCDC172-201ENST00000333254 FMN1Q68DA7 1419 aa15.89■□□□□ 0.13
CCDC172-201ENST00000333254 GAPVD1Q14C86 1478 aa15.88■□□□□ 0.13
CCDC172-201ENST00000333254 SNAPC4Q5SXM2 1469 aa15.86■□□□□ 0.13
CCDC172-201ENST00000333254 PBRM1Q86U86 1689 aa15.86■□□□□ 0.13
CCDC172-201ENST00000333254 ACIN1Q9UKV3 1341 aaKnown RBP15.84■□□□□ 0.13
CCDC172-201ENST00000333254 FHOD3Q2V2M9 1422 aa15.83■□□□□ 0.13
CCDC172-201ENST00000333254 CENPBP07199 599 aaPredicted RBP15.83■□□□□ 0.13
CCDC172-201ENST00000333254 PHLDB1Q86UU1 1377 aa15.82■□□□□ 0.12
CCDC172-201ENST00000333254 SCAF1Q9H7N4 1312 aaKnown RBP15.81■□□□□ 0.12
CCDC172-201ENST00000333254 LRRIQ1Q96JM4 1722 aa15.81■□□□□ 0.12
CCDC172-201ENST00000333254 SETD5Q9C0A6 1442 aa15.8■□□□□ 0.12
CCDC172-201ENST00000333254 MAPKBP1O60336 1514 aa15.79■□□□□ 0.12
CCDC172-201ENST00000333254 GRIN2BQ13224 1484 aa15.79■□□□□ 0.12
CCDC172-201ENST00000333254 RAB3GAP2Q9H2M9 1393 aa15.78■□□□□ 0.12
CCDC172-201ENST00000333254 ADAMTS12P58397 1594 aa15.77■□□□□ 0.11
CCDC172-201ENST00000333254 EHBP1L1Q8N3D4 1523 aa15.76■□□□□ 0.11
CCDC172-201ENST00000333254 SUPT6HQ7KZ85 1726 aaKnown RBP15.75■□□□□ 0.11
CCDC172-201ENST00000333254 MRC2Q9UBG0 1479 aa15.75■□□□□ 0.11
CCDC172-201ENST00000333254 TDRD9Q8NDG6 1382 aaKnown RBP15.73■□□□□ 0.11
CCDC172-201ENST00000333254 CCDC18Q5T9S5 1454 aa15.73■□□□□ 0.11
CCDC172-201ENST00000333254 IQGAP2Q13576 1575 aa15.72■□□□□ 0.11
CCDC172-201ENST00000333254 FGD6Q6ZV73 1430 aa15.72■□□□□ 0.11
CCDC172-201ENST00000333254 HECW1Q76N89 1606 aa15.71■□□□□ 0.11
CCDC172-201ENST00000333254 ARHGEF11O15085 1522 aa15.71■□□□□ 0.11
CCDC172-201ENST00000333254 NEUROD1Q13562 356 aa15.71■□□□□ 0.11
CCDC172-201ENST00000333254 FOXD1Q16676 465 aa15.7■□□□□ 0.1
CCDC172-201ENST00000333254 WDR62O43379 1518 aa15.7■□□□□ 0.1
CCDC172-201ENST00000333254 TIMELESSQ9UNS1 1208 aa15.68■□□□□ 0.1
CCDC172-201ENST00000333254 UGGT2Q9NYU1 1516 aa15.67■□□□□ 0.1
CCDC172-201ENST00000333254 IFT140Q96RY7 1462 aa15.67■□□□□ 0.1
CCDC172-201ENST00000333254 MYOM3Q5VTT5 1437 aa15.66■□□□□ 0.1
CCDC172-201ENST00000333254 P3H3Q8IVL6 736 aa15.65■□□□□ 0.1
CCDC172-201ENST00000333254 NCOA2Q15596 1464 aa15.65■□□□□ 0.1
CCDC172-201ENST00000333254 MTUS2Q5JR59 1369 aa15.64■□□□□ 0.09
CCDC172-201ENST00000333254 HFM1A2PYH4 1435 aa15.63■□□□□ 0.09
CCDC172-201ENST00000333254 PTPN23Q9H3S7 1636 aa15.63■□□□□ 0.09
CCDC172-201ENST00000333254 PELP1Q8IZL8 1130 aaKnown RBP15.63■□□□□ 0.09
CCDC172-201ENST00000333254 MIER1Q8N108 512 aa15.63■□□□□ 0.09
CCDC172-201ENST00000333254 TCOF1Q13428 1488 aaKnown RBP15.63■□□□□ 0.09
CCDC172-201ENST00000333254 GCC2Q8IWJ2 1684 aa15.62■□□□□ 0.09
CCDC172-201ENST00000333254 AKNAQ7Z591 1439 aa15.6■□□□□ 0.09
CCDC172-201ENST00000333254 FAM50AQ14320 339 aaKnown RBP15.6■□□□□ 0.09
CCDC172-201ENST00000333254 ITGAEP38570 1179 aa15.59■□□□□ 0.09
CCDC172-201ENST00000333254 DNAJC5BQ9UF47 199 aa15.58■□□□□ 0.08
CCDC172-201ENST00000333254 MAGI3Q5TCQ9 1506 aa15.58■□□□□ 0.08
CCDC172-201ENST00000333254 UACAQ9BZF9 1416 aa15.57■□□□□ 0.08
CCDC172-201ENST00000333254 EPRSP07814 1512 aaKnown RBP15.57■□□□□ 0.08
CCDC172-201ENST00000333254 KIAA0586Q9BVV6 1533 aa15.56■□□□□ 0.08
CCDC172-201ENST00000333254 KIAA0556O60303 1618 aa15.56■□□□□ 0.08
CCDC172-201ENST00000333254 MIA2Q96PC5 1412 aa15.56■□□□□ 0.08
CCDC172-201ENST00000333254 ATP1B4Q9UN42 357 aaPredicted RBP15.54■□□□□ 0.08
CCDC172-201ENST00000333254 EIF4G3O43432 1585 aaKnown RBP15.54■□□□□ 0.08
CCDC172-201ENST00000333254 NAIPQ13075 1403 aa15.53■□□□□ 0.08
CCDC172-201ENST00000333254 GTF3C3Q9Y5Q9 886 aa15.53■□□□□ 0.08
CCDC172-201ENST00000333254 PTPRKQ15262 1439 aa15.52■□□□□ 0.08
CCDC172-201ENST00000333254 GRIN2AQ12879 1464 aa15.5■□□□□ 0.07
CCDC172-201ENST00000333254 MAGI1Q96QZ7 1491 aaPredicted RBP15.5■□□□□ 0.07
CCDC172-201ENST00000333254 DISP1Q96F81 1524 aa15.49■□□□□ 0.07
CCDC172-201ENST00000333254 RAPGEF6Q8TEU7 1601 aa15.49■□□□□ 0.07
CCDC172-201ENST00000333254 ZNF608Q9ULD9 1512 aaPredicted RBP15.48■□□□□ 0.07
CCDC172-201ENST00000333254 CDK13Q14004 1512 aaKnown RBP15.45■□□□□ 0.06
CCDC172-201ENST00000333254 DNMT1P26358 1616 aaKnown RBP15.44■□□□□ 0.06
CCDC172-201ENST00000333254 ADCY10Q96PN6 1610 aa15.44■□□□□ 0.06
CCDC172-201ENST00000333254 ITSN2Q9NZM3 1697 aa15.43■□□□□ 0.06
CCDC172-201ENST00000333254 PPP1R15AO75807 674 aaPredicted RBP15.43■□□□□ 0.06
CCDC172-201ENST00000333254 SYNJ2O15056 1496 aa15.42■□□□□ 0.06
CCDC172-201ENST00000333254 NUP153P49790 1475 aaKnown RBP15.41■□□□□ 0.06
CCDC172-201ENST00000333254 ROCK1Q13464 1354 aa15.41■□□□□ 0.06
CCDC172-201ENST00000333254 SIN3AQ96ST3 1273 aa15.41■□□□□ 0.06
CCDC172-201ENST00000333254 KDM5BQ9UGL1 1544 aa15.4■□□□□ 0.06
CCDC172-201ENST00000333254 YTHDC1Q96MU7 727 aaKnown RBP15.4■□□□□ 0.06
CCDC172-201ENST00000333254 CEP170Q5SW79 1584 aa15.39■□□□□ 0.05
CCDC172-201ENST00000333254 TONSLQ96HA7 1378 aa15.38■□□□□ 0.05
CCDC172-201ENST00000333254 ADGBQ8N7X0 1667 aa15.37■□□□□ 0.05
CCDC172-201ENST00000333254 NUP160Q12769 1436 aa15.37■□□□□ 0.05
CCDC172-201ENST00000333254 ERCC6Q03468 1493 aa15.36■□□□□ 0.05
CCDC172-201ENST00000333254 CROCC2H7BZ55 1655 aa15.35■□□□□ 0.05
CCDC172-201ENST00000333254 DENND4BO75064 1496 aaPredicted RBP15.34■□□□□ 0.05
CCDC172-201ENST00000333254 DAPK1P53355 1430 aa15.34■□□□□ 0.05
CCDC172-201ENST00000333254 KDM6BO15054 1643 aa15.33■□□□□ 0.04
CCDC172-201ENST00000333254 TROQ12816 1431 aaPredicted RBP15.33■□□□□ 0.04
CCDC172-201ENST00000333254 CDK11AQ9UQ88 783 aaPredicted RBP15.32■□□□□ 0.04
CCDC172-201ENST00000333254 CARMIL2Q6F5E8 1435 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms