RNA–Protein interactions for RNA: ENST00000333001.10

CMTM1-203, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 883 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-203ENST00000333001 AEBP2Q6ZN18 517 aaPredicted RBP20.82■□□□□ 0.92
CMTM1-203ENST00000333001 PRG4Q92954 1404 aaPredicted RBP20.81■□□□□ 0.92
CMTM1-203ENST00000333001 KIAA0586Q9BVV6 1533 aa20.81■□□□□ 0.92
CMTM1-203ENST00000333001 RUSC2Q8N2Y8 1516 aa20.79■□□□□ 0.92
CMTM1-203ENST00000333001 ERCC6L2Q5T890 1561 aa20.79■□□□□ 0.92
CMTM1-203ENST00000333001 RAPGEF2Q9Y4G8 1499 aa20.71■□□□□ 0.91
CMTM1-203ENST00000333001 CARMIL2Q6F5E8 1435 aa20.64■□□□□ 0.89
CMTM1-203ENST00000333001 IQGAP2Q13576 1575 aa20.63■□□□□ 0.89
CMTM1-203ENST00000333001 NPM1P06748 294 aaKnown RBP eCLIP20.6■□□□□ 0.89
CMTM1-203ENST00000333001 PRXQ9BXM0 1461 aa20.56■□□□□ 0.88
CMTM1-203ENST00000333001 PTPRGP23470 1445 aa20.56■□□□□ 0.88
CMTM1-203ENST00000333001 TNIKQ9UKE5 1360 aa20.56■□□□□ 0.88
CMTM1-203ENST00000333001 CSRNP3Q8WYN3 585 aa20.55■□□□□ 0.88
CMTM1-203ENST00000333001 EEA1Q15075 1411 aa20.54■□□□□ 0.88
CMTM1-203ENST00000333001 UGGT2Q9NYU1 1516 aa20.52■□□□□ 0.87
CMTM1-203ENST00000333001 CTTNBP2Q8WZ74 1663 aa20.48■□□□□ 0.87
CMTM1-203ENST00000333001 DISP1Q96F81 1524 aa20.48■□□□□ 0.87
CMTM1-203ENST00000333001 ADCY10Q96PN6 1610 aa20.47■□□□□ 0.87
CMTM1-203ENST00000333001 TTBK1Q5TCY1 1321 aaPredicted RBP20.46■□□□□ 0.87
CMTM1-203ENST00000333001 GOLGA3Q08378 1498 aa20.44■□□□□ 0.86
CMTM1-203ENST00000333001 KIF13AQ9H1H9 1805 aa20.44■□□□□ 0.86
CMTM1-203ENST00000333001 MAPKBP1O60336 1514 aa20.43■□□□□ 0.86
CMTM1-203ENST00000333001 CHIC1Q5VXU3 224 aa20.43■□□□□ 0.86
CMTM1-203ENST00000333001 KIAA0556O60303 1618 aa20.42■□□□□ 0.86
CMTM1-203ENST00000333001 FAM9AQ8IZU1 332 aaPredicted RBP20.41■□□□□ 0.86
CMTM1-203ENST00000333001 UACAQ9BZF9 1416 aa20.41■□□□□ 0.86
CMTM1-203ENST00000333001 UHRF1BP1LA0JNW5 1464 aa20.4■□□□□ 0.86
CMTM1-203ENST00000333001 FAM69CQ0P6D2 419 aa20.39■□□□□ 0.85
CMTM1-203ENST00000333001 ABCC2Q92887 1545 aa20.38■□□□□ 0.85
CMTM1-203ENST00000333001 ABCC10Q5T3U5 1492 aa20.37■□□□□ 0.85
CMTM1-203ENST00000333001 PLB1Q6P1J6 1458 aa20.3■□□□□ 0.84
CMTM1-203ENST00000333001 DIP2BQ9P265 1576 aa20.29■□□□□ 0.84
CMTM1-203ENST00000333001 KDM5BQ9UGL1 1544 aa20.29■□□□□ 0.84
CMTM1-203ENST00000333001 KIF21BO75037 1637 aa20.27■□□□□ 0.84
CMTM1-203ENST00000333001 ASXL2Q76L83 1435 aa20.27■□□□□ 0.83
CMTM1-203ENST00000333001 KDM6BO15054 1643 aa20.23■□□□□ 0.83
CMTM1-203ENST00000333001 ABCA8O94911 1581 aa20.21■□□□□ 0.83
CMTM1-203ENST00000333001 P3H3Q8IVL6 736 aa20.21■□□□□ 0.83
CMTM1-203ENST00000333001 ZCCHC11Q5TAX3 1644 aaKnown RBP20.2■□□□□ 0.82
CMTM1-203ENST00000333001 SAMD9Q5K651 1589 aa20.2■□□□□ 0.82
CMTM1-203ENST00000333001 GLI2P10070 1586 aa20.19■□□□□ 0.82
CMTM1-203ENST00000333001 TSPOAP1O95153 1857 aa20.19■□□□□ 0.82
CMTM1-203ENST00000333001 UBTFP17480 764 aaKnown RBP20.17■□□□□ 0.82
CMTM1-203ENST00000333001 EPRSP07814 1512 aaKnown RBP20.14■□□□□ 0.81
CMTM1-203ENST00000333001 RANGAP1P46060 587 aaPredicted RBP20.14■□□□□ 0.81
CMTM1-203ENST00000333001 WDR7Q9Y4E6 1490 aa20.13■□□□□ 0.81
CMTM1-203ENST00000333001 EFCAB5A4FU69 1503 aa20.12■□□□□ 0.81
CMTM1-203ENST00000333001 RAPGEF6Q8TEU7 1601 aa20.07■□□□□ 0.8
CMTM1-203ENST00000333001 ATP10BO94823 1461 aa20.06■□□□□ 0.8
CMTM1-203ENST00000333001 FHOD3Q2V2M9 1422 aa20.06■□□□□ 0.8
CMTM1-203ENST00000333001 EHMT2Q96KQ7 1210 aa20.06■□□□□ 0.8
CMTM1-203ENST00000333001 KCNH8Q96L42 1107 aa20.06■□□□□ 0.8
CMTM1-203ENST00000333001 TEX14Q8IWB6 1497 aa20.05■□□□□ 0.8
CMTM1-203ENST00000333001 KDM4FA0A1W2PPD8 638 aa20.05■□□□□ 0.8
CMTM1-203ENST00000333001 MAP3K4Q9Y6R4 1608 aa20.05■□□□□ 0.8
CMTM1-203ENST00000333001 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.02■□□□□ 0.8
CMTM1-203ENST00000333001 HNRNPUL2Q1KMD3 747 aaKnown RBP20.02■□□□□ 0.8
CMTM1-203ENST00000333001 ARID3CA6NKF2 412 aa20.01■□□□□ 0.79
CMTM1-203ENST00000333001 PPRC1Q5VV67 1664 aaKnown RBP20■□□□□ 0.79
CMTM1-203ENST00000333001 CD109Q6YHK3 1445 aa20■□□□□ 0.79
CMTM1-203ENST00000333001 CFAP43Q8NDM7 1665 aa20■□□□□ 0.79
CMTM1-203ENST00000333001 NUP153P49790 1475 aaKnown RBP19.99■□□□□ 0.79
CMTM1-203ENST00000333001 FMN1Q68DA7 1419 aa19.97■□□□□ 0.79
CMTM1-203ENST00000333001 MAGI3Q5TCQ9 1506 aa19.97■□□□□ 0.79
CMTM1-203ENST00000333001 PLEKHD1A6NEE1 506 aa19.96■□□□□ 0.79
CMTM1-203ENST00000333001 ARHGAP35Q9NRY4 1499 aa19.94■□□□□ 0.78
CMTM1-203ENST00000333001 ADGRL1O94910 1474 aa19.89■□□□□ 0.77
CMTM1-203ENST00000333001 PHLDB1Q86UU1 1377 aa19.89■□□□□ 0.77
CMTM1-203ENST00000333001 ABCA9Q8IUA7 1624 aa19.89■□□□□ 0.77
CMTM1-203ENST00000333001 ATP1B4Q9UN42 357 aaPredicted RBP19.87■□□□□ 0.77
CMTM1-203ENST00000333001 CDK11AQ9UQ88 783 aaPredicted RBP19.87■□□□□ 0.77
CMTM1-203ENST00000333001 COL17A1Q9UMD9 1497 aaPredicted RBP19.86■□□□□ 0.77
CMTM1-203ENST00000333001 HECW1Q76N89 1606 aa19.85■□□□□ 0.77
CMTM1-203ENST00000333001 ARAP3Q8WWN8 1544 aa19.81■□□□□ 0.76
CMTM1-203ENST00000333001 NEO1Q92859 1461 aa19.79■□□□□ 0.76
CMTM1-203ENST00000333001 CDK13Q14004 1512 aaKnown RBP19.79■□□□□ 0.76
CMTM1-203ENST00000333001 CLIP1P30622 1438 aa19.78■□□□□ 0.76
CMTM1-203ENST00000333001 CASKIN1Q8WXD9 1431 aa19.76■□□□□ 0.75
CMTM1-203ENST00000333001 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.74■□□□□ 0.75
CMTM1-203ENST00000333001 ILDR1Q86SU0 546 aaPredicted RBP19.73■□□□□ 0.75
CMTM1-203ENST00000333001 CCDC18Q5T9S5 1454 aa19.73■□□□□ 0.75
CMTM1-203ENST00000333001 CFAP74Q9C0B2 1584 aa19.7■□□□□ 0.74
CMTM1-203ENST00000333001 TROQ12816 1431 aaPredicted RBP19.7■□□□□ 0.74
CMTM1-203ENST00000333001 FANCAO15360 1455 aa19.69■□□□□ 0.74
CMTM1-203ENST00000333001 FYCO1Q9BQS8 1478 aa19.69■□□□□ 0.74
CMTM1-203ENST00000333001 HECW2Q9P2P5 1572 aa19.69■□□□□ 0.74
CMTM1-203ENST00000333001 TTC37Q6PGP7 1564 aa19.68■□□□□ 0.74
CMTM1-203ENST00000333001 PLCH2O75038 1416 aa19.68■□□□□ 0.74
CMTM1-203ENST00000333001 AKNAQ7Z591 1439 aa19.68■□□□□ 0.74
CMTM1-203ENST00000333001 PCF11O94913 1555 aaKnown RBP19.67■□□□□ 0.74
CMTM1-203ENST00000333001 RAPGEF3O95398 923 aa19.66■□□□□ 0.74
CMTM1-203ENST00000333001 KIF14Q15058 1648 aa19.65■□□□□ 0.74
CMTM1-203ENST00000333001 EFCAB2Q5VUJ9 269 aa19.65■□□□□ 0.74
CMTM1-203ENST00000333001 DENND4BO75064 1496 aaPredicted RBP19.65■□□□□ 0.74
CMTM1-203ENST00000333001 LRRIQ1Q96JM4 1722 aa19.65■□□□□ 0.74
CMTM1-203ENST00000333001 CEP162Q5TB80 1403 aa19.62■□□□□ 0.73
CMTM1-203ENST00000333001 MYO5CQ9NQX4 1742 aa19.62■□□□□ 0.73
CMTM1-203ENST00000333001 LOC105371045A0A1W2PR82 267 aa19.56■□□□□ 0.72
CMTM1-203ENST00000333001 SCAPERQ9BY12 1400 aa19.56■□□□□ 0.72
CMTM1-203ENST00000333001 FRMPD1Q5SYB0 1578 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms