RNA–Protein interactions for RNA: ENST00000332512.7

RIPK4-201, Transcript of receptor interacting serine/threonine kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK4, Length 3,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4-201ENST00000332512 DHX57Q6P158 1386 aaKnown RBP18.61■□□□□ 0.57
RIPK4-201ENST00000332512 RBM19Q9Y4C8 960 aaKnown RBP18.58■□□□□ 0.57
RIPK4-201ENST00000332512 DAXXQ9UER7 740 aaPredicted RBP18.57■□□□□ 0.56
RIPK4-201ENST00000332512 MTUS2Q5JR59 1369 aa18.57■□□□□ 0.56
RIPK4-201ENST00000332512 RAB3GAP2Q9H2M9 1393 aa18.57■□□□□ 0.56
RIPK4-201ENST00000332512 MYT1LQ9UL68 1186 aa18.54■□□□□ 0.56
RIPK4-201ENST00000332512 B4GALNT3Q6L9W6 998 aa18.53■□□□□ 0.56
RIPK4-201ENST00000332512 KIF27Q86VH2 1401 aa18.53■□□□□ 0.56
RIPK4-201ENST00000332512 TOP2AP11388 1531 aaKnown RBP18.53■□□□□ 0.56
RIPK4-201ENST00000332512 FOXD1Q16676 465 aa18.51■□□□□ 0.55
RIPK4-201ENST00000332512 KDM2AQ9Y2K7 1162 aa18.49■□□□□ 0.55
RIPK4-201ENST00000332512 CCDC136Q96JN2 1154 aa18.48■□□□□ 0.55
RIPK4-201ENST00000332512 EIF4G2P78344 907 aaKnown RBP eCLIP18.48■□□□□ 0.55
RIPK4-201ENST00000332512 SLC4A1APQ9BWU0 796 aaKnown RBP18.48■□□□□ 0.55
RIPK4-201ENST00000332512 ANP32AP39687 249 aaKnown RBP18.44■□□□□ 0.54
RIPK4-201ENST00000332512 BCL11AQ9H165 835 aa18.43■□□□□ 0.54
RIPK4-201ENST00000332512 TMC1Q8TDI8 760 aa18.41■□□□□ 0.54
RIPK4-201ENST00000332512 SMARCA2P51531 1590 aa18.41■□□□□ 0.54
RIPK4-201ENST00000332512 SETD5Q9C0A6 1442 aa18.4■□□□□ 0.54
RIPK4-201ENST00000332512 CUX2O14529 1486 aa18.4■□□□□ 0.54
RIPK4-201ENST00000332512 PPP1R15AO75807 674 aaPredicted RBP18.39■□□□□ 0.53
RIPK4-201ENST00000332512 CARMIL1Q5VZK9 1371 aa18.38■□□□□ 0.53
RIPK4-201ENST00000332512 SMARCA4P51532 1647 aa18.37■□□□□ 0.53
RIPK4-201ENST00000332512 HSPA5P11021 654 aaKnown RBP18.34■□□□□ 0.53
RIPK4-201ENST00000332512 ZBTB47Q9UFB7 747 aaPredicted RBP18.29■□□□□ 0.52
RIPK4-201ENST00000332512 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.29■□□□□ 0.523e-6■■□□□ 11.4
RIPK4-201ENST00000332512 CCER2I3L3R5 266 aa18.27■□□□□ 0.52
RIPK4-201ENST00000332512 KIF21BO75037 1637 aa18.27■□□□□ 0.51
RIPK4-201ENST00000332512 RGL3Q3MIN7 710 aa18.26■□□□□ 0.51
RIPK4-201ENST00000332512 PPP4R2Q9NY27 417 aa18.26■□□□□ 0.51
RIPK4-201ENST00000332512 FHOD3Q2V2M9 1422 aa18.24■□□□□ 0.51
RIPK4-201ENST00000332512 RTN4Q9NQC3 1192 aaKnown RBP18.24■□□□□ 0.51
RIPK4-201ENST00000332512 ATAD2BQ9ULI0 1458 aa18.23■□□□□ 0.51
RIPK4-201ENST00000332512 SYNJ1O43426 1573 aa18.2■□□□□ 0.5
RIPK4-201ENST00000332512 LAS1LQ9Y4W2 734 aaKnown RBP18.2■□□□□ 0.5
RIPK4-201ENST00000332512 ARAP1Q96P48 1450 aa18.2■□□□□ 0.5
RIPK4-201ENST00000332512 L3MBTL2Q969R5 705 aa18.18■□□□□ 0.5
RIPK4-201ENST00000332512 PHLDB1Q86UU1 1377 aa18.16■□□□□ 0.5
RIPK4-201ENST00000332512 ARXQ96QS3 562 aa18.16■□□□□ 0.5
RIPK4-201ENST00000332512 SENP3Q9H4L4 574 aaPredicted RBP18.15■□□□□ 0.5
RIPK4-201ENST00000332512 FHAD1B1AJZ9 1412 aa18.15■□□□□ 0.5
RIPK4-201ENST00000332512 TDRD9Q8NDG6 1382 aaKnown RBP18.14■□□□□ 0.49
RIPK4-201ENST00000332512 TIMELESSQ9UNS1 1208 aa18.14■□□□□ 0.49
RIPK4-201ENST00000332512 ARHGAP35Q9NRY4 1499 aa18.13■□□□□ 0.49
RIPK4-201ENST00000332512 EIF5BO60841 1220 aaKnown RBP18.13■□□□□ 0.49
RIPK4-201ENST00000332512 DEKP35659 375 aaKnown RBP18.13■□□□□ 0.49
RIPK4-201ENST00000332512 CANXP27824 592 aaKnown RBP18.12■□□□□ 0.49
RIPK4-201ENST00000332512 CARD11Q9BXL7 1154 aa18.12■□□□□ 0.49
RIPK4-201ENST00000332512 NOP58Q9Y2X3 529 aaKnown RBP18.12■□□□□ 0.49
RIPK4-201ENST00000332512 MPHOSPH9Q99550 1183 aa18.11■□□□□ 0.49
RIPK4-201ENST00000332512 CFDP1Q9UEE9 299 aaPredicted RBP18.09■□□□□ 0.49
RIPK4-201ENST00000332512 CCDC184Q52MB2 194 aa18.08■□□□□ 0.48
RIPK4-201ENST00000332512 TSPY4P0CV99 314 aa18.06■□□□□ 0.48
RIPK4-201ENST00000332512 TSPY10P0CW01 314 aa18.06■□□□□ 0.48
RIPK4-201ENST00000332512 CC2D1BQ5T0F9 858 aaKnown RBP18.06■□□□□ 0.48
RIPK4-201ENST00000332512 IGF1RP08069 1367 aa18.06■□□□□ 0.48
RIPK4-201ENST00000332512 DCAF11Q8TEB1 546 aa18.02■□□□□ 0.47
RIPK4-201ENST00000332512 EIF4G1Q04637 1599 aaKnown RBP18.01■□□□□ 0.47
RIPK4-201ENST00000332512 PRKRIP1Q9H875 184 aaPredicted RBP18■□□□□ 0.47
RIPK4-201ENST00000332512 NEFMP07197 916 aa17.99■□□□□ 0.47
RIPK4-201ENST00000332512 CHGAP10645 457 aaKnown RBP17.99■□□□□ 0.47
RIPK4-201ENST00000332512 PKD2Q13563 968 aa17.98■□□□□ 0.47
RIPK4-201ENST00000332512 CHMP7Q8WUX9 453 aaPredicted RBP17.98■□□□□ 0.47
RIPK4-201ENST00000332512 WASHC2AQ641Q2 1341 aa17.98■□□□□ 0.47
RIPK4-201ENST00000332512 WDR97A6NE52 1622 aa17.98■□□□□ 0.47
RIPK4-201ENST00000332512 RGS3P49796 1198 aa17.98■□□□□ 0.47
RIPK4-201ENST00000332512 RRBP1Q9P2E9 1410 aaKnown RBP17.97■□□□□ 0.47
RIPK4-201ENST00000332512 WDR43Q15061 677 aaKnown RBP eCLIP17.95■□□□□ 0.46
RIPK4-201ENST00000332512 MSH5O43196 834 aa17.93■□□□□ 0.46
RIPK4-201ENST00000332512 NEUROD2Q15784 382 aa17.92■□□□□ 0.46
RIPK4-201ENST00000332512 CCDC18Q5T9S5 1454 aa17.92■□□□□ 0.46
RIPK4-201ENST00000332512 PRXQ9BXM0 1461 aa17.91■□□□□ 0.46
RIPK4-201ENST00000332512 ZNF644Q9H582 1327 aaPredicted RBP17.91■□□□□ 0.46
RIPK4-201ENST00000332512 FMN1Q68DA7 1419 aa17.91■□□□□ 0.46
RIPK4-201ENST00000332512 LRRC9Q6ZRR7 1453 aa17.9■□□□□ 0.46
RIPK4-201ENST00000332512 PLIN1O60240 522 aa17.89■□□□□ 0.45
RIPK4-201ENST00000332512 CADPSQ9ULU8 1353 aa17.89■□□□□ 0.45
RIPK4-201ENST00000332512 PLEKHD1A6NEE1 506 aa17.89■□□□□ 0.45
RIPK4-201ENST00000332512 RAD54L2Q9Y4B4 1467 aa17.88■□□□□ 0.45
RIPK4-201ENST00000332512 TNNT2P45379 298 aaPredicted RBP17.86■□□□□ 0.45
RIPK4-201ENST00000332512 NUDCQ9Y266 331 aa17.86■□□□□ 0.45
RIPK4-201ENST00000332512 SLC4A3P48751 1232 aa17.84■□□□□ 0.45
RIPK4-201ENST00000332512 PAK3O75914 559 aaPredicted RBP17.84■□□□□ 0.45
RIPK4-201ENST00000332512 ST20-MTHFSA0A0A6YYL1 179 aa17.84■□□□□ 0.45
RIPK4-201ENST00000332512 C11orf95C9JLR9 678 aaPredicted RBP17.83■□□□□ 0.45
RIPK4-201ENST00000332512 RCAN3Q9UKA8 241 aa17.83■□□□□ 0.45
RIPK4-201ENST00000332512 EXOC6Q8TAG9 804 aa17.83■□□□□ 0.44
RIPK4-201ENST00000332512 FGD5Q6ZNL6 1462 aa17.82■□□□□ 0.44
RIPK4-201ENST00000332512 KIF7Q2M1P5 1343 aa17.81■□□□□ 0.44
RIPK4-201ENST00000332512 FGD6Q6ZV73 1430 aa17.81■□□□□ 0.44
RIPK4-201ENST00000332512 NBPF8Q3BBV2 869 aa17.81■□□□□ 0.44
RIPK4-201ENST00000332512 IPO9Q96P70 1041 aaKnown RBP17.8■□□□□ 0.44
RIPK4-201ENST00000332512 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.79■□□□□ 0.44
RIPK4-201ENST00000332512 FANCIQ9NVI1 1328 aa17.79■□□□□ 0.44
RIPK4-201ENST00000332512 ZBED9Q6R2W3 1325 aa17.79■□□□□ 0.44
RIPK4-201ENST00000332512 KNSTRNQ9Y448 316 aa17.78■□□□□ 0.44
RIPK4-201ENST00000332512 CUX1P39880 1505 aa17.78■□□□□ 0.44
RIPK4-201ENST00000332512 FRAT1Q92837 279 aaPredicted RBP17.77■□□□□ 0.44
RIPK4-201ENST00000332512 NUP155O75694 1391 aa17.77■□□□□ 0.44
RIPK4-201ENST00000332512 ERICH6BQ5W0A0 696 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms