RNA–Protein interactions for RNA: ENST00000332512.7

RIPK4-201, Transcript of receptor interacting serine/threonine kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK4, Length 3,889 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4-201ENST00000332512 DHX57Q6P158 1386 aaKnown RBP18.61■□□□□ 0.57
RIPK4-201ENST00000332512 RBM19Q9Y4C8 960 aaKnown RBP18.58■□□□□ 0.57
RIPK4-201ENST00000332512 DAXXQ9UER7 740 aaPredicted RBP18.57■□□□□ 0.56
RIPK4-201ENST00000332512 MTUS2Q5JR59 1369 aa18.57■□□□□ 0.56
RIPK4-201ENST00000332512 RAB3GAP2Q9H2M9 1393 aa18.57■□□□□ 0.56
RIPK4-201ENST00000332512 MYT1LQ9UL68 1186 aa18.54■□□□□ 0.56
RIPK4-201ENST00000332512 B4GALNT3Q6L9W6 998 aa18.53■□□□□ 0.56
RIPK4-201ENST00000332512 KIF27Q86VH2 1401 aa18.53■□□□□ 0.56
RIPK4-201ENST00000332512 TOP2AP11388 1531 aaKnown RBP18.53■□□□□ 0.56
RIPK4-201ENST00000332512 FOXD1Q16676 465 aa18.51■□□□□ 0.55
RIPK4-201ENST00000332512 KDM2AQ9Y2K7 1162 aa18.49■□□□□ 0.55
RIPK4-201ENST00000332512 CCDC136Q96JN2 1154 aa18.48■□□□□ 0.55
RIPK4-201ENST00000332512 EIF4G2P78344 907 aaKnown RBP eCLIP18.48■□□□□ 0.55
RIPK4-201ENST00000332512 SLC4A1APQ9BWU0 796 aaKnown RBP18.48■□□□□ 0.55
RIPK4-201ENST00000332512 ANP32AP39687 249 aaKnown RBP18.44■□□□□ 0.54
RIPK4-201ENST00000332512 BCL11AQ9H165 835 aa18.43■□□□□ 0.54
RIPK4-201ENST00000332512 TMC1Q8TDI8 760 aa18.41■□□□□ 0.54
RIPK4-201ENST00000332512 SMARCA2P51531 1590 aa18.41■□□□□ 0.54
RIPK4-201ENST00000332512 SETD5Q9C0A6 1442 aa18.4■□□□□ 0.54
RIPK4-201ENST00000332512 CUX2O14529 1486 aa18.4■□□□□ 0.54
RIPK4-201ENST00000332512 PPP1R15AO75807 674 aaPredicted RBP18.39■□□□□ 0.53
RIPK4-201ENST00000332512 CARMIL1Q5VZK9 1371 aa18.38■□□□□ 0.53
RIPK4-201ENST00000332512 SMARCA4P51532 1647 aa18.37■□□□□ 0.53
RIPK4-201ENST00000332512 HSPA5P11021 654 aaKnown RBP18.34■□□□□ 0.53
RIPK4-201ENST00000332512 ZBTB47Q9UFB7 747 aaPredicted RBP18.29■□□□□ 0.52
RIPK4-201ENST00000332512 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.29■□□□□ 0.523e-6■■□□□ 11.4
RIPK4-201ENST00000332512 CCER2I3L3R5 266 aa18.27■□□□□ 0.52
RIPK4-201ENST00000332512 KIF21BO75037 1637 aa18.27■□□□□ 0.51
RIPK4-201ENST00000332512 RGL3Q3MIN7 710 aa18.26■□□□□ 0.51
RIPK4-201ENST00000332512 PPP4R2Q9NY27 417 aa18.26■□□□□ 0.51
RIPK4-201ENST00000332512 FHOD3Q2V2M9 1422 aa18.24■□□□□ 0.51
RIPK4-201ENST00000332512 RTN4Q9NQC3 1192 aaKnown RBP18.24■□□□□ 0.51
RIPK4-201ENST00000332512 ATAD2BQ9ULI0 1458 aa18.23■□□□□ 0.51
RIPK4-201ENST00000332512 SYNJ1O43426 1573 aa18.2■□□□□ 0.5
RIPK4-201ENST00000332512 LAS1LQ9Y4W2 734 aaKnown RBP18.2■□□□□ 0.5
RIPK4-201ENST00000332512 ARAP1Q96P48 1450 aa18.2■□□□□ 0.5
RIPK4-201ENST00000332512 L3MBTL2Q969R5 705 aa18.18■□□□□ 0.5
RIPK4-201ENST00000332512 PHLDB1Q86UU1 1377 aa18.16■□□□□ 0.5
RIPK4-201ENST00000332512 ARXQ96QS3 562 aa18.16■□□□□ 0.5
RIPK4-201ENST00000332512 SENP3Q9H4L4 574 aaPredicted RBP18.15■□□□□ 0.5
RIPK4-201ENST00000332512 FHAD1B1AJZ9 1412 aa18.15■□□□□ 0.5
RIPK4-201ENST00000332512 TDRD9Q8NDG6 1382 aaKnown RBP18.14■□□□□ 0.49
RIPK4-201ENST00000332512 TIMELESSQ9UNS1 1208 aa18.14■□□□□ 0.49
RIPK4-201ENST00000332512 ARHGAP35Q9NRY4 1499 aa18.13■□□□□ 0.49
RIPK4-201ENST00000332512 EIF5BO60841 1220 aaKnown RBP18.13■□□□□ 0.49
RIPK4-201ENST00000332512 DEKP35659 375 aaKnown RBP18.13■□□□□ 0.49
RIPK4-201ENST00000332512 CANXP27824 592 aaKnown RBP18.12■□□□□ 0.49
RIPK4-201ENST00000332512 CARD11Q9BXL7 1154 aa18.12■□□□□ 0.49
RIPK4-201ENST00000332512 NOP58Q9Y2X3 529 aaKnown RBP18.12■□□□□ 0.49
RIPK4-201ENST00000332512 MPHOSPH9Q99550 1183 aa18.11■□□□□ 0.49
RIPK4-201ENST00000332512 CFDP1Q9UEE9 299 aaPredicted RBP18.09■□□□□ 0.49
RIPK4-201ENST00000332512 CCDC184Q52MB2 194 aa18.08■□□□□ 0.48
RIPK4-201ENST00000332512 TSPY4P0CV99 314 aa18.06■□□□□ 0.48
RIPK4-201ENST00000332512 TSPY10P0CW01 314 aa18.06■□□□□ 0.48
RIPK4-201ENST00000332512 CC2D1BQ5T0F9 858 aaKnown RBP18.06■□□□□ 0.48
RIPK4-201ENST00000332512 IGF1RP08069 1367 aa18.06■□□□□ 0.48
RIPK4-201ENST00000332512 DCAF11Q8TEB1 546 aa18.02■□□□□ 0.47
RIPK4-201ENST00000332512 EIF4G1Q04637 1599 aaKnown RBP18.01■□□□□ 0.47
RIPK4-201ENST00000332512 PRKRIP1Q9H875 184 aaPredicted RBP18■□□□□ 0.47
RIPK4-201ENST00000332512 NEFMP07197 916 aa17.99■□□□□ 0.47
RIPK4-201ENST00000332512 CHGAP10645 457 aaKnown RBP17.99■□□□□ 0.47
RIPK4-201ENST00000332512 PKD2Q13563 968 aa17.98■□□□□ 0.47
RIPK4-201ENST00000332512 CHMP7Q8WUX9 453 aaPredicted RBP17.98■□□□□ 0.47
RIPK4-201ENST00000332512 WASHC2AQ641Q2 1341 aa17.98■□□□□ 0.47
RIPK4-201ENST00000332512 WDR97A6NE52 1622 aa17.98■□□□□ 0.47
RIPK4-201ENST00000332512 RGS3P49796 1198 aa17.98■□□□□ 0.47
RIPK4-201ENST00000332512 RRBP1Q9P2E9 1410 aaKnown RBP17.97■□□□□ 0.47
RIPK4-201ENST00000332512 WDR43Q15061 677 aaKnown RBP eCLIP17.95■□□□□ 0.46
RIPK4-201ENST00000332512 MSH5O43196 834 aa17.93■□□□□ 0.46
RIPK4-201ENST00000332512 NEUROD2Q15784 382 aa17.92■□□□□ 0.46
RIPK4-201ENST00000332512 CCDC18Q5T9S5 1454 aa17.92■□□□□ 0.46
RIPK4-201ENST00000332512 PRXQ9BXM0 1461 aa17.91■□□□□ 0.46
RIPK4-201ENST00000332512 ZNF644Q9H582 1327 aaPredicted RBP17.91■□□□□ 0.46
RIPK4-201ENST00000332512 FMN1Q68DA7 1419 aa17.91■□□□□ 0.46
RIPK4-201ENST00000332512 LRRC9Q6ZRR7 1453 aa17.9■□□□□ 0.46
RIPK4-201ENST00000332512 PLIN1O60240 522 aa17.89■□□□□ 0.45
RIPK4-201ENST00000332512 CADPSQ9ULU8 1353 aa17.89■□□□□ 0.45
RIPK4-201ENST00000332512 PLEKHD1A6NEE1 506 aa17.89■□□□□ 0.45
RIPK4-201ENST00000332512 RAD54L2Q9Y4B4 1467 aa17.88■□□□□ 0.45
RIPK4-201ENST00000332512 TNNT2P45379 298 aaPredicted RBP17.86■□□□□ 0.45
RIPK4-201ENST00000332512 NUDCQ9Y266 331 aa17.86■□□□□ 0.45
RIPK4-201ENST00000332512 SLC4A3P48751 1232 aa17.84■□□□□ 0.45
RIPK4-201ENST00000332512 PAK3O75914 559 aaPredicted RBP17.84■□□□□ 0.45
RIPK4-201ENST00000332512 ST20-MTHFSA0A0A6YYL1 179 aa17.84■□□□□ 0.45
RIPK4-201ENST00000332512 C11orf95C9JLR9 678 aaPredicted RBP17.83■□□□□ 0.45
RIPK4-201ENST00000332512 RCAN3Q9UKA8 241 aa17.83■□□□□ 0.45
RIPK4-201ENST00000332512 EXOC6Q8TAG9 804 aa17.83■□□□□ 0.44
RIPK4-201ENST00000332512 FGD5Q6ZNL6 1462 aa17.82■□□□□ 0.44
RIPK4-201ENST00000332512 KIF7Q2M1P5 1343 aa17.81■□□□□ 0.44
RIPK4-201ENST00000332512 FGD6Q6ZV73 1430 aa17.81■□□□□ 0.44
RIPK4-201ENST00000332512 NBPF8Q3BBV2 869 aa17.81■□□□□ 0.44
RIPK4-201ENST00000332512 IPO9Q96P70 1041 aaKnown RBP17.8■□□□□ 0.44
RIPK4-201ENST00000332512 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.79■□□□□ 0.44
RIPK4-201ENST00000332512 FANCIQ9NVI1 1328 aa17.79■□□□□ 0.44
RIPK4-201ENST00000332512 ZBED9Q6R2W3 1325 aa17.79■□□□□ 0.44
RIPK4-201ENST00000332512 KNSTRNQ9Y448 316 aa17.78■□□□□ 0.44
RIPK4-201ENST00000332512 CUX1P39880 1505 aa17.78■□□□□ 0.44
RIPK4-201ENST00000332512 FRAT1Q92837 279 aaPredicted RBP17.77■□□□□ 0.44
RIPK4-201ENST00000332512 NUP155O75694 1391 aa17.77■□□□□ 0.44
RIPK4-201ENST00000332512 ERICH6BQ5W0A0 696 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms