RNA–Protein interactions for RNA: ENST00000332246.10

CSGALNACT1-201, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 3,872 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-201ENST00000332246 MTUS2Q5JR59 1369 aa13.48□□□□□ -0.25
CSGALNACT1-201ENST00000332246 SENP3Q9H4L4 574 aaPredicted RBP13.47□□□□□ -0.25
CSGALNACT1-201ENST00000332246 TSHZ2Q9NRE2 1034 aa13.47□□□□□ -0.25
CSGALNACT1-201ENST00000332246 EEA1Q15075 1411 aa13.47□□□□□ -0.25
CSGALNACT1-201ENST00000332246 B4GALNT3Q6L9W6 998 aa13.46□□□□□ -0.25
CSGALNACT1-201ENST00000332246 ANP32EQ9BTT0 268 aa13.46□□□□□ -0.26
CSGALNACT1-201ENST00000332246 CCNB3Q8WWL7 1395 aa13.44□□□□□ -0.26
CSGALNACT1-201ENST00000332246 VPS8Q8N3P4 1428 aa13.44□□□□□ -0.26
CSGALNACT1-201ENST00000332246 CCDC136Q96JN2 1154 aa13.43□□□□□ -0.26
CSGALNACT1-201ENST00000332246 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.43□□□□□ -0.26
CSGALNACT1-201ENST00000332246 RAPGEF2Q9Y4G8 1499 aa13.43□□□□□ -0.26
CSGALNACT1-201ENST00000332246 TMC1Q8TDI8 760 aa13.41□□□□□ -0.26
CSGALNACT1-201ENST00000332246 RBM19Q9Y4C8 960 aaKnown RBP13.4□□□□□ -0.26
CSGALNACT1-201ENST00000332246 TOP2AP11388 1531 aaKnown RBP13.4□□□□□ -0.26
CSGALNACT1-201ENST00000332246 EIF4G2P78344 907 aaKnown RBP eCLIP13.4□□□□□ -0.26
CSGALNACT1-201ENST00000332246 RAB3GAP2Q9H2M9 1393 aa13.38□□□□□ -0.27
CSGALNACT1-201ENST00000332246 SMARCA4P51532 1647 aa13.38□□□□□ -0.27
CSGALNACT1-201ENST00000332246 RGL3Q3MIN7 710 aa13.38□□□□□ -0.27
CSGALNACT1-201ENST00000332246 ANP32AP39687 249 aaKnown RBP13.37□□□□□ -0.27
CSGALNACT1-201ENST00000332246 DHX57Q6P158 1386 aaKnown RBP13.36□□□□□ -0.27
CSGALNACT1-201ENST00000332246 KIF27Q86VH2 1401 aa13.35□□□□□ -0.27
CSGALNACT1-201ENST00000332246 ARXQ96QS3 562 aa13.33□□□□□ -0.28
CSGALNACT1-201ENST00000332246 ATAD2BQ9ULI0 1458 aa13.31□□□□□ -0.28
CSGALNACT1-201ENST00000332246 CUX2O14529 1486 aa13.3□□□□□ -0.28
CSGALNACT1-201ENST00000332246 HSPA5P11021 654 aaKnown RBP13.29□□□□□ -0.28
CSGALNACT1-201ENST00000332246 RTN4Q9NQC3 1192 aaKnown RBP13.29□□□□□ -0.28
CSGALNACT1-201ENST00000332246 CARMIL1Q5VZK9 1371 aa13.28□□□□□ -0.28
CSGALNACT1-201ENST00000332246 PPP1R15AO75807 674 aaPredicted RBP13.27□□□□□ -0.28
CSGALNACT1-201ENST00000332246 ZBTB47Q9UFB7 747 aaPredicted RBP13.27□□□□□ -0.28
CSGALNACT1-201ENST00000332246 SMARCA2P51531 1590 aa13.26□□□□□ -0.29
CSGALNACT1-201ENST00000332246 CHGAP10645 457 aaKnown RBP13.26□□□□□ -0.29
CSGALNACT1-201ENST00000332246 CANXP27824 592 aaKnown RBP13.26□□□□□ -0.29
CSGALNACT1-201ENST00000332246 SETD5Q9C0A6 1442 aa13.25□□□□□ -0.29
CSGALNACT1-201ENST00000332246 LAS1LQ9Y4W2 734 aaKnown RBP13.25□□□□□ -0.29
CSGALNACT1-201ENST00000332246 EIF5BO60841 1220 aaKnown RBP13.23□□□□□ -0.29
CSGALNACT1-201ENST00000332246 TDRD9Q8NDG6 1382 aaKnown RBP13.19□□□□□ -0.3
CSGALNACT1-201ENST00000332246 PPP4R2Q9NY27 417 aa13.18□□□□□ -0.3
CSGALNACT1-201ENST00000332246 FHOD3Q2V2M9 1422 aa13.18□□□□□ -0.3
CSGALNACT1-201ENST00000332246 L3MBTL2Q969R5 705 aa13.18□□□□□ -0.3
CSGALNACT1-201ENST00000332246 CARD11Q9BXL7 1154 aa13.18□□□□□ -0.3
CSGALNACT1-201ENST00000332246 TSPY4P0CV99 314 aa13.18□□□□□ -0.3
CSGALNACT1-201ENST00000332246 TSPY10P0CW01 314 aa13.18□□□□□ -0.3
CSGALNACT1-201ENST00000332246 CC2D1BQ5T0F9 858 aaKnown RBP13.18□□□□□ -0.3
CSGALNACT1-201ENST00000332246 CFDP1Q9UEE9 299 aaPredicted RBP13.17□□□□□ -0.3
CSGALNACT1-201ENST00000332246 CHMP7Q8WUX9 453 aaPredicted RBP13.15□□□□□ -0.3
CSGALNACT1-201ENST00000332246 NEUROD2Q15784 382 aa13.14□□□□□ -0.31
CSGALNACT1-201ENST00000332246 CCER2I3L3R5 266 aa13.13□□□□□ -0.31
CSGALNACT1-201ENST00000332246 DCAF11Q8TEB1 546 aa13.13□□□□□ -0.31
CSGALNACT1-201ENST00000332246 MPHOSPH9Q99550 1183 aa13.12□□□□□ -0.31
CSGALNACT1-201ENST00000332246 RGS3P49796 1198 aa13.12□□□□□ -0.31
CSGALNACT1-201ENST00000332246 TNNT2P45379 298 aaPredicted RBP13.11□□□□□ -0.31
CSGALNACT1-201ENST00000332246 DEKP35659 375 aaKnown RBP13.09□□□□□ -0.31
CSGALNACT1-201ENST00000332246 CCDC184Q52MB2 194 aa13.09□□□□□ -0.31
CSGALNACT1-201ENST00000332246 CADPSQ9ULU8 1353 aa13.08□□□□□ -0.32
CSGALNACT1-201ENST00000332246 WDR43Q15061 677 aaKnown RBP eCLIP13.08□□□□□ -0.32
CSGALNACT1-201ENST00000332246 NOP58Q9Y2X3 529 aaKnown RBP13.08□□□□□ -0.32
CSGALNACT1-201ENST00000332246 SLC24A1O60721 1099 aa13.08□□□□□ -0.32
CSGALNACT1-201ENST00000332246 PKD2Q13563 968 aa13.08□□□□□ -0.32
CSGALNACT1-201ENST00000332246 EIF4G1Q04637 1599 aaKnown RBP13.07□□□□□ -0.32
CSGALNACT1-201ENST00000332246 PHLDB1Q86UU1 1377 aa13.07□□□□□ -0.32
CSGALNACT1-201ENST00000332246 KIF21BO75037 1637 aa13.06□□□□□ -0.32
CSGALNACT1-201ENST00000332246 ARHGAP35Q9NRY4 1499 aa13.05□□□□□ -0.32
CSGALNACT1-201ENST00000332246 PLPPR3Q6T4P5 718 aa13.05□□□□□ -0.32
CSGALNACT1-201ENST00000332246 ARAP1Q96P48 1450 aa13.05□□□□□ -0.32
CSGALNACT1-201ENST00000332246 BICRAQ9NZM4 1560 aa13.05□□□□□ -0.32
CSGALNACT1-201ENST00000332246 FHAD1B1AJZ9 1412 aa13.04□□□□□ -0.32
CSGALNACT1-201ENST00000332246 PLEKHD1A6NEE1 506 aa13.04□□□□□ -0.32
CSGALNACT1-201ENST00000332246 NEFMP07197 916 aa13.04□□□□□ -0.32
CSGALNACT1-201ENST00000332246 SYNJ1O43426 1573 aa13.02□□□□□ -0.33
CSGALNACT1-201ENST00000332246 PLIN1O60240 522 aa13.02□□□□□ -0.33
CSGALNACT1-201ENST00000332246 ZNF644Q9H582 1327 aaPredicted RBP13.01□□□□□ -0.33
CSGALNACT1-201ENST00000332246 TIMELESSQ9UNS1 1208 aa13□□□□□ -0.33
CSGALNACT1-201ENST00000332246 PRKRIP1Q9H875 184 aaPredicted RBP13□□□□□ -0.33
CSGALNACT1-201ENST00000332246 NCAPD3P42695 1498 aa13□□□□□ -0.33
CSGALNACT1-201ENST00000332246 IGF1RP08069 1367 aa12.99□□□□□ -0.33
CSGALNACT1-201ENST00000332246 SLC4A3P48751 1232 aa12.99□□□□□ -0.33
CSGALNACT1-201ENST00000332246 FRAT1Q92837 279 aaPredicted RBP12.99□□□□□ -0.33
CSGALNACT1-201ENST00000332246 WASHC2AQ641Q2 1341 aa12.96□□□□□ -0.33
CSGALNACT1-201ENST00000332246 SPRYD3Q8NCJ5 442 aa12.96□□□□□ -0.34
CSGALNACT1-201ENST00000332246 ST20-MTHFSA0A0A6YYL1 179 aa12.95□□□□□ -0.34
CSGALNACT1-201ENST00000332246 PLEKHG5O94827 1062 aa12.95□□□□□ -0.34
CSGALNACT1-201ENST00000332246 KNSTRNQ9Y448 316 aa12.94□□□□□ -0.34
CSGALNACT1-201ENST00000332246 HNRNPMP52272 730 aaKnown RBP eCLIP12.93□□□□□ -0.34
CSGALNACT1-201ENST00000332246 RAD54L2Q9Y4B4 1467 aa12.93□□□□□ -0.34
CSGALNACT1-201ENST00000332246 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.93□□□□□ -0.34
CSGALNACT1-201ENST00000332246 UNC13AQ9UPW8 1703 aa12.93□□□□□ -0.34
CSGALNACT1-201ENST00000332246 EXOC6Q8TAG9 804 aa12.92□□□□□ -0.34
CSGALNACT1-201ENST00000332246 SAFB2Q14151 953 aaKnown RBP eCLIP12.92□□□□□ -0.34
CSGALNACT1-201ENST00000332246 PPM1GO15355 546 aaPredicted RBP12.92□□□□□ -0.34
CSGALNACT1-201ENST00000332246 RCAN3Q9UKA8 241 aa12.92□□□□□ -0.34
CSGALNACT1-201ENST00000332246 HSP90AA1P07900 732 aaKnown RBP12.91□□□□□ -0.34
CSGALNACT1-201ENST00000332246 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.91□□□□□ -0.34
CSGALNACT1-201ENST00000332246 FANCD2Q9BXW9 1451 aa12.91□□□□□ -0.34
CSGALNACT1-201ENST00000332246 CCDC146Q8IYE0 955 aa12.9□□□□□ -0.34
CSGALNACT1-201ENST00000332246 NUP155O75694 1391 aa12.9□□□□□ -0.34
CSGALNACT1-201ENST00000332246 WDR97A6NE52 1622 aa12.9□□□□□ -0.35
CSGALNACT1-201ENST00000332246 FMN1Q68DA7 1419 aa12.89□□□□□ -0.35
CSGALNACT1-201ENST00000332246 NUDCQ9Y266 331 aa12.89□□□□□ -0.35
CSGALNACT1-201ENST00000332246 C11orf95C9JLR9 678 aaPredicted RBP12.88□□□□□ -0.35
CSGALNACT1-201ENST00000332246 CCDC18Q5T9S5 1454 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms