RNA–Protein interactions for RNA: ENST00000332118.10

SRPRA-201, Transcript of SRP receptor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRPRA, Length 3,069 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-201ENST00000332118 ADAMTS12P58397 1594 aa21.03■□□□□ 0.96
SRPRA-201ENST00000332118 IFT140Q96RY7 1462 aa21.01■□□□□ 0.95
SRPRA-201ENST00000332118 FHAD1B1AJZ9 1412 aa20.99■□□□□ 0.95
SRPRA-201ENST00000332118 RRBP1Q9P2E9 1410 aaKnown RBP20.99■□□□□ 0.95
SRPRA-201ENST00000332118 FYCO1Q9BQS8 1478 aa20.97■□□□□ 0.95
SRPRA-201ENST00000332118 PCF11O94913 1555 aaKnown RBP20.97■□□□□ 0.95
SRPRA-201ENST00000332118 TDRD9Q8NDG6 1382 aaKnown RBP20.91■□□□□ 0.94
SRPRA-201ENST00000332118 GRIN2BQ13224 1484 aa20.91■□□□□ 0.94
SRPRA-201ENST00000332118 CASKIN1Q8WXD9 1431 aa20.91■□□□□ 0.94
SRPRA-201ENST00000332118 SNAPC4Q5SXM2 1469 aa20.9■□□□□ 0.94
SRPRA-201ENST00000332118 APLP2Q06481 763 aa20.87■□□□□ 0.93
SRPRA-201ENST00000332118 LRRC9Q6ZRR7 1453 aa20.87■□□□□ 0.93
SRPRA-201ENST00000332118 EIF4G3O43432 1585 aaKnown RBP20.85■□□□□ 0.93
SRPRA-201ENST00000332118 FMN1Q68DA7 1419 aa20.84■□□□□ 0.93
SRPRA-201ENST00000332118 LRRIQ1Q96JM4 1722 aa20.84■□□□□ 0.93
SRPRA-201ENST00000332118 IQGAP2Q13576 1575 aa20.82■□□□□ 0.92
SRPRA-201ENST00000332118 KANK4Q5T7N3 995 aaPredicted RBP20.81■□□□□ 0.92
SRPRA-201ENST00000332118 UGGT2Q9NYU1 1516 aa20.81■□□□□ 0.92
SRPRA-201ENST00000332118 FHOD3Q2V2M9 1422 aa20.78■□□□□ 0.92
SRPRA-201ENST00000332118 ZNF608Q9ULD9 1512 aaPredicted RBP20.77■□□□□ 0.91
SRPRA-201ENST00000332118 MAGI1Q96QZ7 1491 aaPredicted RBP20.75■□□□□ 0.91
SRPRA-201ENST00000332118 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.74■□□□□ 0.91
SRPRA-201ENST00000332118 CCNB3Q8WWL7 1395 aa20.71■□□□□ 0.91
SRPRA-201ENST00000332118 RANGAP1P46060 587 aaPredicted RBP20.71■□□□□ 0.91
SRPRA-201ENST00000332118 ERCC6Q03468 1493 aa20.7■□□□□ 0.9
SRPRA-201ENST00000332118 ARHGEF11O15085 1522 aa20.69■□□□□ 0.9
SRPRA-201ENST00000332118 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.69■□□□□ 0.9
SRPRA-201ENST00000332118 KIAA0586Q9BVV6 1533 aa20.68■□□□□ 0.9
SRPRA-201ENST00000332118 GRIN2AQ12879 1464 aa20.68■□□□□ 0.9
SRPRA-201ENST00000332118 HECW1Q76N89 1606 aa20.67■□□□□ 0.9
SRPRA-201ENST00000332118 CCDC18Q5T9S5 1454 aa20.66■□□□□ 0.9
SRPRA-201ENST00000332118 TTBK1Q5TCY1 1321 aaPredicted RBP20.66■□□□□ 0.9
SRPRA-201ENST00000332118 CCER1Q8TC90 406 aaPredicted RBP20.65■□□□□ 0.9
SRPRA-201ENST00000332118 KIAA0556O60303 1618 aa20.65■□□□□ 0.9
SRPRA-201ENST00000332118 CLSPNQ9HAW4 1339 aa20.65■□□□□ 0.9
SRPRA-201ENST00000332118 EHBP1L1Q8N3D4 1523 aa20.64■□□□□ 0.89
SRPRA-201ENST00000332118 SYNJ2O15056 1496 aa20.63■□□□□ 0.89
SRPRA-201ENST00000332118 PHLDB1Q86UU1 1377 aa20.62■□□□□ 0.89
SRPRA-201ENST00000332118 DISP1Q96F81 1524 aa20.6■□□□□ 0.89
SRPRA-201ENST00000332118 SUPT6HQ7KZ85 1726 aaKnown RBP20.6■□□□□ 0.89
SRPRA-201ENST00000332118 CEP170Q5SW79 1584 aa20.59■□□□□ 0.89
SRPRA-201ENST00000332118 NUP160Q12769 1436 aa20.58■□□□□ 0.88
SRPRA-201ENST00000332118 MAGI3Q5TCQ9 1506 aa20.53■□□□□ 0.88
SRPRA-201ENST00000332118 DHX57Q6P158 1386 aaKnown RBP20.53■□□□□ 0.88
SRPRA-201ENST00000332118 EPRSP07814 1512 aaKnown RBP20.5■□□□□ 0.87
SRPRA-201ENST00000332118 HNRNPUL2Q1KMD3 747 aaKnown RBP20.5■□□□□ 0.87
SRPRA-201ENST00000332118 TCOF1Q13428 1488 aaKnown RBP20.49■□□□□ 0.87
SRPRA-201ENST00000332118 FGD6Q6ZV73 1430 aa20.49■□□□□ 0.87
SRPRA-201ENST00000332118 RAPGEF6Q8TEU7 1601 aa20.48■□□□□ 0.87
SRPRA-201ENST00000332118 NCOA2Q15596 1464 aa20.47■□□□□ 0.87
SRPRA-201ENST00000332118 P3H3Q8IVL6 736 aa20.46■□□□□ 0.87
SRPRA-201ENST00000332118 MYOM3Q5VTT5 1437 aa20.44■□□□□ 0.86
SRPRA-201ENST00000332118 ADCY10Q96PN6 1610 aa20.43■□□□□ 0.86
SRPRA-201ENST00000332118 PTPN23Q9H3S7 1636 aa20.41■□□□□ 0.86
SRPRA-201ENST00000332118 SETD5Q9C0A6 1442 aa20.4■□□□□ 0.86
SRPRA-201ENST00000332118 NUP153P49790 1475 aaKnown RBP20.39■□□□□ 0.86
SRPRA-201ENST00000332118 MAPKBP1O60336 1514 aa20.39■□□□□ 0.85
SRPRA-201ENST00000332118 MTUS2Q5JR59 1369 aa20.38■□□□□ 0.85
SRPRA-201ENST00000332118 SHROOM2Q13796 1616 aa20.38■□□□□ 0.85
SRPRA-201ENST00000332118 MIA2Q96PC5 1412 aa20.37■□□□□ 0.85
SRPRA-201ENST00000332118 GCC2Q8IWJ2 1684 aa20.36■□□□□ 0.85
SRPRA-201ENST00000332118 RAB3GAP2Q9H2M9 1393 aa20.36■□□□□ 0.85
SRPRA-201ENST00000332118 AKNAQ7Z591 1439 aa20.36■□□□□ 0.85
SRPRA-201ENST00000332118 ABCA8O94911 1581 aa20.35■□□□□ 0.85
SRPRA-201ENST00000332118 CDK13Q14004 1512 aaKnown RBP20.34■□□□□ 0.85
SRPRA-201ENST00000332118 HFM1A2PYH4 1435 aa20.33■□□□□ 0.84
SRPRA-201ENST00000332118 CHD1O14646 1710 aa20.31■□□□□ 0.84
SRPRA-201ENST00000332118 CARMIL2Q6F5E8 1435 aa20.28■□□□□ 0.84
SRPRA-201ENST00000332118 PTPRKQ15262 1439 aa20.27■□□□□ 0.84
SRPRA-201ENST00000332118 ITSN2Q9NZM3 1697 aa20.27■□□□□ 0.83
SRPRA-201ENST00000332118 CHMP7Q8WUX9 453 aaPredicted RBP20.23■□□□□ 0.83
SRPRA-201ENST00000332118 DNMT1P26358 1616 aaKnown RBP20.23■□□□□ 0.83
SRPRA-201ENST00000332118 NAIPQ13075 1403 aa20.21■□□□□ 0.83
SRPRA-201ENST00000332118 TROQ12816 1431 aaPredicted RBP20.2■□□□□ 0.82
SRPRA-201ENST00000332118 CROCC2H7BZ55 1655 aa20.19■□□□□ 0.82
SRPRA-201ENST00000332118 PLB1Q6P1J6 1458 aa20.18■□□□□ 0.82
SRPRA-201ENST00000332118 ATP1B4Q9UN42 357 aaPredicted RBP20.17■□□□□ 0.82
SRPRA-201ENST00000332118 UACAQ9BZF9 1416 aa20.17■□□□□ 0.82
SRPRA-201ENST00000332118 CLASP1Q7Z460 1538 aa20.17■□□□□ 0.82
SRPRA-201ENST00000332118 ZNF316A6NFI3 1004 aaPredicted RBP20.16■□□□□ 0.82
SRPRA-201ENST00000332118 JPH4Q96JJ6 628 aa20.16■□□□□ 0.82
SRPRA-201ENST00000332118 ROCK1Q13464 1354 aa20.15■□□□□ 0.82
SRPRA-201ENST00000332118 FAM50AQ14320 339 aaKnown RBP20.14■□□□□ 0.82
SRPRA-201ENST00000332118 ADGBQ8N7X0 1667 aa20.13■□□□□ 0.81
SRPRA-201ENST00000332118 TIMELESSQ9UNS1 1208 aa20.13■□□□□ 0.81
SRPRA-201ENST00000332118 KIF14Q15058 1648 aa20.12■□□□□ 0.81
SRPRA-201ENST00000332118 ABCC10Q5T3U5 1492 aa20.11■□□□□ 0.81
SRPRA-201ENST00000332118 CDC42BPAQ5VT25 1732 aa20.11■□□□□ 0.81
SRPRA-201ENST00000332118 ACIN1Q9UKV3 1341 aaKnown RBP20.1■□□□□ 0.81
SRPRA-201ENST00000332118 DAPK1P53355 1430 aa20.08■□□□□ 0.81
SRPRA-201ENST00000332118 ATP10BO94823 1461 aa20.08■□□□□ 0.8
SRPRA-201ENST00000332118 GPATCH8Q9UKJ3 1502 aaKnown RBP20.08■□□□□ 0.8
SRPRA-201ENST00000332118 ADGRL2O95490 1459 aa20.07■□□□□ 0.8
SRPRA-201ENST00000332118 PRG4Q92954 1404 aaPredicted RBP20.06■□□□□ 0.8
SRPRA-201ENST00000332118 CDK11AQ9UQ88 783 aaPredicted RBP20.06■□□□□ 0.8
SRPRA-201ENST00000332118 ABCC5O15440 1437 aa20.04■□□□□ 0.8
SRPRA-201ENST00000332118 KDM6BO15054 1643 aa20.04■□□□□ 0.8
SRPRA-201ENST00000332118 DENND4BO75064 1496 aaPredicted RBP20.04■□□□□ 0.8
SRPRA-201ENST00000332118 ITGAEP38570 1179 aa20.04■□□□□ 0.8
SRPRA-201ENST00000332118 CAMSAP2Q08AD1 1489 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms