RNA–Protein interactions for RNA: ENST00000329314.5

TRIM61-201, Transcript of tripartite motif containing 61, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM61, Length 1,582 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM61-201ENST00000329314 ARAP1Q96P48 1450 aa29.31■■■□□ 2.28
TRIM61-201ENST00000329314 SYNJ2O15056 1496 aa29.24■■■□□ 2.27
TRIM61-201ENST00000329314 GRIN2AQ12879 1464 aa29.22■■■□□ 2.27
TRIM61-201ENST00000329314 EFCAB5A4FU69 1503 aa29.2■■■□□ 2.27
TRIM61-201ENST00000329314 CHMP7Q8WUX9 453 aaPredicted RBP29.13■■■□□ 2.25
TRIM61-201ENST00000329314 IQGAP2Q13576 1575 aa29.12■■■□□ 2.25
TRIM61-201ENST00000329314 SAMD9Q5K651 1589 aa29.1■■■□□ 2.25
TRIM61-201ENST00000329314 KIAA0586Q9BVV6 1533 aa29.09■■■□□ 2.25
TRIM61-201ENST00000329314 TRIM26Q12899 539 aaPredicted RBP29.08■■■□□ 2.25
TRIM61-201ENST00000329314 CEP170Q5SW79 1584 aa29.03■■■□□ 2.24
TRIM61-201ENST00000329314 NUP160Q12769 1436 aa29.03■■■□□ 2.24
TRIM61-201ENST00000329314 PPARGC1BQ86YN6 1023 aaKnown RBP29.03■■■□□ 2.24
TRIM61-201ENST00000329314 FHOD3Q2V2M9 1422 aa29.02■■■□□ 2.24
TRIM61-201ENST00000329314 FBLN2P98095 1184 aa29.02■■■□□ 2.24
TRIM61-201ENST00000329314 P3H3Q8IVL6 736 aa29.01■■■□□ 2.24
TRIM61-201ENST00000329314 UGGT2Q9NYU1 1516 aa29.01■■■□□ 2.23
TRIM61-201ENST00000329314 PCGF6Q9BYE7 350 aa29■■■□□ 2.23
TRIM61-201ENST00000329314 APLP2Q06481 763 aa28.99■■■□□ 2.23
TRIM61-201ENST00000329314 FMN1Q68DA7 1419 aa28.93■■■□□ 2.22
TRIM61-201ENST00000329314 CHD1O14646 1710 aa28.91■■■□□ 2.22
TRIM61-201ENST00000329314 PCF11O94913 1555 aaKnown RBP28.88■■■□□ 2.21
TRIM61-201ENST00000329314 CASKIN1Q8WXD9 1431 aa28.86■■■□□ 2.21
TRIM61-201ENST00000329314 MAP3K1Q13233 1512 aa28.86■■■□□ 2.21
TRIM61-201ENST00000329314 FYCO1Q9BQS8 1478 aa28.86■■■□□ 2.21
TRIM61-201ENST00000329314 DISP1Q96F81 1524 aa28.85■■■□□ 2.21
TRIM61-201ENST00000329314 KIAA0556O60303 1618 aa28.84■■■□□ 2.21
TRIM61-201ENST00000329314 TTBK1Q5TCY1 1321 aaPredicted RBP28.8■■■□□ 2.2
TRIM61-201ENST00000329314 TIAM1Q13009 1591 aa28.79■■■□□ 2.2
TRIM61-201ENST00000329314 JPH4Q96JJ6 628 aa28.78■■■□□ 2.2
TRIM61-201ENST00000329314 KANK4Q5T7N3 995 aaPredicted RBP28.75■■■□□ 2.19
TRIM61-201ENST00000329314 CFAP43Q8NDM7 1665 aa28.73■■■□□ 2.19
TRIM61-201ENST00000329314 CARMIL2Q6F5E8 1435 aa28.71■■■□□ 2.19
TRIM61-201ENST00000329314 ATP1B4Q9UN42 357 aaPredicted RBP28.67■■■□□ 2.18
TRIM61-201ENST00000329314 LRRC9Q6ZRR7 1453 aa28.66■■■□□ 2.18
TRIM61-201ENST00000329314 SHROOM2Q13796 1616 aa28.64■■■□□ 2.18
TRIM61-201ENST00000329314 HECW1Q76N89 1606 aa28.63■■■□□ 2.17
TRIM61-201ENST00000329314 LRRIQ1Q96JM4 1722 aa28.62■■■□□ 2.17
TRIM61-201ENST00000329314 CLASP1Q7Z460 1538 aa28.61■■■□□ 2.17
TRIM61-201ENST00000329314 PRG4Q92954 1404 aaPredicted RBP28.6■■■□□ 2.17
TRIM61-201ENST00000329314 CCDC18Q5T9S5 1454 aa28.58■■■□□ 2.17
TRIM61-201ENST00000329314 RAPGEF6Q8TEU7 1601 aa28.54■■■□□ 2.16
TRIM61-201ENST00000329314 EPRSP07814 1512 aaKnown RBP28.52■■■□□ 2.16
TRIM61-201ENST00000329314 NUP153P49790 1475 aaKnown RBP28.47■■■□□ 2.15
TRIM61-201ENST00000329314 PLB1Q6P1J6 1458 aa28.45■■■□□ 2.15
TRIM61-201ENST00000329314 RRBP1Q9P2E9 1410 aaKnown RBP28.45■■■□□ 2.15
TRIM61-201ENST00000329314 MTUS2Q5JR59 1369 aa28.44■■■□□ 2.14
TRIM61-201ENST00000329314 EHBP1L1Q8N3D4 1523 aa28.43■■■□□ 2.14
TRIM61-201ENST00000329314 ABCA8O94911 1581 aa28.43■■■□□ 2.14
TRIM61-201ENST00000329314 PTPRGP23470 1445 aa28.42■■■□□ 2.14
TRIM61-201ENST00000329314 CDK13Q14004 1512 aaKnown RBP28.42■■■□□ 2.14
TRIM61-201ENST00000329314 ERCC6L2Q5T890 1561 aa28.4■■■□□ 2.14
TRIM61-201ENST00000329314 MAGI3Q5TCQ9 1506 aa28.39■■■□□ 2.13
TRIM61-201ENST00000329314 PHLDB1Q86UU1 1377 aa28.37■■■□□ 2.13
TRIM61-201ENST00000329314 OSCARQ8IYS5 282 aa28.34■■■□□ 2.13
TRIM61-201ENST00000329314 SUPT6HQ7KZ85 1726 aaKnown RBP28.34■■■□□ 2.13
TRIM61-201ENST00000329314 CCNB3Q8WWL7 1395 aa28.34■■■□□ 2.13
TRIM61-201ENST00000329314 ARID3CA6NKF2 412 aa28.3■■■□□ 2.12
TRIM61-201ENST00000329314 NCOA2Q15596 1464 aa28.3■■■□□ 2.12
TRIM61-201ENST00000329314 ARHGEF11O15085 1522 aa28.29■■■□□ 2.12
TRIM61-201ENST00000329314 CDK11AQ9UQ88 783 aaPredicted RBP28.28■■■□□ 2.12
TRIM61-201ENST00000329314 UACAQ9BZF9 1416 aa28.27■■■□□ 2.12
TRIM61-201ENST00000329314 ATP10BO94823 1461 aa28.24■■■□□ 2.11
TRIM61-201ENST00000329314 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.23■■■□□ 2.11
TRIM61-201ENST00000329314 HNRNPUL2Q1KMD3 747 aaKnown RBP28.23■■■□□ 2.11
TRIM61-201ENST00000329314 TROQ12816 1431 aaPredicted RBP28.2■■■□□ 2.1
TRIM61-201ENST00000329314 MYOM3Q5VTT5 1437 aa28.2■■■□□ 2.1
TRIM61-201ENST00000329314 FGD6Q6ZV73 1430 aa28.19■■■□□ 2.1
TRIM61-201ENST00000329314 ABCC2Q92887 1545 aa28.19■■■□□ 2.1
TRIM61-201ENST00000329314 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.19■■■□□ 2.1
TRIM61-201ENST00000329314 UHRF1BP1LA0JNW5 1464 aa28.15■■■□□ 2.1
TRIM61-201ENST00000329314 HRCP23327 699 aa28.14■■■□□ 2.1
TRIM61-201ENST00000329314 ADCY10Q96PN6 1610 aa28.13■■■□□ 2.09
TRIM61-201ENST00000329314 PLEKHD1A6NEE1 506 aa28.11■■■□□ 2.09
TRIM61-201ENST00000329314 FAM50AQ14320 339 aaKnown RBP28.09■■■□□ 2.09
TRIM61-201ENST00000329314 MIA2Q96PC5 1412 aa28.07■■■□□ 2.08
TRIM61-201ENST00000329314 PTPN23Q9H3S7 1636 aa28.05■■■□□ 2.08
TRIM61-201ENST00000329314 KIF14Q15058 1648 aa28.04■■■□□ 2.08
TRIM61-201ENST00000329314 TCOF1Q13428 1488 aaKnown RBP28.03■■■□□ 2.08
TRIM61-201ENST00000329314 KDM5BQ9UGL1 1544 aa28.03■■■□□ 2.08
TRIM61-201ENST00000329314 ITGAEP38570 1179 aa27.99■■■□□ 2.07
TRIM61-201ENST00000329314 ZCCHC11Q5TAX3 1644 aaKnown RBP27.99■■■□□ 2.07
TRIM61-201ENST00000329314 ABCC10Q5T3U5 1492 aa27.96■■■□□ 2.07
TRIM61-201ENST00000329314 ITSN2Q9NZM3 1697 aa27.96■■■□□ 2.07
TRIM61-201ENST00000329314 GPATCH8Q9UKJ3 1502 aaKnown RBP27.94■■■□□ 2.06
TRIM61-201ENST00000329314 CCER1Q8TC90 406 aaPredicted RBP27.9■■■□□ 2.06
TRIM61-201ENST00000329314 ZEB1P37275 1124 aaPredicted RBP27.89■■■□□ 2.05
TRIM61-201ENST00000329314 CDC42BPAQ5VT25 1732 aa27.86■■■□□ 2.05
TRIM61-201ENST00000329314 PTPRKQ15262 1439 aa27.86■■■□□ 2.05
TRIM61-201ENST00000329314 CFDP1Q9UEE9 299 aaPredicted RBP27.85■■■□□ 2.05
TRIM61-201ENST00000329314 SETD5Q9C0A6 1442 aa27.83■■■□□ 2.05
TRIM61-201ENST00000329314 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.8■■■□□ 2.04
TRIM61-201ENST00000329314 CAMSAP2Q08AD1 1489 aa27.79■■■□□ 2.04
TRIM61-201ENST00000329314 RAB3GAP2Q9H2M9 1393 aa27.78■■■□□ 2.04
TRIM61-201ENST00000329314 ZNF644Q9H582 1327 aaPredicted RBP27.78■■■□□ 2.04
TRIM61-201ENST00000329314 DNMT1P26358 1616 aaKnown RBP27.78■■■□□ 2.04
TRIM61-201ENST00000329314 TTC37Q6PGP7 1564 aa27.77■■■□□ 2.04
TRIM61-201ENST00000329314 PREX2Q70Z35 1606 aa27.77■■■□□ 2.04
TRIM61-201ENST00000329314 HFM1A2PYH4 1435 aa27.75■■■□□ 2.03
TRIM61-201ENST00000329314 DAPK1P53355 1430 aa27.75■■■□□ 2.03
TRIM61-201ENST00000329314 WDR7Q9Y4E6 1490 aa27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms