RNA–Protein interactions for RNA: ENST00000328796.4

CLDN6-201, Transcript of claudin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN6, Length 1,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6-201ENST00000328796 PRXQ9BXM0 1461 aa28.21■■■□□ 2.11
CLDN6-201ENST00000328796 KIAA0586Q9BVV6 1533 aa28.18■■■□□ 2.1
CLDN6-201ENST00000328796 CSRNP3Q8WYN3 585 aa28.18■■■□□ 2.1
CLDN6-201ENST00000328796 ARAP1Q96P48 1450 aa28.12■■■□□ 2.09
CLDN6-201ENST00000328796 JPH4Q96JJ6 628 aa28.1■■■□□ 2.09
CLDN6-201ENST00000328796 ERCC6L2Q5T890 1561 aa28.08■■■□□ 2.09
CLDN6-201ENST00000328796 FAM9AQ8IZU1 332 aaPredicted RBP28.06■■■□□ 2.08
CLDN6-201ENST00000328796 IQGAP2Q13576 1575 aa28.04■■■□□ 2.08
CLDN6-201ENST00000328796 PRG4Q92954 1404 aaPredicted RBP28.04■■■□□ 2.08
CLDN6-201ENST00000328796 CYB5RLQ6IPT4 315 aa28■■■□□ 2.07
CLDN6-201ENST00000328796 CTTNBP2Q8WZ74 1663 aa27.99■■■□□ 2.07
CLDN6-201ENST00000328796 KIF21BO75037 1637 aa27.97■■■□□ 2.07
CLDN6-201ENST00000328796 UGGT2Q9NYU1 1516 aa27.91■■■□□ 2.06
CLDN6-201ENST00000328796 CARMIL2Q6F5E8 1435 aa27.85■■■□□ 2.05
CLDN6-201ENST00000328796 DISP1Q96F81 1524 aa27.85■■■□□ 2.05
CLDN6-201ENST00000328796 GOLGA3Q08378 1498 aa27.78■■■□□ 2.04
CLDN6-201ENST00000328796 KIAA0556O60303 1618 aa27.78■■■□□ 2.04
CLDN6-201ENST00000328796 TNIKQ9UKE5 1360 aa27.76■■■□□ 2.04
CLDN6-201ENST00000328796 PTPRGP23470 1445 aa27.73■■■□□ 2.03
CLDN6-201ENST00000328796 SAMD9Q5K651 1589 aa27.65■■■□□ 2.02
CLDN6-201ENST00000328796 UBTFP17480 764 aaKnown RBP27.65■■■□□ 2.02
CLDN6-201ENST00000328796 EHMT2Q96KQ7 1210 aa27.65■■■□□ 2.02
CLDN6-201ENST00000328796 ADCY10Q96PN6 1610 aa27.63■■■□□ 2.01
CLDN6-201ENST00000328796 TTBK1Q5TCY1 1321 aaPredicted RBP27.6■■■□□ 2.01
CLDN6-201ENST00000328796 UACAQ9BZF9 1416 aa27.55■■■□□ 2
CLDN6-201ENST00000328796 UHRF1BP1LA0JNW5 1464 aa27.55■■■□□ 2
CLDN6-201ENST00000328796 EFCAB5A4FU69 1503 aa27.55■■■□□ 2
CLDN6-201ENST00000328796 ABCC2Q92887 1545 aa27.52■■■□□ 2
CLDN6-201ENST00000328796 P3H3Q8IVL6 736 aa27.52■■■□□ 2
CLDN6-201ENST00000328796 RANGAP1P46060 587 aaPredicted RBP27.51■■□□□ 1.99
CLDN6-201ENST00000328796 ABCA8O94911 1581 aa27.47■■□□□ 1.99
CLDN6-201ENST00000328796 PLB1Q6P1J6 1458 aa27.47■■□□□ 1.99
CLDN6-201ENST00000328796 NPM1P06748 294 aaKnown RBP eCLIP27.47■■□□□ 1.99
CLDN6-201ENST00000328796 FHOD3Q2V2M9 1422 aa27.45■■□□□ 1.99
CLDN6-201ENST00000328796 MAPKBP1O60336 1514 aa27.43■■□□□ 1.98
CLDN6-201ENST00000328796 ARHGAP35Q9NRY4 1499 aa27.42■■□□□ 1.98
CLDN6-201ENST00000328796 KDM5BQ9UGL1 1544 aa27.41■■□□□ 1.98
CLDN6-201ENST00000328796 TRHP20396 242 aaPredicted RBP27.36■■□□□ 1.97
CLDN6-201ENST00000328796 ZCCHC11Q5TAX3 1644 aaKnown RBP27.35■■□□□ 1.97
CLDN6-201ENST00000328796 RAPGEF6Q8TEU7 1601 aa27.34■■□□□ 1.97
CLDN6-201ENST00000328796 KIF13AQ9H1H9 1805 aa27.29■■□□□ 1.96
CLDN6-201ENST00000328796 CLIP1P30622 1438 aa27.28■■□□□ 1.96
CLDN6-201ENST00000328796 ABCC10Q5T3U5 1492 aa27.28■■□□□ 1.96
CLDN6-201ENST00000328796 LOC105371045A0A1W2PR82 267 aa27.27■■□□□ 1.96
CLDN6-201ENST00000328796 ASXL2Q76L83 1435 aa27.27■■□□□ 1.96
CLDN6-201ENST00000328796 FMN1Q68DA7 1419 aa27.26■■□□□ 1.95
CLDN6-201ENST00000328796 NUP153P49790 1475 aaKnown RBP27.24■■□□□ 1.95
CLDN6-201ENST00000328796 DIP2BQ9P265 1576 aa27.24■■□□□ 1.95
CLDN6-201ENST00000328796 ATP10BO94823 1461 aa27.23■■□□□ 1.95
CLDN6-201ENST00000328796 CEP162Q5TB80 1403 aa27.2■■□□□ 1.94
CLDN6-201ENST00000328796 WDR7Q9Y4E6 1490 aa27.17■■□□□ 1.94
CLDN6-201ENST00000328796 FAM69CQ0P6D2 419 aa27.17■■□□□ 1.94
CLDN6-201ENST00000328796 ARID3CA6NKF2 412 aa27.15■■□□□ 1.94
CLDN6-201ENST00000328796 GLI2P10070 1586 aa27.14■■□□□ 1.93
CLDN6-201ENST00000328796 EPRSP07814 1512 aaKnown RBP27.13■■□□□ 1.93
CLDN6-201ENST00000328796 HECW1Q76N89 1606 aa27.13■■□□□ 1.93
CLDN6-201ENST00000328796 CASKIN1Q8WXD9 1431 aa27.08■■□□□ 1.93
CLDN6-201ENST00000328796 PCF11O94913 1555 aaKnown RBP27.08■■□□□ 1.92
CLDN6-201ENST00000328796 CDK13Q14004 1512 aaKnown RBP27.05■■□□□ 1.92
CLDN6-201ENST00000328796 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.05■■□□□ 1.92
CLDN6-201ENST00000328796 HNRNPUL2Q1KMD3 747 aaKnown RBP27.05■■□□□ 1.92
CLDN6-201ENST00000328796 LRRIQ1Q96JM4 1722 aa27.02■■□□□ 1.92
CLDN6-201ENST00000328796 ATP1B4Q9UN42 357 aaPredicted RBP27.02■■□□□ 1.92
CLDN6-201ENST00000328796 FYCO1Q9BQS8 1478 aa27.02■■□□□ 1.92
CLDN6-201ENST00000328796 MAP3K4Q9Y6R4 1608 aa27.01■■□□□ 1.91
CLDN6-201ENST00000328796 TSPOAP1O95153 1857 aa27■■□□□ 1.91
CLDN6-201ENST00000328796 KCNH8Q96L42 1107 aa26.99■■□□□ 1.91
CLDN6-201ENST00000328796 PLEKHD1A6NEE1 506 aa26.97■■□□□ 1.91
CLDN6-201ENST00000328796 PPRC1Q5VV67 1664 aaKnown RBP26.96■■□□□ 1.91
CLDN6-201ENST00000328796 CFAP43Q8NDM7 1665 aa26.96■■□□□ 1.91
CLDN6-201ENST00000328796 CCDC18Q5T9S5 1454 aa26.95■■□□□ 1.9
CLDN6-201ENST00000328796 ABCA9Q8IUA7 1624 aa26.93■■□□□ 1.9
CLDN6-201ENST00000328796 CDK11AQ9UQ88 783 aaPredicted RBP26.9■■□□□ 1.9
CLDN6-201ENST00000328796 CD109Q6YHK3 1445 aa26.89■■□□□ 1.9
CLDN6-201ENST00000328796 VPS8Q8N3P4 1428 aa26.87■■□□□ 1.89
CLDN6-201ENST00000328796 MAGI3Q5TCQ9 1506 aa26.86■■□□□ 1.89
CLDN6-201ENST00000328796 TROQ12816 1431 aaPredicted RBP26.85■■□□□ 1.89
CLDN6-201ENST00000328796 TEX14Q8IWB6 1497 aa26.84■■□□□ 1.89
CLDN6-201ENST00000328796 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.82■■□□□ 1.88
CLDN6-201ENST00000328796 TTC37Q6PGP7 1564 aa26.79■■□□□ 1.88
CLDN6-201ENST00000328796 KIF14Q15058 1648 aa26.77■■□□□ 1.88
CLDN6-201ENST00000328796 KDM6BO15054 1643 aa26.75■■□□□ 1.87
CLDN6-201ENST00000328796 NEO1Q92859 1461 aa26.68■■□□□ 1.86
CLDN6-201ENST00000328796 COL17A1Q9UMD9 1497 aaPredicted RBP26.68■■□□□ 1.86
CLDN6-201ENST00000328796 TIAM1Q13009 1591 aa26.68■■□□□ 1.86
CLDN6-201ENST00000328796 MYO5CQ9NQX4 1742 aa26.67■■□□□ 1.86
CLDN6-201ENST00000328796 PHLDB1Q86UU1 1377 aa26.67■■□□□ 1.86
CLDN6-201ENST00000328796 PLCH2O75038 1416 aa26.67■■□□□ 1.86
CLDN6-201ENST00000328796 MTUS2Q5JR59 1369 aa26.66■■□□□ 1.86
CLDN6-201ENST00000328796 EHBP1L1Q8N3D4 1523 aa26.65■■□□□ 1.86
CLDN6-201ENST00000328796 ARAP3Q8WWN8 1544 aa26.65■■□□□ 1.86
CLDN6-201ENST00000328796 MAP3K1Q13233 1512 aa26.65■■□□□ 1.86
CLDN6-201ENST00000328796 CFAP74Q9C0B2 1584 aa26.63■■□□□ 1.85
CLDN6-201ENST00000328796 FANCAO15360 1455 aa26.62■■□□□ 1.85
CLDN6-201ENST00000328796 CDC42BPBQ9Y5S2 1711 aa26.58■■□□□ 1.85
CLDN6-201ENST00000328796 PREX2Q70Z35 1606 aa26.58■■□□□ 1.85
CLDN6-201ENST00000328796 AKNAQ7Z591 1439 aa26.57■■□□□ 1.84
CLDN6-201ENST00000328796 CDC42BPAQ5VT25 1732 aa26.57■■□□□ 1.84
CLDN6-201ENST00000328796 LRRC9Q6ZRR7 1453 aa26.56■■□□□ 1.84
CLDN6-201ENST00000328796 EFCAB2Q5VUJ9 269 aa26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms