RNA–Protein interactions for RNA: ENST00000327470.4

FANCF-201, Transcript of FA complementation group F, humanhuman

APPRIS P1 BASIC

Gene FANCF, Length 4,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCF-201ENST00000327470 EIF4G2P78344 907 aaKnown RBP eCLIP14.68□□□□□ -0.06
FANCF-201ENST00000327470 ZBTB47Q9UFB7 747 aaPredicted RBP14.68□□□□□ -0.06
FANCF-201ENST00000327470 RRP7BPQ9NSQ0 103 aa14.66□□□□□ -0.06
FANCF-201ENST00000327470 GLIPR1L2Q4G1C9 344 aa14.66□□□□□ -0.06
FANCF-201ENST00000327470 KANK4Q5T7N3 995 aaPredicted RBP14.64□□□□□ -0.07
FANCF-201ENST00000327470 CCDC136Q96JN2 1154 aa14.64□□□□□ -0.07
FANCF-201ENST00000327470 TMC1Q8TDI8 760 aa14.63□□□□□ -0.07
FANCF-201ENST00000327470 TOP2AP11388 1531 aaKnown RBP14.63□□□□□ -0.07
FANCF-201ENST00000327470 RTN4Q9NQC3 1192 aaKnown RBP14.62□□□□□ -0.07
FANCF-201ENST00000327470 SALL2Q9Y467 1007 aaPredicted RBP14.61□□□□□ -0.07
FANCF-201ENST00000327470 SMARCA4P51532 1647 aa14.57□□□□□ -0.08
FANCF-201ENST00000327470 TIMELESSQ9UNS1 1208 aa14.56□□□□□ -0.08
FANCF-201ENST00000327470 CANXP27824 592 aaKnown RBP14.55□□□□□ -0.08
FANCF-201ENST00000327470 RUSC2Q8N2Y8 1516 aa14.54□□□□□ -0.08
FANCF-201ENST00000327470 KDM2AQ9Y2K7 1162 aa14.53□□□□□ -0.08
FANCF-201ENST00000327470 SETD5Q9C0A6 1442 aa14.51□□□□□ -0.09
FANCF-201ENST00000327470 CARMIL1Q5VZK9 1371 aa14.51□□□□□ -0.09
FANCF-201ENST00000327470 TSHZ2Q9NRE2 1034 aa14.51□□□□□ -0.09
FANCF-201ENST00000327470 RBM19Q9Y4C8 960 aaKnown RBP14.51□□□□□ -0.09
FANCF-201ENST00000327470 FHAD1B1AJZ9 1412 aa14.51□□□□□ -0.09
FANCF-201ENST00000327470 TSPY4P0CV99 314 aa14.5□□□□□ -0.09
FANCF-201ENST00000327470 TSPY10P0CW01 314 aa14.5□□□□□ -0.09
FANCF-201ENST00000327470 DEKP35659 375 aaKnown RBP14.5□□□□□ -0.09
FANCF-201ENST00000327470 CCER2I3L3R5 266 aa14.49□□□□□ -0.09
FANCF-201ENST00000327470 ARXQ96QS3 562 aa14.49□□□□□ -0.09
FANCF-201ENST00000327470 RAB3GAP2Q9H2M9 1393 aa14.49□□□□□ -0.09
FANCF-201ENST00000327470 SMARCA2P51531 1590 aa14.48□□□□□ -0.09
FANCF-201ENST00000327470 CUX2O14529 1486 aa14.48□□□□□ -0.09
FANCF-201ENST00000327470 ATAD2BQ9ULI0 1458 aa14.47□□□□□ -0.09
FANCF-201ENST00000327470 RAPGEF2Q9Y4G8 1499 aa14.47□□□□□ -0.09
FANCF-201ENST00000327470 PPP4R2Q9NY27 417 aa14.45□□□□□ -0.1
FANCF-201ENST00000327470 SENP3-EIF4A1A0A087X0R7 540 aa14.45□□□□□ -0.1
FANCF-201ENST00000327470 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.45□□□□□ -0.1
FANCF-201ENST00000327470 DHX57Q6P158 1386 aaKnown RBP14.44□□□□□ -0.1
FANCF-201ENST00000327470 PPP1R15AO75807 674 aaPredicted RBP14.41□□□□□ -0.1
FANCF-201ENST00000327470 NEFMP07197 916 aa14.39□□□□□ -0.11
FANCF-201ENST00000327470 NOP58Q9Y2X3 529 aaKnown RBP14.38□□□□□ -0.11
FANCF-201ENST00000327470 B4GALNT3Q6L9W6 998 aa14.38□□□□□ -0.11
FANCF-201ENST00000327470 CFDP1Q9UEE9 299 aaPredicted RBP14.38□□□□□ -0.11
FANCF-201ENST00000327470 WDR43Q15061 677 aaKnown RBP eCLIP14.38□□□□□ -0.11
FANCF-201ENST00000327470 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.37□□□□□ -0.11
FANCF-201ENST00000327470 CHMP7Q8WUX9 453 aaPredicted RBP14.37□□□□□ -0.11
FANCF-201ENST00000327470 KCNH8Q96L42 1107 aa14.37□□□□□ -0.11
FANCF-201ENST00000327470 ARHGAP35Q9NRY4 1499 aa14.36□□□□□ -0.11
FANCF-201ENST00000327470 HSPA5P11021 654 aaKnown RBP14.36□□□□□ -0.11
FANCF-201ENST00000327470 LAS1LQ9Y4W2 734 aaKnown RBP14.35□□□□□ -0.11
FANCF-201ENST00000327470 CARD11Q9BXL7 1154 aa14.35□□□□□ -0.11
FANCF-201ENST00000327470 RGL3Q3MIN7 710 aa14.34□□□□□ -0.11
FANCF-201ENST00000327470 PLEKHD1A6NEE1 506 aa14.33□□□□□ -0.11
FANCF-201ENST00000327470 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.33□□□□□ -0.11
FANCF-201ENST00000327470 CHGAP10645 457 aaKnown RBP14.32□□□□□ -0.12
FANCF-201ENST00000327470 ANP32BQ92688 251 aaKnown RBP14.32□□□□□ -0.12
FANCF-201ENST00000327470 UPF2Q9HAU5 1272 aaKnown RBP14.32□□□□□ -0.12
FANCF-201ENST00000327470 FOXD1Q16676 465 aa14.27□□□□□ -0.12
FANCF-201ENST00000327470 ERICH6BQ5W0A0 696 aa14.27□□□□□ -0.12
FANCF-201ENST00000327470 PPM1GO15355 546 aaPredicted RBP14.26□□□□□ -0.13
FANCF-201ENST00000327470 FMN1Q68DA7 1419 aa14.24□□□□□ -0.13
FANCF-201ENST00000327470 MPHOSPH9Q99550 1183 aa14.24□□□□□ -0.13
FANCF-201ENST00000327470 HSP90AA1P07900 732 aaKnown RBP14.23□□□□□ -0.13
FANCF-201ENST00000327470 DDRGK1Q96HY6 314 aa14.23□□□□□ -0.13
FANCF-201ENST00000327470 CADPSQ9ULU8 1353 aa14.23□□□□□ -0.13
FANCF-201ENST00000327470 FHOD3Q2V2M9 1422 aa14.22□□□□□ -0.13
FANCF-201ENST00000327470 NAP1L5Q96NT1 182 aaPredicted RBP14.21□□□□□ -0.13
FANCF-201ENST00000327470 L3MBTL2Q969R5 705 aa14.21□□□□□ -0.13
FANCF-201ENST00000327470 KNSTRNQ9Y448 316 aa14.2□□□□□ -0.14
FANCF-201ENST00000327470 EIF4G1Q04637 1599 aaKnown RBP14.19□□□□□ -0.14
FANCF-201ENST00000327470 DCAF11Q8TEB1 546 aa14.19□□□□□ -0.14
FANCF-201ENST00000327470 KIF21BO75037 1637 aa14.19□□□□□ -0.14
FANCF-201ENST00000327470 TDRD9Q8NDG6 1382 aaKnown RBP14.19□□□□□ -0.14
FANCF-201ENST00000327470 PKD2Q13563 968 aa14.17□□□□□ -0.14
FANCF-201ENST00000327470 NCAPD3P42695 1498 aa14.16□□□□□ -0.14
FANCF-201ENST00000327470 CC2D1BQ5T0F9 858 aaKnown RBP14.16□□□□□ -0.14
FANCF-201ENST00000327470 CDCA8Q53HL2 280 aa14.16□□□□□ -0.14
FANCF-201ENST00000327470 TRIM44Q96DX7 344 aaPredicted RBP14.15□□□□□ -0.14
FANCF-201ENST00000327470 BICRAQ9NZM4 1560 aa14.14□□□□□ -0.15
FANCF-201ENST00000327470 SLC24A1O60721 1099 aa14.13□□□□□ -0.15
FANCF-201ENST00000327470 IGF1RP08069 1367 aa14.12□□□□□ -0.15
FANCF-201ENST00000327470 RGS3P49796 1198 aa14.11□□□□□ -0.15
FANCF-201ENST00000327470 BECN1Q14457 450 aa14.11□□□□□ -0.15
FANCF-201ENST00000327470 SYNJ1O43426 1573 aa14.11□□□□□ -0.15
FANCF-201ENST00000327470 STAG3Q9UJ98 1225 aa14.09□□□□□ -0.15
FANCF-201ENST00000327470 NUDCQ9Y266 331 aa14.09□□□□□ -0.15
FANCF-201ENST00000327470 NPM1P06748 294 aaKnown RBP eCLIP14.09□□□□□ -0.15
FANCF-201ENST00000327470 PRKRIP1Q9H875 184 aaPredicted RBP14.09□□□□□ -0.15
FANCF-201ENST00000327470 TMF1P82094 1093 aa14.08□□□□□ -0.15
FANCF-201ENST00000327470 PHLDB1Q86UU1 1377 aa14.07□□□□□ -0.16
FANCF-201ENST00000327470 NEUROD2Q15784 382 aa14.07□□□□□ -0.16
FANCF-201ENST00000327470 RCAN3Q9UKA8 241 aa14.07□□□□□ -0.16
FANCF-201ENST00000327470 ARAP1Q96P48 1450 aa14.06□□□□□ -0.16
FANCF-201ENST00000327470 CCDC18Q5T9S5 1454 aa14.06□□□□□ -0.16
FANCF-201ENST00000327470 PRKCSHP14314 528 aaPredicted RBP14.06□□□□□ -0.16
FANCF-201ENST00000327470 RRBP1Q9P2E9 1410 aaKnown RBP14.05□□□□□ -0.16
FANCF-201ENST00000327470 RALBP1Q15311 655 aa14.05□□□□□ -0.16
FANCF-201ENST00000327470 NUP155O75694 1391 aa14.05□□□□□ -0.16
FANCF-201ENST00000327470 ARID4BQ4LE39 1312 aaPredicted RBP14.04□□□□□ -0.16
FANCF-201ENST00000327470 KTN1Q86UP2 1357 aaKnown RBP14.04□□□□□ -0.16
FANCF-201ENST00000327470 CFAP53Q96M91 514 aa14.03□□□□□ -0.16
FANCF-201ENST00000327470 PDS5BQ9NTI5 1447 aa14.03□□□□□ -0.16
FANCF-201ENST00000327470 FANCD2Q9BXW9 1451 aa14.02□□□□□ -0.16
FANCF-201ENST00000327470 FRAT1Q92837 279 aaPredicted RBP14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms