RNA–Protein interactions for RNA: ENST00000327331.2

CDCA8-201, Transcript of cell division cycle associated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA8, Length 2,303 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8-201ENST00000327331 FBLN2P98095 1184 aa18.16■□□□□ 0.5
CDCA8-201ENST00000327331 P3H3Q8IVL6 736 aa18.16■□□□□ 0.5
CDCA8-201ENST00000327331 ARAP1Q96P48 1450 aa18.12■□□□□ 0.49
CDCA8-201ENST00000327331 ARHGAP35Q9NRY4 1499 aa18.12■□□□□ 0.49
CDCA8-201ENST00000327331 PCGF6Q9BYE7 350 aa18.1■□□□□ 0.49
CDCA8-201ENST00000327331 CHMP7Q8WUX9 453 aaPredicted RBP18.09■□□□□ 0.49
CDCA8-201ENST00000327331 CTTNBP2Q8WZ74 1663 aa18.08■□□□□ 0.48
CDCA8-201ENST00000327331 VPS8Q8N3P4 1428 aa18.07■□□□□ 0.48
CDCA8-201ENST00000327331 MAGI1Q96QZ7 1491 aaPredicted RBP18.06■□□□□ 0.48
CDCA8-201ENST00000327331 GRIN2AQ12879 1464 aa18.04■□□□□ 0.48
CDCA8-201ENST00000327331 SYNJ2O15056 1496 aa18.03■□□□□ 0.48
CDCA8-201ENST00000327331 FHOD3Q2V2M9 1422 aa18.03■□□□□ 0.48
CDCA8-201ENST00000327331 ATP1B4Q9UN42 357 aaPredicted RBP17.97■□□□□ 0.47
CDCA8-201ENST00000327331 IQGAP2Q13576 1575 aa17.96■□□□□ 0.47
CDCA8-201ENST00000327331 CEP170Q5SW79 1584 aa17.96■□□□□ 0.47
CDCA8-201ENST00000327331 TRIM26Q12899 539 aaPredicted RBP17.95■□□□□ 0.46
CDCA8-201ENST00000327331 APLP2Q06481 763 aa17.94■□□□□ 0.46
CDCA8-201ENST00000327331 EFCAB5A4FU69 1503 aa17.91■□□□□ 0.46
CDCA8-201ENST00000327331 KIAA0586Q9BVV6 1533 aa17.91■□□□□ 0.46
CDCA8-201ENST00000327331 SAMD9Q5K651 1589 aa17.89■□□□□ 0.46
CDCA8-201ENST00000327331 CHD1O14646 1710 aa17.89■□□□□ 0.45
CDCA8-201ENST00000327331 KANK4Q5T7N3 995 aaPredicted RBP17.88■□□□□ 0.45
CDCA8-201ENST00000327331 NUP160Q12769 1436 aa17.87■□□□□ 0.45
CDCA8-201ENST00000327331 PCF11O94913 1555 aaKnown RBP17.86■□□□□ 0.45
CDCA8-201ENST00000327331 UGGT2Q9NYU1 1516 aa17.83■□□□□ 0.44
CDCA8-201ENST00000327331 JPH4Q96JJ6 628 aa17.83■□□□□ 0.44
CDCA8-201ENST00000327331 ARID3CA6NKF2 412 aa17.82■□□□□ 0.44
CDCA8-201ENST00000327331 DISP1Q96F81 1524 aa17.82■□□□□ 0.44
CDCA8-201ENST00000327331 FMN1Q68DA7 1419 aa17.8■□□□□ 0.44
CDCA8-201ENST00000327331 KIAA0556O60303 1618 aa17.79■□□□□ 0.44
CDCA8-201ENST00000327331 CASKIN1Q8WXD9 1431 aa17.77■□□□□ 0.44
CDCA8-201ENST00000327331 FYCO1Q9BQS8 1478 aa17.75■□□□□ 0.43
CDCA8-201ENST00000327331 TIAM1Q13009 1591 aa17.74■□□□□ 0.43
CDCA8-201ENST00000327331 PRG4Q92954 1404 aaPredicted RBP17.72■□□□□ 0.43
CDCA8-201ENST00000327331 LRRIQ1Q96JM4 1722 aa17.7■□□□□ 0.42
CDCA8-201ENST00000327331 CARMIL2Q6F5E8 1435 aa17.69■□□□□ 0.42
CDCA8-201ENST00000327331 LRRC9Q6ZRR7 1453 aa17.68■□□□□ 0.42
CDCA8-201ENST00000327331 CFAP43Q8NDM7 1665 aa17.67■□□□□ 0.42
CDCA8-201ENST00000327331 ERCC6L2Q5T890 1561 aa17.67■□□□□ 0.42
CDCA8-201ENST00000327331 SCAF1Q9H7N4 1312 aaKnown RBP17.67■□□□□ 0.42
CDCA8-201ENST00000327331 PLB1Q6P1J6 1458 aa17.66■□□□□ 0.42
CDCA8-201ENST00000327331 CDK13Q14004 1512 aaKnown RBP17.66■□□□□ 0.42
CDCA8-201ENST00000327331 MAP3K1Q13233 1512 aa17.63■□□□□ 0.41
CDCA8-201ENST00000327331 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.63■□□□□ 0.41
CDCA8-201ENST00000327331 HNRNPUL2Q1KMD3 747 aaKnown RBP17.63■□□□□ 0.41
CDCA8-201ENST00000327331 CLASP1Q7Z460 1538 aa17.63■□□□□ 0.41
CDCA8-201ENST00000327331 HECW1Q76N89 1606 aa17.62■□□□□ 0.41
CDCA8-201ENST00000327331 EPRSP07814 1512 aaKnown RBP17.61■□□□□ 0.41
CDCA8-201ENST00000327331 MTUS2Q5JR59 1369 aa17.61■□□□□ 0.41
CDCA8-201ENST00000327331 SHROOM2Q13796 1616 aa17.6■□□□□ 0.41
CDCA8-201ENST00000327331 NUP153P49790 1475 aaKnown RBP17.6■□□□□ 0.41
CDCA8-201ENST00000327331 RAPGEF6Q8TEU7 1601 aa17.6■□□□□ 0.41
CDCA8-201ENST00000327331 PHLDB1Q86UU1 1377 aa17.59■□□□□ 0.41
CDCA8-201ENST00000327331 MAGI3Q5TCQ9 1506 aa17.59■□□□□ 0.41
CDCA8-201ENST00000327331 PTPRGP23470 1445 aa17.59■□□□□ 0.41
CDCA8-201ENST00000327331 MYT1Q01538 1121 aa17.58■□□□□ 0.4
CDCA8-201ENST00000327331 OSCARQ8IYS5 282 aa17.56■□□□□ 0.4
CDCA8-201ENST00000327331 CCDC18Q5T9S5 1454 aa17.56■□□□□ 0.4
CDCA8-201ENST00000327331 ITGAEP38570 1179 aa17.55■□□□□ 0.4
CDCA8-201ENST00000327331 ABCA8O94911 1581 aa17.51■□□□□ 0.39
CDCA8-201ENST00000327331 CCNB3Q8WWL7 1395 aa17.5■□□□□ 0.39
CDCA8-201ENST00000327331 FAM50AQ14320 339 aaKnown RBP17.49■□□□□ 0.39
CDCA8-201ENST00000327331 NCOA2Q15596 1464 aa17.49■□□□□ 0.39
CDCA8-201ENST00000327331 EHBP1L1Q8N3D4 1523 aa17.49■□□□□ 0.39
CDCA8-201ENST00000327331 RRBP1Q9P2E9 1410 aaKnown RBP17.49■□□□□ 0.39
CDCA8-201ENST00000327331 ZEB1P37275 1124 aaPredicted RBP17.48■□□□□ 0.39
CDCA8-201ENST00000327331 ATP10BO94823 1461 aa17.45■□□□□ 0.38
CDCA8-201ENST00000327331 UACAQ9BZF9 1416 aa17.45■□□□□ 0.38
CDCA8-201ENST00000327331 SUPT6HQ7KZ85 1726 aaKnown RBP17.45■□□□□ 0.38
CDCA8-201ENST00000327331 CDK11AQ9UQ88 783 aaPredicted RBP17.42■□□□□ 0.38
CDCA8-201ENST00000327331 FGD6Q6ZV73 1430 aa17.4■□□□□ 0.38
CDCA8-201ENST00000327331 PLEKHD1A6NEE1 506 aa17.39■□□□□ 0.37
CDCA8-201ENST00000327331 MYOM3Q5VTT5 1437 aa17.39■□□□□ 0.37
CDCA8-201ENST00000327331 TROQ12816 1431 aaPredicted RBP17.38■□□□□ 0.37
CDCA8-201ENST00000327331 ARHGEF11O15085 1522 aa17.38■□□□□ 0.37
CDCA8-201ENST00000327331 ABCC2Q92887 1545 aa17.38■□□□□ 0.37
CDCA8-201ENST00000327331 KIF14Q15058 1648 aa17.37■□□□□ 0.37
CDCA8-201ENST00000327331 CCER1Q8TC90 406 aaPredicted RBP17.34■□□□□ 0.37
CDCA8-201ENST00000327331 KCNH8Q96L42 1107 aa17.32■□□□□ 0.36
CDCA8-201ENST00000327331 ZNF644Q9H582 1327 aaPredicted RBP17.32■□□□□ 0.36
CDCA8-201ENST00000327331 ZNF777Q9ULD5 760 aaPredicted RBP17.3■□□□□ 0.36
CDCA8-201ENST00000327331 ADCY10Q96PN6 1610 aa17.3■□□□□ 0.36
CDCA8-201ENST00000327331 PTPN23Q9H3S7 1636 aa17.3■□□□□ 0.36
CDCA8-201ENST00000327331 ZCCHC11Q5TAX3 1644 aaKnown RBP17.29■□□□□ 0.36
CDCA8-201ENST00000327331 UHRF1BP1LA0JNW5 1464 aa17.27■□□□□ 0.36
CDCA8-201ENST00000327331 PTPRKQ15262 1439 aa17.27■□□□□ 0.36
CDCA8-201ENST00000327331 CHIC2Q9UKJ5 165 aa17.27■□□□□ 0.35
CDCA8-201ENST00000327331 CFDP1Q9UEE9 299 aaPredicted RBP17.26■□□□□ 0.35
CDCA8-201ENST00000327331 GPATCH8Q9UKJ3 1502 aaKnown RBP17.26■□□□□ 0.35
CDCA8-201ENST00000327331 KDM5BQ9UGL1 1544 aa17.25■□□□□ 0.35
CDCA8-201ENST00000327331 ABCC10Q5T3U5 1492 aa17.24■□□□□ 0.35
CDCA8-201ENST00000327331 CYB5RLQ6IPT4 315 aa17.23■□□□□ 0.35
CDCA8-201ENST00000327331 MIA2Q96PC5 1412 aa17.23■□□□□ 0.35
CDCA8-201ENST00000327331 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.22■□□□□ 0.35
CDCA8-201ENST00000327331 TCOF1Q13428 1488 aaKnown RBP17.22■□□□□ 0.35
CDCA8-201ENST00000327331 ACIN1Q9UKV3 1341 aaKnown RBP17.21■□□□□ 0.35
CDCA8-201ENST00000327331 TTC37Q6PGP7 1564 aa17.2■□□□□ 0.34
CDCA8-201ENST00000327331 RAB3GAP2Q9H2M9 1393 aa17.2■□□□□ 0.34
CDCA8-201ENST00000327331 RRP7BPQ9NSQ0 103 aa17.19■□□□□ 0.34
CDCA8-201ENST00000327331 CDC42BPAQ5VT25 1732 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms