RNA–Protein interactions for RNA: ENST00000327154.10

RPAIN-201, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-201ENST00000327154 RUSC2Q8N2Y8 1516 aa24.38■■□□□ 1.49
RPAIN-201ENST00000327154 CARMIL1Q5VZK9 1371 aa24.38■■□□□ 1.49
RPAIN-201ENST00000327154 KIAA0586Q9BVV6 1533 aa24.36■■□□□ 1.49
RPAIN-201ENST00000327154 CUL7Q14999 1698 aa24.34■■□□□ 1.49
RPAIN-201ENST00000327154 NPM1P06748 294 aaKnown RBP eCLIP24.27■■□□□ 1.48
RPAIN-201ENST00000327154 TTBK1Q5TCY1 1321 aaPredicted RBP24.2■■□□□ 1.46
RPAIN-201ENST00000327154 PTPRGP23470 1445 aa24.17■■□□□ 1.46
RPAIN-201ENST00000327154 FAM69CQ0P6D2 419 aa24.15■■□□□ 1.46
RPAIN-201ENST00000327154 CARMIL2Q6F5E8 1435 aa24.13■■□□□ 1.45
RPAIN-201ENST00000327154 ADCY10Q96PN6 1610 aa24.13■■□□□ 1.45
RPAIN-201ENST00000327154 RAPGEF2Q9Y4G8 1499 aa24.13■■□□□ 1.45
RPAIN-201ENST00000327154 TNIKQ9UKE5 1360 aa24.11■■□□□ 1.45
RPAIN-201ENST00000327154 IQGAP2Q13576 1575 aa24.09■■□□□ 1.45
RPAIN-201ENST00000327154 ABCC10Q5T3U5 1492 aa24.08■■□□□ 1.45
RPAIN-201ENST00000327154 MAPKBP1O60336 1514 aa24.07■■□□□ 1.44
RPAIN-201ENST00000327154 KIF13AQ9H1H9 1805 aa24.05■■□□□ 1.44
RPAIN-201ENST00000327154 DISP1Q96F81 1524 aa24.01■■□□□ 1.43
RPAIN-201ENST00000327154 AEBP2Q6ZN18 517 aaPredicted RBP23.97■■□□□ 1.43
RPAIN-201ENST00000327154 DIP2BQ9P265 1576 aa23.96■■□□□ 1.43
RPAIN-201ENST00000327154 UGGT2Q9NYU1 1516 aa23.96■■□□□ 1.43
RPAIN-201ENST00000327154 ABCC2Q92887 1545 aa23.95■■□□□ 1.43
RPAIN-201ENST00000327154 UACAQ9BZF9 1416 aa23.95■■□□□ 1.42
RPAIN-201ENST00000327154 UHRF1BP1LA0JNW5 1464 aa23.92■■□□□ 1.42
RPAIN-201ENST00000327154 PRXQ9BXM0 1461 aa23.91■■□□□ 1.42
RPAIN-201ENST00000327154 ASXL2Q76L83 1435 aa23.89■■□□□ 1.41
RPAIN-201ENST00000327154 KIAA0556O60303 1618 aa23.86■■□□□ 1.41
RPAIN-201ENST00000327154 PLB1Q6P1J6 1458 aa23.86■■□□□ 1.41
RPAIN-201ENST00000327154 CSRNP3Q8WYN3 585 aa23.85■■□□□ 1.41
RPAIN-201ENST00000327154 KDM5BQ9UGL1 1544 aa23.81■■□□□ 1.4
RPAIN-201ENST00000327154 GOLGA3Q08378 1498 aa23.81■■□□□ 1.4
RPAIN-201ENST00000327154 CTTNBP2Q8WZ74 1663 aa23.78■■□□□ 1.4
RPAIN-201ENST00000327154 TSPOAP1O95153 1857 aa23.78■■□□□ 1.4
RPAIN-201ENST00000327154 P3H3Q8IVL6 736 aa23.75■■□□□ 1.39
RPAIN-201ENST00000327154 GLI2P10070 1586 aa23.74■■□□□ 1.39
RPAIN-201ENST00000327154 KDM6BO15054 1643 aa23.73■■□□□ 1.39
RPAIN-201ENST00000327154 EPRSP07814 1512 aaKnown RBP23.73■■□□□ 1.39
RPAIN-201ENST00000327154 ZCCHC11Q5TAX3 1644 aaKnown RBP23.71■■□□□ 1.39
RPAIN-201ENST00000327154 FAM9AQ8IZU1 332 aaPredicted RBP23.71■■□□□ 1.39
RPAIN-201ENST00000327154 EEA1Q15075 1411 aa23.67■■□□□ 1.38
RPAIN-201ENST00000327154 ABCA8O94911 1581 aa23.66■■□□□ 1.38
RPAIN-201ENST00000327154 KCNH8Q96L42 1107 aa23.66■■□□□ 1.38
RPAIN-201ENST00000327154 WDR7Q9Y4E6 1490 aa23.65■■□□□ 1.38
RPAIN-201ENST00000327154 ARID3CA6NKF2 412 aa23.63■■□□□ 1.37
RPAIN-201ENST00000327154 RANGAP1P46060 587 aaPredicted RBP23.63■■□□□ 1.37
RPAIN-201ENST00000327154 PPRC1Q5VV67 1664 aaKnown RBP23.62■■□□□ 1.37
RPAIN-201ENST00000327154 MAP3K4Q9Y6R4 1608 aa23.59■■□□□ 1.37
RPAIN-201ENST00000327154 COL17A1Q9UMD9 1497 aaPredicted RBP23.58■■□□□ 1.37
RPAIN-201ENST00000327154 KDM4FA0A1W2PPD8 638 aa23.58■■□□□ 1.37
RPAIN-201ENST00000327154 TEX14Q8IWB6 1497 aa23.57■■□□□ 1.36
RPAIN-201ENST00000327154 CD109Q6YHK3 1445 aa23.54■■□□□ 1.36
RPAIN-201ENST00000327154 ATP10BO94823 1461 aa23.54■■□□□ 1.36
RPAIN-201ENST00000327154 CHIC1Q5VXU3 224 aa23.52■■□□□ 1.36
RPAIN-201ENST00000327154 SAMD9Q5K651 1589 aa23.51■■□□□ 1.35
RPAIN-201ENST00000327154 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.48■■□□□ 1.35
RPAIN-201ENST00000327154 HNRNPUL2Q1KMD3 747 aaKnown RBP23.48■■□□□ 1.35
RPAIN-201ENST00000327154 EHMT2Q96KQ7 1210 aa23.48■■□□□ 1.35
RPAIN-201ENST00000327154 MAGI3Q5TCQ9 1506 aa23.47■■□□□ 1.35
RPAIN-201ENST00000327154 FHOD3Q2V2M9 1422 aa23.45■■□□□ 1.34
RPAIN-201ENST00000327154 UBTFP17480 764 aaKnown RBP23.42■■□□□ 1.34
RPAIN-201ENST00000327154 CFAP43Q8NDM7 1665 aa23.41■■□□□ 1.34
RPAIN-201ENST00000327154 KIF21BO75037 1637 aa23.41■■□□□ 1.34
RPAIN-201ENST00000327154 RAPGEF6Q8TEU7 1601 aa23.41■■□□□ 1.34
RPAIN-201ENST00000327154 NUP153P49790 1475 aaKnown RBP23.37■■□□□ 1.33
RPAIN-201ENST00000327154 PLEKHD1A6NEE1 506 aa23.35■■□□□ 1.33
RPAIN-201ENST00000327154 ADGRL1O94910 1474 aa23.33■■□□□ 1.33
RPAIN-201ENST00000327154 EFCAB5A4FU69 1503 aa23.31■■□□□ 1.32
RPAIN-201ENST00000327154 ABCA9Q8IUA7 1624 aa23.29■■□□□ 1.32
RPAIN-201ENST00000327154 ARAP3Q8WWN8 1544 aa23.28■■□□□ 1.32
RPAIN-201ENST00000327154 PHLDB1Q86UU1 1377 aa23.27■■□□□ 1.32
RPAIN-201ENST00000327154 RAPGEF3O95398 923 aa23.25■■□□□ 1.31
RPAIN-201ENST00000327154 ATP1B4Q9UN42 357 aaPredicted RBP23.25■■□□□ 1.31
RPAIN-201ENST00000327154 NEO1Q92859 1461 aa23.2■■□□□ 1.3
RPAIN-201ENST00000327154 ARHGAP35Q9NRY4 1499 aa23.18■■□□□ 1.3
RPAIN-201ENST00000327154 FMN1Q68DA7 1419 aa23.17■■□□□ 1.3
RPAIN-201ENST00000327154 CDK13Q14004 1512 aaKnown RBP23.16■■□□□ 1.3
RPAIN-201ENST00000327154 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.13■■□□□ 1.29
RPAIN-201ENST00000327154 AKNAQ7Z591 1439 aa23.11■■□□□ 1.29
RPAIN-201ENST00000327154 CDK11AQ9UQ88 783 aaPredicted RBP23.1■■□□□ 1.29
RPAIN-201ENST00000327154 FANCAO15360 1455 aa23.1■■□□□ 1.29
RPAIN-201ENST00000327154 DENND4BO75064 1496 aaPredicted RBP23.07■■□□□ 1.28
RPAIN-201ENST00000327154 TTC37Q6PGP7 1564 aa23.06■■□□□ 1.28
RPAIN-201ENST00000327154 ARID4BQ4LE39 1312 aaPredicted RBP23.05■■□□□ 1.28
RPAIN-201ENST00000327154 HECW1Q76N89 1606 aa23.04■■□□□ 1.28
RPAIN-201ENST00000327154 FRMPD1Q5SYB0 1578 aa23.04■■□□□ 1.28
RPAIN-201ENST00000327154 PLCH2O75038 1416 aa23.03■■□□□ 1.28
RPAIN-201ENST00000327154 EFCAB2Q5VUJ9 269 aa22.99■■□□□ 1.27
RPAIN-201ENST00000327154 CFAP74Q9C0B2 1584 aa22.98■■□□□ 1.27
RPAIN-201ENST00000327154 SCAPERQ9BY12 1400 aa22.98■■□□□ 1.27
RPAIN-201ENST00000327154 TROQ12816 1431 aaPredicted RBP22.97■■□□□ 1.27
RPAIN-201ENST00000327154 RICTORQ6R327 1708 aa22.94■■□□□ 1.26
RPAIN-201ENST00000327154 HECW2Q9P2P5 1572 aa22.94■■□□□ 1.26
RPAIN-201ENST00000327154 CASKIN1Q8WXD9 1431 aa22.94■■□□□ 1.26
RPAIN-201ENST00000327154 CLIP1P30622 1438 aa22.93■■□□□ 1.26
RPAIN-201ENST00000327154 PTPRMP28827 1452 aa22.92■■□□□ 1.26
RPAIN-201ENST00000327154 YEATS2Q9ULM3 1422 aa22.91■■□□□ 1.26
RPAIN-201ENST00000327154 ADAMTSL3P82987 1691 aa22.91■■□□□ 1.26
RPAIN-201ENST00000327154 KIF14Q15058 1648 aa22.91■■□□□ 1.26
RPAIN-201ENST00000327154 ARHGEF40Q8TER5 1519 aa22.9■■□□□ 1.26
RPAIN-201ENST00000327154 POGZQ7Z3K3 1410 aa22.9■■□□□ 1.26
RPAIN-201ENST00000327154 MAGI2Q86UL8 1455 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 152.7 ms