RNA–Protein interactions for RNA: ENST00000326298.8

CCNC-201, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 2,212 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-201ENST00000326298 KIF27Q86VH2 1401 aa14.2□□□□□ -0.14
CCNC-201ENST00000326298 CARMIL1Q5VZK9 1371 aa14.13□□□□□ -0.15
CCNC-201ENST00000326298 KIAA0586Q9BVV6 1533 aa14.13□□□□□ -0.15
CCNC-201ENST00000326298 CUL7Q14999 1698 aa14.12□□□□□ -0.15
CCNC-201ENST00000326298 TTBK1Q5TCY1 1321 aaPredicted RBP14.08□□□□□ -0.16
CCNC-201ENST00000326298 ADCY10Q96PN6 1610 aa14.07□□□□□ -0.16
CCNC-201ENST00000326298 KIF13AQ9H1H9 1805 aa14.06□□□□□ -0.16
CCNC-201ENST00000326298 FAM69CQ0P6D2 419 aa14□□□□□ -0.17
CCNC-201ENST00000326298 PTPRGP23470 1445 aa14□□□□□ -0.17
CCNC-201ENST00000326298 IQGAP2Q13576 1575 aa14□□□□□ -0.17
CCNC-201ENST00000326298 DISP1Q96F81 1524 aa13.99□□□□□ -0.17
CCNC-201ENST00000326298 ABCC10Q5T3U5 1492 aa13.98□□□□□ -0.17
CCNC-201ENST00000326298 RAPGEF2Q9Y4G8 1499 aa13.98□□□□□ -0.17
CCNC-201ENST00000326298 MAPKBP1O60336 1514 aa13.98□□□□□ -0.17
CCNC-201ENST00000326298 NPM1P06748 294 aaKnown RBP eCLIP13.96□□□□□ -0.17
CCNC-201ENST00000326298 DIP2BQ9P265 1576 aa13.96□□□□□ -0.17
CCNC-201ENST00000326298 TNIKQ9UKE5 1360 aa13.95□□□□□ -0.18
CCNC-201ENST00000326298 CARMIL2Q6F5E8 1435 aa13.93□□□□□ -0.18
CCNC-201ENST00000326298 UGGT2Q9NYU1 1516 aa13.92□□□□□ -0.18
CCNC-201ENST00000326298 ABCC2Q92887 1545 aa13.9□□□□□ -0.18
CCNC-201ENST00000326298 PRXQ9BXM0 1461 aa13.9□□□□□ -0.18
CCNC-201ENST00000326298 KIAA0556O60303 1618 aa13.89□□□□□ -0.19
CCNC-201ENST00000326298 UACAQ9BZF9 1416 aa13.88□□□□□ -0.19
CCNC-201ENST00000326298 TSPOAP1O95153 1857 aa13.88□□□□□ -0.19
CCNC-201ENST00000326298 ASXL2Q76L83 1435 aa13.88□□□□□ -0.19
CCNC-201ENST00000326298 UHRF1BP1LA0JNW5 1464 aa13.86□□□□□ -0.19
CCNC-201ENST00000326298 PLB1Q6P1J6 1458 aa13.85□□□□□ -0.19
CCNC-201ENST00000326298 CTTNBP2Q8WZ74 1663 aa13.85□□□□□ -0.19
CCNC-201ENST00000326298 KDM5BQ9UGL1 1544 aa13.83□□□□□ -0.2
CCNC-201ENST00000326298 AEBP2Q6ZN18 517 aaPredicted RBP13.82□□□□□ -0.2
CCNC-201ENST00000326298 PPRC1Q5VV67 1664 aaKnown RBP13.81□□□□□ -0.2
CCNC-201ENST00000326298 ZCCHC11Q5TAX3 1644 aaKnown RBP13.81□□□□□ -0.2
CCNC-201ENST00000326298 P3H3Q8IVL6 736 aa13.81□□□□□ -0.2
CCNC-201ENST00000326298 CSRNP3Q8WYN3 585 aa13.8□□□□□ -0.2
CCNC-201ENST00000326298 KDM6BO15054 1643 aa13.79□□□□□ -0.2
CCNC-201ENST00000326298 FAM9AQ8IZU1 332 aaPredicted RBP13.79□□□□□ -0.2
CCNC-201ENST00000326298 EPRSP07814 1512 aaKnown RBP13.79□□□□□ -0.2
CCNC-201ENST00000326298 COL17A1Q9UMD9 1497 aaPredicted RBP13.79□□□□□ -0.2
CCNC-201ENST00000326298 ARID3CA6NKF2 412 aa13.78□□□□□ -0.2
CCNC-201ENST00000326298 ABCA8O94911 1581 aa13.77□□□□□ -0.21
CCNC-201ENST00000326298 GLI2P10070 1586 aa13.77□□□□□ -0.21
CCNC-201ENST00000326298 RANGAP1P46060 587 aaPredicted RBP13.75□□□□□ -0.21
CCNC-201ENST00000326298 GOLGA3Q08378 1498 aa13.74□□□□□ -0.21
CCNC-201ENST00000326298 KDM4FA0A1W2PPD8 638 aa13.74□□□□□ -0.21
CCNC-201ENST00000326298 MAP3K4Q9Y6R4 1608 aa13.74□□□□□ -0.21
CCNC-201ENST00000326298 WDR7Q9Y4E6 1490 aa13.73□□□□□ -0.21
CCNC-201ENST00000326298 KCNH8Q96L42 1107 aa13.72□□□□□ -0.21
CCNC-201ENST00000326298 EHMT2Q96KQ7 1210 aa13.71□□□□□ -0.21
CCNC-201ENST00000326298 SAMD9Q5K651 1589 aa13.69□□□□□ -0.22
CCNC-201ENST00000326298 ATP10BO94823 1461 aa13.68□□□□□ -0.22
CCNC-201ENST00000326298 CHIC1Q5VXU3 224 aa13.67□□□□□ -0.22
CCNC-201ENST00000326298 FHOD3Q2V2M9 1422 aa13.66□□□□□ -0.22
CCNC-201ENST00000326298 EEA1Q15075 1411 aa13.64□□□□□ -0.23
CCNC-201ENST00000326298 CD109Q6YHK3 1445 aa13.64□□□□□ -0.23
CCNC-201ENST00000326298 NUP153P49790 1475 aaKnown RBP13.62□□□□□ -0.23
CCNC-201ENST00000326298 TEX14Q8IWB6 1497 aa13.61□□□□□ -0.23
CCNC-201ENST00000326298 RAPGEF6Q8TEU7 1601 aa13.61□□□□□ -0.23
CCNC-201ENST00000326298 MAGI3Q5TCQ9 1506 aa13.6□□□□□ -0.23
CCNC-201ENST00000326298 KIF21BO75037 1637 aa13.6□□□□□ -0.23
CCNC-201ENST00000326298 CFAP43Q8NDM7 1665 aa13.6□□□□□ -0.23
CCNC-201ENST00000326298 ADGRL1O94910 1474 aa13.58□□□□□ -0.24
CCNC-201ENST00000326298 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.58□□□□□ -0.24
CCNC-201ENST00000326298 HNRNPUL2Q1KMD3 747 aaKnown RBP13.58□□□□□ -0.24
CCNC-201ENST00000326298 ABCA9Q8IUA7 1624 aa13.54□□□□□ -0.24
CCNC-201ENST00000326298 UBTFP17480 764 aaKnown RBP13.54□□□□□ -0.24
CCNC-201ENST00000326298 RAPGEF3O95398 923 aa13.52□□□□□ -0.24
CCNC-201ENST00000326298 CDK13Q14004 1512 aaKnown RBP13.52□□□□□ -0.25
CCNC-201ENST00000326298 ARHGAP35Q9NRY4 1499 aa13.5□□□□□ -0.25
CCNC-201ENST00000326298 EFCAB5A4FU69 1503 aa13.5□□□□□ -0.25
CCNC-201ENST00000326298 ARAP3Q8WWN8 1544 aa13.5□□□□□ -0.25
CCNC-201ENST00000326298 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.47□□□□□ -0.25
CCNC-201ENST00000326298 FRMPD1Q5SYB0 1578 aa13.47□□□□□ -0.25
CCNC-201ENST00000326298 PLEKHD1A6NEE1 506 aa13.47□□□□□ -0.25
CCNC-201ENST00000326298 TTC37Q6PGP7 1564 aa13.46□□□□□ -0.25
CCNC-201ENST00000326298 ATP1B4Q9UN42 357 aaPredicted RBP13.45□□□□□ -0.26
CCNC-201ENST00000326298 NEO1Q92859 1461 aa13.43□□□□□ -0.26
CCNC-201ENST00000326298 LRRIQ1Q96JM4 1722 aa13.41□□□□□ -0.26
CCNC-201ENST00000326298 FANCAO15360 1455 aa13.4□□□□□ -0.26
CCNC-201ENST00000326298 AKNAQ7Z591 1439 aa13.4□□□□□ -0.26
CCNC-201ENST00000326298 FMN1Q68DA7 1419 aa13.39□□□□□ -0.27
CCNC-201ENST00000326298 PHLDB1Q86UU1 1377 aa13.39□□□□□ -0.27
CCNC-201ENST00000326298 KIF14Q15058 1648 aa13.38□□□□□ -0.27
CCNC-201ENST00000326298 RICTORQ6R327 1708 aa13.38□□□□□ -0.27
CCNC-201ENST00000326298 HECW1Q76N89 1606 aa13.37□□□□□ -0.27
CCNC-201ENST00000326298 HECW2Q9P2P5 1572 aa13.37□□□□□ -0.27
CCNC-201ENST00000326298 SIGLEC1Q9BZZ2 1709 aa13.37□□□□□ -0.27
CCNC-201ENST00000326298 YEATS2Q9ULM3 1422 aa13.36□□□□□ -0.27
CCNC-201ENST00000326298 DENND4BO75064 1496 aaPredicted RBP13.36□□□□□ -0.27
CCNC-201ENST00000326298 PLCH2O75038 1416 aa13.35□□□□□ -0.27
CCNC-201ENST00000326298 PCF11O94913 1555 aaKnown RBP13.34□□□□□ -0.27
CCNC-201ENST00000326298 ADAMTSL3P82987 1691 aa13.34□□□□□ -0.27
CCNC-201ENST00000326298 ARID4BQ4LE39 1312 aaPredicted RBP13.33□□□□□ -0.28
CCNC-201ENST00000326298 SCAPERQ9BY12 1400 aa13.33□□□□□ -0.28
CCNC-201ENST00000326298 PTPRMP28827 1452 aa13.32□□□□□ -0.28
CCNC-201ENST00000326298 ARHGEF40Q8TER5 1519 aa13.32□□□□□ -0.28
CCNC-201ENST00000326298 TROQ12816 1431 aaPredicted RBP13.32□□□□□ -0.28
CCNC-201ENST00000326298 BCORL1Q5H9F3 1711 aa13.31□□□□□ -0.28
CCNC-201ENST00000326298 MADDQ8WXG6 1647 aa13.31□□□□□ -0.28
CCNC-201ENST00000326298 CASKIN1Q8WXD9 1431 aa13.3□□□□□ -0.28
CCNC-201ENST00000326298 POGZQ7Z3K3 1410 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms