RNA–Protein interactions for RNA: ENST00000325180.12

GGA1-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene GGA1, Length 2,528 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-201ENST00000325180 CHD1O14646 1710 aa22.29■■□□□ 1.16
GGA1-201ENST00000325180 CEP170Q5SW79 1584 aa22.25■■□□□ 1.15
GGA1-201ENST00000325180 P3H3Q8IVL6 736 aa22.23■■□□□ 1.15
GGA1-201ENST00000325180 CTTNBP2Q8WZ74 1663 aa22.22■■□□□ 1.15
GGA1-201ENST00000325180 CLIP1P30622 1438 aa22.22■■□□□ 1.15
GGA1-201ENST00000325180 NUP160Q12769 1436 aa22.17■■□□□ 1.14
GGA1-201ENST00000325180 KIAA0586Q9BVV6 1533 aa22.14■■□□□ 1.14
GGA1-201ENST00000325180 IQGAP2Q13576 1575 aa22.13■■□□□ 1.13
GGA1-201ENST00000325180 ARHGAP35Q9NRY4 1499 aa22.13■■□□□ 1.13
GGA1-201ENST00000325180 JPH4Q96JJ6 628 aa22.1■■□□□ 1.13
GGA1-201ENST00000325180 TTBK1Q5TCY1 1321 aaPredicted RBP22.09■■□□□ 1.13
GGA1-201ENST00000325180 ARAP1Q96P48 1450 aa22.09■■□□□ 1.13
GGA1-201ENST00000325180 FHOD3Q2V2M9 1422 aa22.06■■□□□ 1.12
GGA1-201ENST00000325180 OSCARQ8IYS5 282 aa22.04■■□□□ 1.12
GGA1-201ENST00000325180 UGGT2Q9NYU1 1516 aa22■■□□□ 1.11
GGA1-201ENST00000325180 DISP1Q96F81 1524 aa21.99■■□□□ 1.11
GGA1-201ENST00000325180 SAMD9Q5K651 1589 aa21.98■■□□□ 1.11
GGA1-201ENST00000325180 CLASP1Q7Z460 1538 aa21.98■■□□□ 1.11
GGA1-201ENST00000325180 PPARGC1BQ86YN6 1023 aaKnown RBP21.98■■□□□ 1.11
GGA1-201ENST00000325180 PRG4Q92954 1404 aaPredicted RBP21.97■■□□□ 1.11
GGA1-201ENST00000325180 ERCC6L2Q5T890 1561 aa21.95■■□□□ 1.1
GGA1-201ENST00000325180 EFCAB5A4FU69 1503 aa21.94■■□□□ 1.1
GGA1-201ENST00000325180 VPS8Q8N3P4 1428 aa21.93■■□□□ 1.1
GGA1-201ENST00000325180 ATP1B4Q9UN42 357 aaPredicted RBP21.92■■□□□ 1.1
GGA1-201ENST00000325180 KIAA0556O60303 1618 aa21.92■■□□□ 1.1
GGA1-201ENST00000325180 SHROOM2Q13796 1616 aa21.89■■□□□ 1.09
GGA1-201ENST00000325180 CARMIL2Q6F5E8 1435 aa21.87■■□□□ 1.09
GGA1-201ENST00000325180 ARID3CA6NKF2 412 aa21.86■■□□□ 1.09
GGA1-201ENST00000325180 PCF11O94913 1555 aaKnown RBP21.8■■□□□ 1.08
GGA1-201ENST00000325180 FMN1Q68DA7 1419 aa21.8■■□□□ 1.08
GGA1-201ENST00000325180 PLB1Q6P1J6 1458 aa21.77■■□□□ 1.08
GGA1-201ENST00000325180 PTPRGP23470 1445 aa21.77■■□□□ 1.08
GGA1-201ENST00000325180 CASKIN1Q8WXD9 1431 aa21.74■■□□□ 1.07
GGA1-201ENST00000325180 APLP2Q06481 763 aa21.73■■□□□ 1.07
GGA1-201ENST00000325180 KANK4Q5T7N3 995 aaPredicted RBP21.73■■□□□ 1.07
GGA1-201ENST00000325180 LRRIQ1Q96JM4 1722 aa21.69■■□□□ 1.06
GGA1-201ENST00000325180 FYCO1Q9BQS8 1478 aa21.68■■□□□ 1.06
GGA1-201ENST00000325180 ARHGEF11O15085 1522 aa21.66■■□□□ 1.06
GGA1-201ENST00000325180 RAPGEF6Q8TEU7 1601 aa21.66■■□□□ 1.06
GGA1-201ENST00000325180 NUP153P49790 1475 aaKnown RBP21.65■■□□□ 1.06
GGA1-201ENST00000325180 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.65■■□□□ 1.06
GGA1-201ENST00000325180 HNRNPUL2Q1KMD3 747 aaKnown RBP21.65■■□□□ 1.06
GGA1-201ENST00000325180 CDK13Q14004 1512 aaKnown RBP21.64■■□□□ 1.06
GGA1-201ENST00000325180 ABCA8O94911 1581 aa21.62■■□□□ 1.05
GGA1-201ENST00000325180 EPRSP07814 1512 aaKnown RBP21.61■■□□□ 1.05
GGA1-201ENST00000325180 UACAQ9BZF9 1416 aa21.61■■□□□ 1.05
GGA1-201ENST00000325180 TIAM1Q13009 1591 aa21.6■■□□□ 1.05
GGA1-201ENST00000325180 HECW1Q76N89 1606 aa21.6■■□□□ 1.05
GGA1-201ENST00000325180 CYB5RLQ6IPT4 315 aa21.59■■□□□ 1.05
GGA1-201ENST00000325180 RIMBP3CA6NJZ7 1639 aa21.58■■□□□ 1.05
GGA1-201ENST00000325180 RIMBP3BA6NNM3 1639 aa21.58■■□□□ 1.05
GGA1-201ENST00000325180 RIMBP3Q9UFD9 1639 aa21.58■■□□□ 1.05
GGA1-201ENST00000325180 ATP10BO94823 1461 aa21.54■■□□□ 1.04
GGA1-201ENST00000325180 MAGI3Q5TCQ9 1506 aa21.54■■□□□ 1.04
GGA1-201ENST00000325180 CFAP43Q8NDM7 1665 aa21.53■■□□□ 1.04
GGA1-201ENST00000325180 LRRC9Q6ZRR7 1453 aa21.53■■□□□ 1.04
GGA1-201ENST00000325180 ABCC2Q92887 1545 aa21.52■■□□□ 1.04
GGA1-201ENST00000325180 ADCY10Q96PN6 1610 aa21.5■■□□□ 1.03
GGA1-201ENST00000325180 MAP3K1Q13233 1512 aa21.5■■□□□ 1.03
GGA1-201ENST00000325180 CCDC18Q5T9S5 1454 aa21.5■■□□□ 1.03
GGA1-201ENST00000325180 MTUS2Q5JR59 1369 aa21.5■■□□□ 1.03
GGA1-201ENST00000325180 UHRF1BP1LA0JNW5 1464 aa21.44■■□□□ 1.02
GGA1-201ENST00000325180 PLEKHD1A6NEE1 506 aa21.42■■□□□ 1.02
GGA1-201ENST00000325180 ZCCHC11Q5TAX3 1644 aaKnown RBP21.41■■□□□ 1.02
GGA1-201ENST00000325180 PCGF6Q9BYE7 350 aa21.41■■□□□ 1.02
GGA1-201ENST00000325180 CDK11AQ9UQ88 783 aaPredicted RBP21.41■■□□□ 1.02
GGA1-201ENST00000325180 KDM5BQ9UGL1 1544 aa21.4■■□□□ 1.02
GGA1-201ENST00000325180 KCNH8Q96L42 1107 aa21.4■■□□□ 1.02
GGA1-201ENST00000325180 PHLDB1Q86UU1 1377 aa21.39■■□□□ 1.01
GGA1-201ENST00000325180 TRIM26Q12899 539 aaPredicted RBP21.37■■□□□ 1.01
GGA1-201ENST00000325180 EHBP1L1Q8N3D4 1523 aa21.37■■□□□ 1.01
GGA1-201ENST00000325180 NCOA2Q15596 1464 aa21.36■■□□□ 1.01
GGA1-201ENST00000325180 TROQ12816 1431 aaPredicted RBP21.36■■□□□ 1.01
GGA1-201ENST00000325180 NPM1P06748 294 aaKnown RBP eCLIP21.35■■□□□ 1.01
GGA1-201ENST00000325180 KIF14Q15058 1648 aa21.34■■□□□ 1.01
GGA1-201ENST00000325180 DNAJC5Q9H3Z4 198 aa21.33■■□□□ 1.01
GGA1-201ENST00000325180 SUPT6HQ7KZ85 1726 aaKnown RBP21.31■■□□□ 1
GGA1-201ENST00000325180 ASXL2Q76L83 1435 aa21.28■■□□□ 1
GGA1-201ENST00000325180 FAM50AQ14320 339 aaKnown RBP21.23■□□□□ 0.99
GGA1-201ENST00000325180 WDR7Q9Y4E6 1490 aa21.23■□□□□ 0.99
GGA1-201ENST00000325180 ITGAEP38570 1179 aa21.23■□□□□ 0.99
GGA1-201ENST00000325180 CCNB3Q8WWL7 1395 aa21.22■□□□□ 0.99
GGA1-201ENST00000325180 MYOM3Q5VTT5 1437 aa21.21■□□□□ 0.99
GGA1-201ENST00000325180 ZNF644Q9H582 1327 aaPredicted RBP21.21■□□□□ 0.99
GGA1-201ENST00000325180 ABCC10Q5T3U5 1492 aa21.21■□□□□ 0.99
GGA1-201ENST00000325180 ZNF777Q9ULD5 760 aaPredicted RBP21.2■□□□□ 0.98
GGA1-201ENST00000325180 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.19■□□□□ 0.98
GGA1-201ENST00000325180 TTC37Q6PGP7 1564 aa21.19■□□□□ 0.98
GGA1-201ENST00000325180 FGD6Q6ZV73 1430 aa21.19■□□□□ 0.98
GGA1-201ENST00000325180 RRBP1Q9P2E9 1410 aaKnown RBP21.19■□□□□ 0.98
GGA1-201ENST00000325180 GPATCH8Q9UKJ3 1502 aaKnown RBP21.18■□□□□ 0.98
GGA1-201ENST00000325180 CFDP1Q9UEE9 299 aaPredicted RBP21.16■□□□□ 0.98
GGA1-201ENST00000325180 CDC42BPAQ5VT25 1732 aa21.14■□□□□ 0.97
GGA1-201ENST00000325180 MAPKBP1O60336 1514 aa21.1■□□□□ 0.97
GGA1-201ENST00000325180 PTPN23Q9H3S7 1636 aa21.1■□□□□ 0.97
GGA1-201ENST00000325180 CDC42BPBQ9Y5S2 1711 aa21.08■□□□□ 0.97
GGA1-201ENST00000325180 FAM69CQ0P6D2 419 aa21.07■□□□□ 0.96
GGA1-201ENST00000325180 MIA2Q96PC5 1412 aa21.06■□□□□ 0.96
GGA1-201ENST00000325180 ARHGAP5Q13017 1502 aa21.05■□□□□ 0.96
GGA1-201ENST00000325180 ITSN2Q9NZM3 1697 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms