RNA–Protein interactions for RNA: ENST00000323833.12

TSFM-201, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSFM, Length 1,218 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-201ENST00000323833 RAPGEF2Q9Y4G8 1499 aa25.98■■□□□ 1.75
TSFM-201ENST00000323833 ERCC6L2Q5T890 1561 aa25.98■■□□□ 1.75
TSFM-201ENST00000323833 CYB5RLQ6IPT4 315 aa25.95■■□□□ 1.74
TSFM-201ENST00000323833 KIAA0586Q9BVV6 1533 aa25.93■■□□□ 1.74
TSFM-201ENST00000323833 JPH4Q96JJ6 628 aa25.9■■□□□ 1.74
TSFM-201ENST00000323833 PRXQ9BXM0 1461 aa25.89■■□□□ 1.73
TSFM-201ENST00000323833 EEA1Q15075 1411 aa25.88■■□□□ 1.73
TSFM-201ENST00000323833 PRG4Q92954 1404 aaPredicted RBP25.88■■□□□ 1.73
TSFM-201ENST00000323833 FAM9AQ8IZU1 332 aaPredicted RBP25.87■■□□□ 1.73
TSFM-201ENST00000323833 CSRNP3Q8WYN3 585 aa25.87■■□□□ 1.73
TSFM-201ENST00000323833 CTTNBP2Q8WZ74 1663 aa25.86■■□□□ 1.73
TSFM-201ENST00000323833 IQGAP2Q13576 1575 aa25.84■■□□□ 1.73
TSFM-201ENST00000323833 KIF21BO75037 1637 aa25.69■■□□□ 1.7
TSFM-201ENST00000323833 UGGT2Q9NYU1 1516 aa25.68■■□□□ 1.7
TSFM-201ENST00000323833 CARMIL2Q6F5E8 1435 aa25.64■■□□□ 1.7
TSFM-201ENST00000323833 DISP1Q96F81 1524 aa25.64■■□□□ 1.7
TSFM-201ENST00000323833 KIAA0556O60303 1618 aa25.61■■□□□ 1.69
TSFM-201ENST00000323833 TTBK1Q5TCY1 1321 aaPredicted RBP25.58■■□□□ 1.69
TSFM-201ENST00000323833 EHMT2Q96KQ7 1210 aa25.57■■□□□ 1.68
TSFM-201ENST00000323833 TNIKQ9UKE5 1360 aa25.56■■□□□ 1.68
TSFM-201ENST00000323833 PTPRGP23470 1445 aa25.54■■□□□ 1.68
TSFM-201ENST00000323833 ADCY10Q96PN6 1610 aa25.53■■□□□ 1.68
TSFM-201ENST00000323833 GOLGA3Q08378 1498 aa25.51■■□□□ 1.67
TSFM-201ENST00000323833 SAMD9Q5K651 1589 aa25.45■■□□□ 1.66
TSFM-201ENST00000323833 UBTFP17480 764 aaKnown RBP25.44■■□□□ 1.66
TSFM-201ENST00000323833 RANGAP1P46060 587 aaPredicted RBP25.44■■□□□ 1.66
TSFM-201ENST00000323833 P3H3Q8IVL6 736 aa25.42■■□□□ 1.66
TSFM-201ENST00000323833 TRHP20396 242 aaPredicted RBP25.4■■□□□ 1.66
TSFM-201ENST00000323833 UACAQ9BZF9 1416 aa25.38■■□□□ 1.65
TSFM-201ENST00000323833 NPM1P06748 294 aaKnown RBP eCLIP25.37■■□□□ 1.65
TSFM-201ENST00000323833 ABCC2Q92887 1545 aa25.36■■□□□ 1.65
TSFM-201ENST00000323833 UHRF1BP1LA0JNW5 1464 aa25.35■■□□□ 1.65
TSFM-201ENST00000323833 PLB1Q6P1J6 1458 aa25.33■■□□□ 1.65
TSFM-201ENST00000323833 ABCA8O94911 1581 aa25.31■■□□□ 1.64
TSFM-201ENST00000323833 KIF13AQ9H1H9 1805 aa25.31■■□□□ 1.64
TSFM-201ENST00000323833 EFCAB5A4FU69 1503 aa25.3■■□□□ 1.64
TSFM-201ENST00000323833 MAPKBP1O60336 1514 aa25.3■■□□□ 1.64
TSFM-201ENST00000323833 FHOD3Q2V2M9 1422 aa25.29■■□□□ 1.64
TSFM-201ENST00000323833 ZCCHC11Q5TAX3 1644 aaKnown RBP25.27■■□□□ 1.64
TSFM-201ENST00000323833 KDM5BQ9UGL1 1544 aa25.25■■□□□ 1.63
TSFM-201ENST00000323833 RAPGEF6Q8TEU7 1601 aa25.22■■□□□ 1.63
TSFM-201ENST00000323833 ARHGAP35Q9NRY4 1499 aa25.2■■□□□ 1.62
TSFM-201ENST00000323833 DIP2BQ9P265 1576 aa25.18■■□□□ 1.62
TSFM-201ENST00000323833 ABCC10Q5T3U5 1492 aa25.17■■□□□ 1.62
TSFM-201ENST00000323833 ASXL2Q76L83 1435 aa25.17■■□□□ 1.62
TSFM-201ENST00000323833 ARID3CA6NKF2 412 aa25.13■■□□□ 1.61
TSFM-201ENST00000323833 FAM69CQ0P6D2 419 aa25.12■■□□□ 1.61
TSFM-201ENST00000323833 TSPOAP1O95153 1857 aa25.1■■□□□ 1.61
TSFM-201ENST00000323833 ATP10BO94823 1461 aa25.09■■□□□ 1.61
TSFM-201ENST00000323833 NUP153P49790 1475 aaKnown RBP25.08■■□□□ 1.6
TSFM-201ENST00000323833 LOC105371045A0A1W2PR82 267 aa25.06■■□□□ 1.6
TSFM-201ENST00000323833 CLIP1P30622 1438 aa25.04■■□□□ 1.6
TSFM-201ENST00000323833 FMN1Q68DA7 1419 aa25.04■■□□□ 1.6
TSFM-201ENST00000323833 WDR7Q9Y4E6 1490 aa25.04■■□□□ 1.6
TSFM-201ENST00000323833 EPRSP07814 1512 aaKnown RBP25.02■■□□□ 1.6
TSFM-201ENST00000323833 GLI2P10070 1586 aa25.02■■□□□ 1.6
TSFM-201ENST00000323833 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.99■■□□□ 1.59
TSFM-201ENST00000323833 HNRNPUL2Q1KMD3 747 aaKnown RBP24.99■■□□□ 1.59
TSFM-201ENST00000323833 LRRIQ1Q96JM4 1722 aa24.98■■□□□ 1.59
TSFM-201ENST00000323833 HECW1Q76N89 1606 aa24.98■■□□□ 1.59
TSFM-201ENST00000323833 MAP3K4Q9Y6R4 1608 aa24.97■■□□□ 1.59
TSFM-201ENST00000323833 KCNH8Q96L42 1107 aa24.96■■□□□ 1.59
TSFM-201ENST00000323833 ATP1B4Q9UN42 357 aaPredicted RBP24.96■■□□□ 1.59
TSFM-201ENST00000323833 PPRC1Q5VV67 1664 aaKnown RBP24.95■■□□□ 1.58
TSFM-201ENST00000323833 CDK13Q14004 1512 aaKnown RBP24.95■■□□□ 1.58
TSFM-201ENST00000323833 CEP162Q5TB80 1403 aa24.95■■□□□ 1.58
TSFM-201ENST00000323833 PCF11O94913 1555 aaKnown RBP24.93■■□□□ 1.58
TSFM-201ENST00000323833 CFAP43Q8NDM7 1665 aa24.91■■□□□ 1.58
TSFM-201ENST00000323833 CASKIN1Q8WXD9 1431 aa24.87■■□□□ 1.57
TSFM-201ENST00000323833 PLEKHD1A6NEE1 506 aa24.84■■□□□ 1.57
TSFM-201ENST00000323833 ABCA9Q8IUA7 1624 aa24.83■■□□□ 1.57
TSFM-201ENST00000323833 FYCO1Q9BQS8 1478 aa24.82■■□□□ 1.56
TSFM-201ENST00000323833 CD109Q6YHK3 1445 aa24.8■■□□□ 1.56
TSFM-201ENST00000323833 KDM6BO15054 1643 aa24.78■■□□□ 1.56
TSFM-201ENST00000323833 CCDC18Q5T9S5 1454 aa24.77■■□□□ 1.56
TSFM-201ENST00000323833 TEX14Q8IWB6 1497 aa24.77■■□□□ 1.56
TSFM-201ENST00000323833 MAGI3Q5TCQ9 1506 aa24.75■■□□□ 1.55
TSFM-201ENST00000323833 TTC37Q6PGP7 1564 aa24.73■■□□□ 1.55
TSFM-201ENST00000323833 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.73■■□□□ 1.55
TSFM-201ENST00000323833 CDK11AQ9UQ88 783 aaPredicted RBP24.72■■□□□ 1.55
TSFM-201ENST00000323833 KIF14Q15058 1648 aa24.71■■□□□ 1.55
TSFM-201ENST00000323833 TROQ12816 1431 aaPredicted RBP24.69■■□□□ 1.54
TSFM-201ENST00000323833 COL17A1Q9UMD9 1497 aaPredicted RBP24.65■■□□□ 1.54
TSFM-201ENST00000323833 MYO5CQ9NQX4 1742 aa24.64■■□□□ 1.54
TSFM-201ENST00000323833 VPS8Q8N3P4 1428 aa24.63■■□□□ 1.53
TSFM-201ENST00000323833 NEO1Q92859 1461 aa24.57■■□□□ 1.52
TSFM-201ENST00000323833 CFAP74Q9C0B2 1584 aa24.56■■□□□ 1.52
TSFM-201ENST00000323833 CDC42BPBQ9Y5S2 1711 aa24.55■■□□□ 1.52
TSFM-201ENST00000323833 PHF23Q9BUL5 403 aaPredicted RBP24.55■■□□□ 1.52
TSFM-201ENST00000323833 PLCH2O75038 1416 aa24.54■■□□□ 1.52
TSFM-201ENST00000323833 FANCAO15360 1455 aa24.54■■□□□ 1.52
TSFM-201ENST00000323833 CDC42BPAQ5VT25 1732 aa24.54■■□□□ 1.52
TSFM-201ENST00000323833 ARAP3Q8WWN8 1544 aa24.54■■□□□ 1.52
TSFM-201ENST00000323833 TIAM1Q13009 1591 aa24.53■■□□□ 1.52
TSFM-201ENST00000323833 MTUS2Q5JR59 1369 aa24.51■■□□□ 1.51
TSFM-201ENST00000323833 PHLDB1Q86UU1 1377 aa24.51■■□□□ 1.51
TSFM-201ENST00000323833 PREX2Q70Z35 1606 aa24.5■■□□□ 1.51
TSFM-201ENST00000323833 AKNAQ7Z591 1439 aa24.5■■□□□ 1.51
TSFM-201ENST00000323833 EHBP1L1Q8N3D4 1523 aa24.49■■□□□ 1.51
TSFM-201ENST00000323833 ARHGAP5Q13017 1502 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms