RNA–Protein interactions for RNA: ENST00000323441.10

HIF1A-201, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,555 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-201ENST00000323441 CUX1P39880 1505 aa6.14□□□□□ -1.43
HIF1A-201ENST00000323441 ABCA10Q8WWZ4 1543 aa6.14□□□□□ -1.43
HIF1A-201ENST00000323441 TDRD9Q8NDG6 1382 aaKnown RBP6.13□□□□□ -1.43
HIF1A-201ENST00000323441 TOP2BQ02880 1626 aa6.13□□□□□ -1.43
HIF1A-201ENST00000323441 MAP3K4Q9Y6R4 1608 aa6.13□□□□□ -1.43
HIF1A-201ENST00000323441 TSPOAP1O95153 1857 aa6.13□□□□□ -1.43
HIF1A-201ENST00000323441 SENP3Q9H4L4 574 aaPredicted RBP6.12□□□□□ -1.43
HIF1A-201ENST00000323441 LMTK3Q96Q04 1460 aa6.12□□□□□ -1.43
HIF1A-201ENST00000323441 RUSC2Q8N2Y8 1516 aa6.12□□□□□ -1.43
HIF1A-201ENST00000323441 SOCS7O14512 581 aa6.11□□□□□ -1.43
HIF1A-201ENST00000323441 CHMP7Q8WUX9 453 aaPredicted RBP6.1□□□□□ -1.43
HIF1A-201ENST00000323441 FBLN2P98095 1184 aa6.1□□□□□ -1.43
HIF1A-201ENST00000323441 ADAMTSL3P82987 1691 aa6.08□□□□□ -1.44
HIF1A-201ENST00000323441 ERICH3Q5RHP9 1530 aa6.07□□□□□ -1.44
HIF1A-201ENST00000323441 COL17A1Q9UMD9 1497 aaPredicted RBP6.07□□□□□ -1.44
HIF1A-201ENST00000323441 KIAA0586Q9BVV6 1533 aa6.05□□□□□ -1.44
HIF1A-201ENST00000323441 SPATA31D1Q6ZQQ2 1576 aa6.05□□□□□ -1.44
HIF1A-201ENST00000323441 FAM69CQ0P6D2 419 aa6.05□□□□□ -1.44
HIF1A-201ENST00000323441 FHAD1B1AJZ9 1412 aa6.04□□□□□ -1.44
HIF1A-201ENST00000323441 ILDR2Q71H61 639 aa6.04□□□□□ -1.44
HIF1A-201ENST00000323441 BIVM-ERCC5R4GMW8 1640 aa6.04□□□□□ -1.44
HIF1A-201ENST00000323441 PRG4Q92954 1404 aaPredicted RBP6.04□□□□□ -1.44
HIF1A-201ENST00000323441 UHRF1BP1LA0JNW5 1464 aa6.02□□□□□ -1.45
HIF1A-201ENST00000323441 PCF11O94913 1555 aaKnown RBP6.02□□□□□ -1.45
HIF1A-201ENST00000323441 CUL7Q14999 1698 aa6.02□□□□□ -1.45
HIF1A-201ENST00000323441 KIF21BO75037 1637 aa6.01□□□□□ -1.45
HIF1A-201ENST00000323441 ABCC2Q92887 1545 aa6□□□□□ -1.45
HIF1A-201ENST00000323441 PLB1Q6P1J6 1458 aa6□□□□□ -1.45
HIF1A-201ENST00000323441 BCORL1Q5H9F3 1711 aa5.99□□□□□ -1.45
HIF1A-201ENST00000323441 CFAP43Q8NDM7 1665 aa5.99□□□□□ -1.45
HIF1A-201ENST00000323441 TEX14Q8IWB6 1497 aa5.99□□□□□ -1.45
HIF1A-201ENST00000323441 EPRSP07814 1512 aaKnown RBP5.99□□□□□ -1.45
HIF1A-201ENST00000323441 MAGI3Q5TCQ9 1506 aa5.97□□□□□ -1.45
HIF1A-201ENST00000323441 PTPRMP28827 1452 aa5.97□□□□□ -1.45
HIF1A-201ENST00000323441 KDM5BQ9UGL1 1544 aa5.97□□□□□ -1.45
HIF1A-201ENST00000323441 ASXL2Q76L83 1435 aa5.96□□□□□ -1.46
HIF1A-201ENST00000323441 ZCCHC11Q5TAX3 1644 aaKnown RBP5.96□□□□□ -1.46
HIF1A-201ENST00000323441 ARAP3Q8WWN8 1544 aa5.95□□□□□ -1.46
HIF1A-201ENST00000323441 IQSEC2Q5JU85 1478 aa5.94□□□□□ -1.46
HIF1A-201ENST00000323441 JPH4Q96JJ6 628 aa5.94□□□□□ -1.46
HIF1A-201ENST00000323441 STRCQ7RTU9 1775 aa5.93□□□□□ -1.46
HIF1A-201ENST00000323441 MADDQ8WXG6 1647 aa5.93□□□□□ -1.46
HIF1A-201ENST00000323441 FRMPD1Q5SYB0 1578 aa5.92□□□□□ -1.46
HIF1A-201ENST00000323441 DISP3Q9P2K9 1392 aa5.91□□□□□ -1.46
HIF1A-201ENST00000323441 WRNQ14191 1432 aaPredicted RBP eCLIP5.91□□□□□ -1.46
HIF1A-201ENST00000323441 NPM1P06748 294 aaKnown RBP eCLIP5.9□□□□□ -1.46
HIF1A-201ENST00000323441 PREX1Q8TCU6 1659 aa5.89□□□□□ -1.47
HIF1A-201ENST00000323441 TTC37Q6PGP7 1564 aa5.89□□□□□ -1.47
HIF1A-201ENST00000323441 CERKQ8TCT0 537 aa5.89□□□□□ -1.47
HIF1A-201ENST00000323441 SIGLEC1Q9BZZ2 1709 aa5.89□□□□□ -1.47
HIF1A-201ENST00000323441 RIMS1Q86UR5 1692 aaKnown RBP5.89□□□□□ -1.47
HIF1A-201ENST00000323441 LTBP4Q8N2S1 1624 aa5.88□□□□□ -1.47
HIF1A-201ENST00000323441 DISP1Q96F81 1524 aa5.87□□□□□ -1.47
HIF1A-201ENST00000323441 WDR7Q9Y4E6 1490 aa5.87□□□□□ -1.47
HIF1A-201ENST00000323441 ARHGEF40Q8TER5 1519 aa5.87□□□□□ -1.47
HIF1A-201ENST00000323441 TNIKQ9UKE5 1360 aa5.86□□□□□ -1.47
HIF1A-201ENST00000323441 UACAQ9BZF9 1416 aa5.86□□□□□ -1.47
HIF1A-201ENST00000323441 PHF23Q9BUL5 403 aaPredicted RBP5.86□□□□□ -1.47
HIF1A-201ENST00000323441 ABCA9Q8IUA7 1624 aa5.86□□□□□ -1.47
HIF1A-201ENST00000323441 RICTORQ6R327 1708 aa5.85□□□□□ -1.47
HIF1A-201ENST00000323441 PTPRGP23470 1445 aa5.85□□□□□ -1.47
HIF1A-201ENST00000323441 UGGT2Q9NYU1 1516 aa5.84□□□□□ -1.47
HIF1A-201ENST00000323441 IQGAP2Q13576 1575 aa5.84□□□□□ -1.47
HIF1A-201ENST00000323441 ZMYM4Q5VZL5 1548 aa5.84□□□□□ -1.48
HIF1A-201ENST00000323441 PHLDB1Q86UU1 1377 aa5.83□□□□□ -1.48
HIF1A-201ENST00000323441 FER1L4A9Z1Z3 1794 aa5.83□□□□□ -1.48
HIF1A-201ENST00000323441 ABCA8O94911 1581 aa5.83□□□□□ -1.48
HIF1A-201ENST00000323441 KIAA0556O60303 1618 aa5.83□□□□□ -1.48
HIF1A-201ENST00000323441 MED1Q15648 1581 aaPredicted RBP5.82□□□□□ -1.48
HIF1A-201ENST00000323441 PTPRTO14522 1441 aa5.82□□□□□ -1.48
HIF1A-201ENST00000323441 ARHGEF12Q9NZN5 1544 aa5.8□□□□□ -1.48
HIF1A-201ENST00000323441 NEO1Q92859 1461 aa5.8□□□□□ -1.48
HIF1A-201ENST00000323441 CD109Q6YHK3 1445 aa5.8□□□□□ -1.48
HIF1A-201ENST00000323441 CARMIL2Q6F5E8 1435 aa5.8□□□□□ -1.48
HIF1A-201ENST00000323441 YEATS2Q9ULM3 1422 aa5.79□□□□□ -1.48
HIF1A-201ENST00000323441 IGF1RP08069 1367 aa5.77□□□□□ -1.49
HIF1A-201ENST00000323441 CFAP74Q9C0B2 1584 aa5.76□□□□□ -1.49
HIF1A-201ENST00000323441 CTTNBP2Q8WZ74 1663 aa5.76□□□□□ -1.49
HIF1A-201ENST00000323441 FHOD3Q2V2M9 1422 aa5.75□□□□□ -1.49
HIF1A-201ENST00000323441 REREQ9P2R6 1566 aa5.75□□□□□ -1.49
HIF1A-201ENST00000323441 ZNF142P52746 1687 aaPredicted RBP5.74□□□□□ -1.49
HIF1A-201ENST00000323441 FANCAO15360 1455 aa5.74□□□□□ -1.49
HIF1A-201ENST00000323441 MAGI2Q86UL8 1455 aa5.74□□□□□ -1.49
HIF1A-201ENST00000323441 EFCAB5A4FU69 1503 aa5.74□□□□□ -1.49
HIF1A-201ENST00000323441 C3P01024 1663 aa5.74□□□□□ -1.49
HIF1A-201ENST00000323441 ALKQ9UM73 1620 aa5.74□□□□□ -1.49
HIF1A-201ENST00000323441 SETD1BQ9UPS6 1966 aaKnown RBP5.73□□□□□ -1.49
HIF1A-201ENST00000323441 MROH2AA6NES4 1674 aa5.72□□□□□ -1.49
HIF1A-201ENST00000323441 ZFYVE16Q7Z3T8 1539 aa5.72□□□□□ -1.49
HIF1A-201ENST00000323441 HSPA2P54652 639 aa5.71□□□□□ -1.5
HIF1A-201ENST00000323441 NCOA1Q15788 1441 aa5.71□□□□□ -1.5
HIF1A-201ENST00000323441 DMRT2Q9Y5R5 561 aa5.71□□□□□ -1.5
HIF1A-201ENST00000323441 POGZQ7Z3K3 1410 aa5.7□□□□□ -1.5
HIF1A-201ENST00000323441 HECW1Q76N89 1606 aa5.69□□□□□ -1.5
HIF1A-201ENST00000323441 AKNAQ7Z591 1439 aa5.68□□□□□ -1.5
HIF1A-201ENST00000323441 KIF27Q86VH2 1401 aa5.68□□□□□ -1.5
HIF1A-201ENST00000323441 ATP10BO94823 1461 aa5.68□□□□□ -1.5
HIF1A-201ENST00000323441 KDM5CP41229 1560 aa5.67□□□□□ -1.5
HIF1A-201ENST00000323441 DENND4BO75064 1496 aaPredicted RBP5.67□□□□□ -1.5
HIF1A-201ENST00000323441 CARMIL1Q5VZK9 1371 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms