RNA–Protein interactions for RNA: ENST00000323250.9

TYMS-202, Transcript of thymidylate synthetase, humanhuman

TSL 1 (best) BASIC

Gene TYMS, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TYMS-202ENST00000323250 PRG4Q92954 1404 aaPredicted RBP30.3■■■□□ 2.44
TYMS-202ENST00000323250 RUSC2Q8N2Y8 1516 aa30.29■■■□□ 2.44
TYMS-202ENST00000323250 TRHP20396 242 aaPredicted RBP30.24■■■□□ 2.43
TYMS-202ENST00000323250 KIAA0586Q9BVV6 1533 aa30.22■■■□□ 2.43
TYMS-202ENST00000323250 RAPGEF2Q9Y4G8 1499 aa30.06■■■□□ 2.4
TYMS-202ENST00000323250 IQGAP2Q13576 1575 aa29.95■■■□□ 2.39
TYMS-202ENST00000323250 PRXQ9BXM0 1461 aa29.91■■■□□ 2.38
TYMS-202ENST00000323250 TTBK1Q5TCY1 1321 aaPredicted RBP29.88■■■□□ 2.37
TYMS-202ENST00000323250 PTPRGP23470 1445 aa29.88■■■□□ 2.37
TYMS-202ENST00000323250 DISP1Q96F81 1524 aa29.86■■■□□ 2.37
TYMS-202ENST00000323250 ADCY10Q96PN6 1610 aa29.86■■■□□ 2.37
TYMS-202ENST00000323250 CARMIL2Q6F5E8 1435 aa29.86■■■□□ 2.37
TYMS-202ENST00000323250 TNIKQ9UKE5 1360 aa29.85■■■□□ 2.37
TYMS-202ENST00000323250 UGGT2Q9NYU1 1516 aa29.81■■■□□ 2.36
TYMS-202ENST00000323250 CSRNP3Q8WYN3 585 aa29.8■■■□□ 2.36
TYMS-202ENST00000323250 NPM1P06748 294 aaKnown RBP eCLIP29.78■■■□□ 2.36
TYMS-202ENST00000323250 CHIC1Q5VXU3 224 aa29.71■■■□□ 2.35
TYMS-202ENST00000323250 MAPKBP1O60336 1514 aa29.71■■■□□ 2.35
TYMS-202ENST00000323250 FAM9AQ8IZU1 332 aaPredicted RBP29.69■■■□□ 2.34
TYMS-202ENST00000323250 KIAA0556O60303 1618 aa29.69■■■□□ 2.34
TYMS-202ENST00000323250 CTTNBP2Q8WZ74 1663 aa29.68■■■□□ 2.34
TYMS-202ENST00000323250 ABCC10Q5T3U5 1492 aa29.67■■■□□ 2.34
TYMS-202ENST00000323250 FAM69CQ0P6D2 419 aa29.66■■■□□ 2.34
TYMS-202ENST00000323250 UACAQ9BZF9 1416 aa29.65■■■□□ 2.34
TYMS-202ENST00000323250 KIF13AQ9H1H9 1805 aa29.65■■■□□ 2.34
TYMS-202ENST00000323250 EEA1Q15075 1411 aa29.64■■■□□ 2.34
TYMS-202ENST00000323250 ABCC2Q92887 1545 aa29.63■■■□□ 2.33
TYMS-202ENST00000323250 UHRF1BP1LA0JNW5 1464 aa29.62■■■□□ 2.33
TYMS-202ENST00000323250 DIP2BQ9P265 1576 aa29.57■■■□□ 2.32
TYMS-202ENST00000323250 GOLGA3Q08378 1498 aa29.55■■■□□ 2.32
TYMS-202ENST00000323250 PLB1Q6P1J6 1458 aa29.52■■■□□ 2.32
TYMS-202ENST00000323250 ASXL2Q76L83 1435 aa29.52■■■□□ 2.32
TYMS-202ENST00000323250 KDM5BQ9UGL1 1544 aa29.5■■■□□ 2.31
TYMS-202ENST00000323250 P3H3Q8IVL6 736 aa29.5■■■□□ 2.31
TYMS-202ENST00000323250 ABCA8O94911 1581 aa29.42■■■□□ 2.3
TYMS-202ENST00000323250 RANGAP1P46060 587 aaPredicted RBP29.4■■■□□ 2.3
TYMS-202ENST00000323250 ZCCHC11Q5TAX3 1644 aaKnown RBP29.4■■■□□ 2.3
TYMS-202ENST00000323250 KIF21BO75037 1637 aa29.38■■■□□ 2.29
TYMS-202ENST00000323250 EHMT2Q96KQ7 1210 aa29.37■■■□□ 2.29
TYMS-202ENST00000323250 SAMD9Q5K651 1589 aa29.37■■■□□ 2.29
TYMS-202ENST00000323250 EPRSP07814 1512 aaKnown RBP29.33■■■□□ 2.29
TYMS-202ENST00000323250 GLI2P10070 1586 aa29.32■■■□□ 2.28
TYMS-202ENST00000323250 TSPOAP1O95153 1857 aa29.3■■■□□ 2.28
TYMS-202ENST00000323250 ARID3CA6NKF2 412 aa29.29■■■□□ 2.28
TYMS-202ENST00000323250 WDR7Q9Y4E6 1490 aa29.27■■■□□ 2.28
TYMS-202ENST00000323250 FHOD3Q2V2M9 1422 aa29.26■■■□□ 2.27
TYMS-202ENST00000323250 UBTFP17480 764 aaKnown RBP29.23■■■□□ 2.27
TYMS-202ENST00000323250 ATP10BO94823 1461 aa29.23■■■□□ 2.27
TYMS-202ENST00000323250 PPRC1Q5VV67 1664 aaKnown RBP29.22■■■□□ 2.27
TYMS-202ENST00000323250 KCNH8Q96L42 1107 aa29.2■■■□□ 2.26
TYMS-202ENST00000323250 MAP3K4Q9Y6R4 1608 aa29.17■■■□□ 2.26
TYMS-202ENST00000323250 KDM6BO15054 1643 aa29.16■■■□□ 2.26
TYMS-202ENST00000323250 RAPGEF6Q8TEU7 1601 aa29.14■■■□□ 2.26
TYMS-202ENST00000323250 NUP153P49790 1475 aaKnown RBP29.12■■■□□ 2.25
TYMS-202ENST00000323250 EFCAB5A4FU69 1503 aa29.12■■■□□ 2.25
TYMS-202ENST00000323250 COL17A1Q9UMD9 1497 aaPredicted RBP29.1■■■□□ 2.25
TYMS-202ENST00000323250 CD109Q6YHK3 1445 aa29.06■■■□□ 2.24
TYMS-202ENST00000323250 ARHGAP35Q9NRY4 1499 aa29.04■■■□□ 2.24
TYMS-202ENST00000323250 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.04■■■□□ 2.24
TYMS-202ENST00000323250 HNRNPUL2Q1KMD3 747 aaKnown RBP29.04■■■□□ 2.24
TYMS-202ENST00000323250 TEX14Q8IWB6 1497 aa29.03■■■□□ 2.24
TYMS-202ENST00000323250 MAGI3Q5TCQ9 1506 aa28.99■■■□□ 2.23
TYMS-202ENST00000323250 CFAP43Q8NDM7 1665 aa28.97■■■□□ 2.23
TYMS-202ENST00000323250 AEBP2Q6ZN18 517 aaPredicted RBP28.93■■■□□ 2.22
TYMS-202ENST00000323250 PLEKHD1A6NEE1 506 aa28.89■■■□□ 2.22
TYMS-202ENST00000323250 ABCA9Q8IUA7 1624 aa28.89■■■□□ 2.22
TYMS-202ENST00000323250 FMN1Q68DA7 1419 aa28.88■■■□□ 2.21
TYMS-202ENST00000323250 CDK13Q14004 1512 aaKnown RBP28.88■■■□□ 2.21
TYMS-202ENST00000323250 ATP1B4Q9UN42 357 aaPredicted RBP28.86■■■□□ 2.21
TYMS-202ENST00000323250 KDM4FA0A1W2PPD8 638 aa28.84■■■□□ 2.21
TYMS-202ENST00000323250 ARAP3Q8WWN8 1544 aa28.76■■■□□ 2.19
TYMS-202ENST00000323250 HECW1Q76N89 1606 aa28.76■■■□□ 2.19
TYMS-202ENST00000323250 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.74■■■□□ 2.192e-6■■□□□ 13
TYMS-202ENST00000323250 CLIP1P30622 1438 aa28.71■■■□□ 2.19
TYMS-202ENST00000323250 NEO1Q92859 1461 aa28.71■■■□□ 2.19
TYMS-202ENST00000323250 RAPGEF3O95398 923 aa28.7■■■□□ 2.18
TYMS-202ENST00000323250 PHLDB1Q86UU1 1377 aa28.7■■■□□ 2.18
TYMS-202ENST00000323250 TTC37Q6PGP7 1564 aa28.7■■■□□ 2.18
TYMS-202ENST00000323250 CASKIN1Q8WXD9 1431 aa28.67■■■□□ 2.18
TYMS-202ENST00000323250 LRRIQ1Q96JM4 1722 aa28.66■■■□□ 2.18
TYMS-202ENST00000323250 PCF11O94913 1555 aaKnown RBP28.65■■■□□ 2.18
TYMS-202ENST00000323250 CDK11AQ9UQ88 783 aaPredicted RBP28.63■■■□□ 2.17
TYMS-202ENST00000323250 ADGRL1O94910 1474 aa28.62■■■□□ 2.17
TYMS-202ENST00000323250 FANCAO15360 1455 aa28.61■■■□□ 2.17
TYMS-202ENST00000323250 TROQ12816 1431 aaPredicted RBP28.6■■■□□ 2.17
TYMS-202ENST00000323250 AKNAQ7Z591 1439 aa28.6■■■□□ 2.17
TYMS-202ENST00000323250 PLCH2O75038 1416 aa28.58■■■□□ 2.17
TYMS-202ENST00000323250 FRMPD1Q5SYB0 1578 aa28.58■■■□□ 2.17
TYMS-202ENST00000323250 KIF14Q15058 1648 aa28.58■■■□□ 2.17
TYMS-202ENST00000323250 LOC105371045A0A1W2PR82 267 aa28.55■■■□□ 2.16
TYMS-202ENST00000323250 FYCO1Q9BQS8 1478 aa28.53■■■□□ 2.16
TYMS-202ENST00000323250 DENND4BO75064 1496 aaPredicted RBP28.53■■■□□ 2.16
TYMS-202ENST00000323250 CCDC18Q5T9S5 1454 aa28.52■■■□□ 2.16
TYMS-202ENST00000323250 CEP162Q5TB80 1403 aa28.51■■■□□ 2.15
TYMS-202ENST00000323250 CFAP74Q9C0B2 1584 aa28.46■■■□□ 2.15
TYMS-202ENST00000323250 EFCAB2Q5VUJ9 269 aa28.46■■■□□ 2.15
TYMS-202ENST00000323250 SCAPERQ9BY12 1400 aa28.45■■■□□ 2.15
TYMS-202ENST00000323250 RICTORQ6R327 1708 aa28.45■■■□□ 2.14
TYMS-202ENST00000323250 MYO5CQ9NQX4 1742 aa28.41■■■□□ 2.14
TYMS-202ENST00000323250 POGZQ7Z3K3 1410 aa28.38■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms