RNA–Protein interactions for RNA: ENST00000322723.8

NCL-201, Transcript of nucleolin, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NCL, Length 4,034 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-201ENST00000322723 FYCO1Q9BQS8 1478 aa18.32■□□□□ 0.52
NCL-201ENST00000322723 THOC2Q8NI27 1593 aaKnown RBP18.3■□□□□ 0.52
NCL-201ENST00000322723 ADAMTS12P58397 1594 aa18.3■□□□□ 0.52
NCL-201ENST00000322723 GAPVD1Q14C86 1478 aa18.29■□□□□ 0.52
NCL-201ENST00000322723 SNAPC4Q5SXM2 1469 aa18.29■□□□□ 0.52
NCL-201ENST00000322723 MRC2Q9UBG0 1479 aa18.29■□□□□ 0.52
NCL-201ENST00000322723 FHAD1B1AJZ9 1412 aa18.28■□□□□ 0.52
NCL-201ENST00000322723 LRRC9Q6ZRR7 1453 aa18.27■□□□□ 0.52
NCL-201ENST00000322723 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.27■□□□□ 0.51
NCL-201ENST00000322723 DNAJC5BQ9UF47 199 aa18.26■□□□□ 0.51
NCL-201ENST00000322723 CASKIN1Q8WXD9 1431 aa18.25■□□□□ 0.51
NCL-201ENST00000322723 KANK4Q5T7N3 995 aaPredicted RBP18.23■□□□□ 0.51
NCL-201ENST00000322723 GRIN2BQ13224 1484 aa18.18■□□□□ 0.5
NCL-201ENST00000322723 CCER1Q8TC90 406 aaPredicted RBP18.18■□□□□ 0.5
NCL-201ENST00000322723 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.15■□□□□ 0.51e-23■□□□□ 10.8
NCL-201ENST00000322723 CLSPNQ9HAW4 1339 aa18.15■□□□□ 0.5
NCL-201ENST00000322723 ARHGEF11O15085 1522 aa18.14■□□□□ 0.5
NCL-201ENST00000322723 IFT140Q96RY7 1462 aa18.14■□□□□ 0.49
NCL-201ENST00000322723 CCNB3Q8WWL7 1395 aa18.14■□□□□ 0.49
NCL-201ENST00000322723 APLP2Q06481 763 aa18.13■□□□□ 0.49
NCL-201ENST00000322723 FHOD3Q2V2M9 1422 aa18.12■□□□□ 0.49
NCL-201ENST00000322723 FMN1Q68DA7 1419 aa18.12■□□□□ 0.49
NCL-201ENST00000322723 UGGT2Q9NYU1 1516 aa18.12■□□□□ 0.49
NCL-201ENST00000322723 IQGAP2Q13576 1575 aa18.11■□□□□ 0.49
NCL-201ENST00000322723 DHX57Q6P158 1386 aaKnown RBP18.1■□□□□ 0.49
NCL-201ENST00000322723 TDRD9Q8NDG6 1382 aaKnown RBP18.1■□□□□ 0.49
NCL-201ENST00000322723 EIF4G3O43432 1585 aaKnown RBP18.1■□□□□ 0.49
NCL-201ENST00000322723 TTBK1Q5TCY1 1321 aaPredicted RBP18.09■□□□□ 0.49
NCL-201ENST00000322723 MYT1Q01538 1121 aa18.07■□□□□ 0.48
NCL-201ENST00000322723 PHLDB1Q86UU1 1377 aa18.06■□□□□ 0.48
NCL-201ENST00000322723 EHBP1L1Q8N3D4 1523 aa18.04■□□□□ 0.48
NCL-201ENST00000322723 SUPT6HQ7KZ85 1726 aaKnown RBP18.03■□□□□ 0.48
NCL-201ENST00000322723 HECW1Q76N89 1606 aa18.03■□□□□ 0.48
NCL-201ENST00000322723 MAPKBP1O60336 1514 aa18.02■□□□□ 0.48
NCL-201ENST00000322723 MAGI3Q5TCQ9 1506 aa18■□□□□ 0.47
NCL-201ENST00000322723 RANGAP1P46060 587 aaPredicted RBP18■□□□□ 0.47
NCL-201ENST00000322723 CCDC18Q5T9S5 1454 aa18■□□□□ 0.47
NCL-201ENST00000322723 ZNF608Q9ULD9 1512 aaPredicted RBP17.99■□□□□ 0.47
NCL-201ENST00000322723 KIAA0556O60303 1618 aa17.99■□□□□ 0.47
NCL-201ENST00000322723 HNRNPUL2Q1KMD3 747 aaKnown RBP17.97■□□□□ 0.47
NCL-201ENST00000322723 TCOF1Q13428 1488 aaKnown RBP17.95■□□□□ 0.46
NCL-201ENST00000322723 MAGI1Q96QZ7 1491 aaPredicted RBP17.95■□□□□ 0.46
NCL-201ENST00000322723 DISP1Q96F81 1524 aa17.94■□□□□ 0.46
NCL-201ENST00000322723 KIAA0586Q9BVV6 1533 aa17.93■□□□□ 0.46
NCL-201ENST00000322723 GCC2Q8IWJ2 1684 aa17.93■□□□□ 0.46
NCL-201ENST00000322723 GRIN2AQ12879 1464 aa17.92■□□□□ 0.46
NCL-201ENST00000322723 FGD6Q6ZV73 1430 aa17.92■□□□□ 0.46
NCL-201ENST00000322723 CEP170Q5SW79 1584 aa17.91■□□□□ 0.46
NCL-201ENST00000322723 PTPN23Q9H3S7 1636 aa17.89■□□□□ 0.45
NCL-201ENST00000322723 SETD5Q9C0A6 1442 aa17.89■□□□□ 0.45
NCL-201ENST00000322723 NCOA2Q15596 1464 aa17.89■□□□□ 0.45
NCL-201ENST00000322723 ADCY10Q96PN6 1610 aa17.88■□□□□ 0.45
NCL-201ENST00000322723 EPRSP07814 1512 aaKnown RBP17.87■□□□□ 0.45
NCL-201ENST00000322723 RAB3GAP2Q9H2M9 1393 aa17.87■□□□□ 0.45
NCL-201ENST00000322723 RAPGEF6Q8TEU7 1601 aa17.86■□□□□ 0.45
NCL-201ENST00000322723 MYOM3Q5VTT5 1437 aa17.86■□□□□ 0.45
NCL-201ENST00000322723 SYNJ2O15056 1496 aa17.84■□□□□ 0.45
NCL-201ENST00000322723 NUP160Q12769 1436 aa17.84■□□□□ 0.45
NCL-201ENST00000322723 ZNF316A6NFI3 1004 aaPredicted RBP17.83■□□□□ 0.45
NCL-201ENST00000322723 AKNAQ7Z591 1439 aa17.82■□□□□ 0.44
NCL-201ENST00000322723 HFM1A2PYH4 1435 aa17.81■□□□□ 0.44
NCL-201ENST00000322723 PTPRKQ15262 1439 aa17.8■□□□□ 0.44
NCL-201ENST00000322723 NUP153P49790 1475 aaKnown RBP17.77■□□□□ 0.44
NCL-201ENST00000322723 P3H3Q8IVL6 736 aa17.77■□□□□ 0.44
NCL-201ENST00000322723 SCAF1Q9H7N4 1312 aaKnown RBP17.77■□□□□ 0.44
NCL-201ENST00000322723 MIA2Q96PC5 1412 aa17.77■□□□□ 0.43
NCL-201ENST00000322723 CDK13Q14004 1512 aaKnown RBP17.75■□□□□ 0.43
NCL-201ENST00000322723 DIEXFQ68CQ4 756 aaKnown RBP17.75■□□□□ 0.43
NCL-201ENST00000322723 ERCC6Q03468 1493 aa17.74■□□□□ 0.43
NCL-201ENST00000322723 CROCC2H7BZ55 1655 aa17.74■□□□□ 0.43
NCL-201ENST00000322723 DNMT1P26358 1616 aaKnown RBP17.74■□□□□ 0.43
NCL-201ENST00000322723 CENPBP07199 599 aaPredicted RBP17.73■□□□□ 0.43
NCL-201ENST00000322723 ABCA8O94911 1581 aa17.72■□□□□ 0.43
NCL-201ENST00000322723 SHROOM2Q13796 1616 aa17.72■□□□□ 0.43
NCL-201ENST00000322723 MTUS2Q5JR59 1369 aa17.72■□□□□ 0.43
NCL-201ENST00000322723 NAIPQ13075 1403 aa17.71■□□□□ 0.43
NCL-201ENST00000322723 ITSN2Q9NZM3 1697 aa17.71■□□□□ 0.43
NCL-201ENST00000322723 KDM5BQ9UGL1 1544 aa17.7■□□□□ 0.42
NCL-201ENST00000322723 UACAQ9BZF9 1416 aa17.68■□□□□ 0.42
NCL-201ENST00000322723 ADGBQ8N7X0 1667 aa17.68■□□□□ 0.42
NCL-201ENST00000322723 YTHDC1Q96MU7 727 aaKnown RBP17.67■□□□□ 0.42
NCL-201ENST00000322723 DENND4BO75064 1496 aaPredicted RBP17.67■□□□□ 0.42
NCL-201ENST00000322723 KDM6BO15054 1643 aa17.66■□□□□ 0.42
NCL-201ENST00000322723 CHD1O14646 1710 aa17.64■□□□□ 0.41
NCL-201ENST00000322723 TIMELESSQ9UNS1 1208 aa17.63■□□□□ 0.41
NCL-201ENST00000322723 CDC42BPAQ5VT25 1732 aa17.62■□□□□ 0.41
NCL-201ENST00000322723 GTF3C3Q9Y5Q9 886 aa17.6■□□□□ 0.41
NCL-201ENST00000322723 KIF14Q15058 1648 aa17.6■□□□□ 0.41
NCL-201ENST00000322723 ROCK1Q13464 1354 aa17.59■□□□□ 0.41
NCL-201ENST00000322723 TROQ12816 1431 aaPredicted RBP17.57■□□□□ 0.4
NCL-201ENST00000322723 ADGRL2O95490 1459 aa17.55■□□□□ 0.4
NCL-201ENST00000322723 FAM50AQ14320 339 aaKnown RBP17.55■□□□□ 0.4
NCL-201ENST00000322723 ABCC10Q5T3U5 1492 aa17.55■□□□□ 0.4
NCL-201ENST00000322723 DAPK1P53355 1430 aa17.54■□□□□ 0.4
NCL-201ENST00000322723 PLB1Q6P1J6 1458 aa17.54■□□□□ 0.4
NCL-201ENST00000322723 ABCC5O15440 1437 aa17.51■□□□□ 0.39
NCL-201ENST00000322723 CARMIL2Q6F5E8 1435 aa17.5■□□□□ 0.39
NCL-201ENST00000322723 GPATCH8Q9UKJ3 1502 aaKnown RBP17.5■□□□□ 0.39
NCL-201ENST00000322723 CAMSAP2Q08AD1 1489 aa17.49■□□□□ 0.39
NCL-201ENST00000322723 ITGAEP38570 1179 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms